Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00938 CAAATCGCTATTATCCGACGTGGCTTCCTTTCCTCGGCTCCGGTGACCACCACCGACGATACGCCGCCGTATCGCCACCTACTACATCAATAGTAACGCCATCAGGCTATTAAAATAATAACGAATTCCGCAGACTTTTGAAAATCTGTCATTTCGCATCCGTTTTTCTGCTAGGGTTTTTGCGTTTTGAAGCTTCTCCTTTTTCGTTTTTTTGTCGCCATTTCTTCTTCGATCAGCGAAGAAGCTATACGATCATGGCCTTCTCATCCTCCTTCGCTCGATCTGCCATTTCCTCTTCTCTGATCGAAGCTTCTCGTTCTGACTTGTCGCCGTCTAACTGCCGGAAGGCTTCATGCGTCGGGAGCTCTTTAAAGCTTCAATCTGGTGTTTTTGGAACTGCTGTCTCGAATGGGGCGTCTTCTTTACAGTTAAGGTCATCTAAAAGTCGAACTGTCCAACCCATCAAAGCTACGGCCACCGAGGCGCCTCCGACGATCCAAAAAACTCCGAGCAGTGGGAAGACCAAGATAGGAATCAATGGTTTTGGTCGAATTGGAAGACTGGTATTGCGAATTGCAACCTCCAGAGATGATATCGATGTTGTAGCAGTTAATGATCCATTTGTTGACGCCAAGTACATGGCTTACATGTTCAAATACGATTCTACCCATGGTGTTTTTAACGGAACCATCAAGGTTCTCAGTGATTCAACCTTGGAAATTAATGGGAAGCAGATCAAAGTTGTAAGCAAAAGGGACCCTGCAGATATCCCTTGGGGTGATTATGGGGCCGAATATGTTGTTGAGTCCTCTGGAGTTTTCACTACTAAAGAGAAGGCTTCAGCACACCTGAAGGGTGGTGCTAAGAAAGTTGTAATCTCAGCTCCATCAGCTGATGCACCTATGTTTGTAGTTGGTGTTAACGAAAAAACTTATAAGCCGACAATGGATATTGTTTCCAATGCAAGTTGTACAACCAATTGTCTTGCACCTCTCGCAAAGGTTGTTCATGAGGAATTTGGCATTGTTGAAGGTCTAATGACTACAGTGCATGCAACAACAGCAACACAAAAGACTGTCGATGGCCCTTCAATGAAGGATTGGAGAGGAGGCCGTGGGGCTGCACAAAATATAATTCCTAGCTCTACTGGTGCTGCCAAGGCTGTTGGCAAAGTTCTTCCGGAGCTAAATGGAAAGCTTACTGGAATGGCTTTCCGCGTCCCAACTCCCAATGTATCTGTTGTGGACTTAACTTGCCGACTTCAAAAGAGTGCTTCTTATGAAGATGTGAAGGCAGCAGTAAAATATGCATCCGAAGGTCCATTGAAAGGCATTCTTGGATATACCGATGAGGATGTTGTCTCTACAGATTTTCTTGGGGATTCGAGATCAAGTATTTTTGATGCAAAGGCTGGAATAGGTCTCAGTGCCTCATTCGTGAAGCTGGTGACTTGGTACGACAATGAATGGGGATACAGCAACCGAGTACTGGACCTTATTGAGCACATGGCAATGGTTTCAGCCTTCAATTAAATGACAGTGTCTTGTCATCGGCAAAGCCCCGAGCAGTTCTTGTGATTTTTGATCGTAAGTAGTTGGTTGAAGTGAGATAGGTTTCTATTTTTTTTTTTCTTGGAATGGAATCATTCGGTTGCTTGTGTAGAACAGTAGAAGCTAGTTTAAAATAAGGAATATTTGACATGTAAACGAGTTCATTCTTCCAGTTTAACATATCTGGACCCGGCAGATTCAATACAAGTAATTGTGGAAGAACCTTTCGGTCGTTTATCTTC 1792 43.97 MAFSSSFARSAISSSLIEASRSDLSPSNCRKASCVGSSLKLQSGVFGTAVSNGASSLQLRSSKSRTVQPIKATATEAPPTIQKTPSSGKTKIGINGFGRIGRLVLRIATSRDDIDVVAVNDPFVDAKYMAYMFKYDSTHGVFNGTIKVLSDSTLEINGKQIKVVSKRDPADIPWGDYGAEYVVESSGVFTTKEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKTYKPTMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLQKSASYEDVKAAVKYASEGPLKGILGYTDEDVVSTDFLGDSRSSIFDAKAGIGLSASFVKLVTWYDNEWGYSNRVLDLIEHMAMVSAFN 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19193420 19198077 - XM_039044641.1 Bhi10g00938 47279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00938 425 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 238 401 - -
Bhi10g00938 425 SMART gp_dh_n_7 90 239 IPR020828 GO:0051287
Bhi10g00938 425 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 9 423 IPR020831 GO:0016620
Bhi10g00938 425 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 91 192 IPR020828 GO:0051287
Bhi10g00938 425 Gene3D - 91 418 - -
Bhi10g00938 425 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 244 401 IPR020829 GO:0016620
Bhi10g00938 425 Gene3D Dihydrodipicolinate Reductase; domain 2 239 405 - -
Bhi10g00938 425 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 198 211 IPR020831 GO:0016620
Bhi10g00938 425 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 233 251 IPR020831 GO:0016620
Bhi10g00938 425 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 260 276 IPR020831 GO:0016620
Bhi10g00938 425 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 317 334 IPR020831 GO:0016620
Bhi10g00938 425 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 357 372 IPR020831 GO:0016620
Bhi10g00938 425 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 9 423 - -
Bhi10g00938 425 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 237 244 IPR020830 GO:0016620
Bhi10g00938 425 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 91 413 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Bhi10g00938 425 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 89 255 IPR036291 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01995 Bhi10g00938 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01716 Bhi-Chr8:48158143 Bhi10g00938 Bhi-Chr10:19193420 0 dispersed
Bhi08g01717 Bhi-Chr8:48162714 Bhi10g00938 Bhi-Chr10:19193420 0 dispersed
Bhi09g02843 Bhi-Chr9:75358129 Bhi10g00938 Bhi-Chr10:19193420 2.36E-111 dispersed
Bhi01g01845 Bhi-Chr1:39842094 Bhi10g00938 Bhi-Chr10:19193420 1.76E-107 transposed
Bhi04g02394 Bhi-Chr4:65505700 Bhi10g00938 Bhi-Chr10:19193420 0 transposed
Bhi10g00938 Bhi-Chr10:19193420 Bhi05g01995 Bhi-Chr5:61479378 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00938 K00134 - csv:101203472 786.178