Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00963 TTTCTTTCACTTCTAAAAAACCTCTAACTCGTATTTCCAAAATCCGATTATATCACAAAATTGGGTAGTGATTTTAAACTATCTCAATTTGCATTCTTTAAAGAGAAATGAAGGAGATTAATGGAAGAAAACAAGGCACATCTCTTTCGCCATGTGCAGCTTGTAAGCTTCTTCGTCGTAGATGTGCTCAAGATTGTGTTTTCGCCCCTTATTTTCCTGCTGACGAGCCTCATAAATTTGCTAGCGTCCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTGCAGGAGCTACCAGAGCAACAACGAAGCGATGCAGTCAGTTCAATGGTGTACGAGGCAAACGCAAGGGTACGAGATCCAGTATACGGTTGCGTTGGAGCCATATCGTCACTACAACAACAGATCGATGTCTTGCAAACACAACTGGCAATAGCGCAGGCGGAAGTGGTTCACATGCGGATGCGCCAATTCCCGTCGTCCTCCTGCAACCTGACCATCGGCCACTCGCCAGAAACTGCCTCACCGTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTATGGTCGTCGTGCTAGCTAGCTAAATTAATTTAAGCTTTTAGGCGTGCGTCTTTTGCCTTCACATTTTTTTTCCTTCTTAATTTTCCTAATTATCATTATAATGTGCTTTTCTTTATCATTATAATGGGGCTTGCTTTATTGTACGTTTGCTTTTATTAATACTTTTTTTTCCCTTCTTTGGCTCTTTATTTATATGTAACTACTTTGTAGAAAAGAAAACAGCGCTACGCGGAGAGATCATTATGATGATTATTGATAACCATATTGT 882 41.27 MKEINGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHMRMRQFPSSSCNLTIGHSPETASPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19755429 19757987 - XM_039046205.1 Bhi10g00963 47304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00963 173 Coils Coil 94 114 - -
Bhi10g00963 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 169 - -
Bhi10g00963 173 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Bhi10g00963 173 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Bhi10g00963 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 3 169 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g02025 Bhi10g00963 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00845 Bhi-Chr10:17099147 Bhi10g00963 Bhi-Chr10:19755429 3.59E-54 dispersed
Bhi04g00518 Bhi-Chr4:12881923 Bhi10g00963 Bhi-Chr10:19755429 1.93E-23 transposed
Bhi04g02264 Bhi-Chr4:62047280 Bhi10g00963 Bhi-Chr10:19755429 7.75E-51 transposed
Bhi07g00472 Bhi-Chr7:20663568 Bhi10g00963 Bhi-Chr10:19755429 2.74E-52 transposed
Bhi07g01035 Bhi-Chr7:33855581 Bhi10g00963 Bhi-Chr10:19755429 2.27E-51 transposed
Bhi08g00274 Bhi-Chr8:10630356 Bhi10g00963 Bhi-Chr10:19755429 3.68E-53 transposed
Bhi08g00916 Bhi-Chr8:30291794 Bhi10g00963 Bhi-Chr10:19755429 8.43E-81 transposed
Bhi10g00583 Bhi-Chr10:12863761 Bhi10g00963 Bhi-Chr10:19755429 1.32E-52 transposed
Bhi10g01373 Bhi-Chr10:32911985 Bhi10g00963 Bhi-Chr10:19755429 6.58E-22 transposed
Bhi01g01363 Bhi-Chr1:27429231 Bhi10g00963 Bhi-Chr10:19755429 1.56E-30 transposed
Bhi10g00963 Bhi-Chr10:19755429 Bhi05g02025 Bhi-Chr5:62169715 6.85E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2152 PF03195 LOB 1.60E-43 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00963 - - csv:101220394 335.495