Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01014 GCCTCATTCTCTTGATACCGCATATTAAGCGTTTTATCACTTACCACCTTCTCTCATTCCTCCTCTTCCGCACGTTGTTTCGCTGCTCTGTGCTCCTCTAATCTTCTCTGCAGGCTCAAGGGGAGTGCCTTCCTTTCCTCTCCCTTCATCGCTCCTCAGTTTATAGTCCTCTTATTCCTCGGATATTGTCAGGTTTTTTGAAGACTTGTCAAGATGGTGAAGTTTACAGCAGAGGAGCTTCGTCGGATCATGGACTTTAAGCATAACATTCGTAATATGTCTGTTATTGCTCACGTCGATCACGGGAAGTCGACACTTACAGACTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCTGGTGATGTACGAATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGAATCTCCCTCTACTATGAGATGTCTGATGAATCCTTGAAAAGTTACAAGGGAGAGAGACAGGGAAATGAGTATCTCATCAATCTTATTGATTCACCTGGGCACGTTGACTTCTCATCTGAGGTTACAGCTGCTTTGCGTATTACTGATGGTGCCCTTGTTGTTGTGGATTGCATTGAAGGTGTTTGTGTCCAAACAGAGACCGTGCTCCGTCAAGCTTTGGGAGAGAGGATTAGACCTGTGTTGACTGTTAACAAGATGGATAGGTGCTTCCTTGAACTTCAAGTGGATGGAGAAGAGGCTTATCAAACATTCCAGAGGGTCATAGAGAATGCCAATGTGATTATGGCCACATATGAGGATCCACTTCTTGGTGATGTTCAAGTGTACCCGGAGAAAGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCATTTACCCTGACTAACTTTGCCAAGATGTACGCCTCCAAGTTTGGAGTAGATGAGGCGAAGATGATGGAGAGACTTTGGGGTGAGAACTTCTTTGATCCTGCAACCAAGAAGTGGACCAGCAAGAACACTGGGTCTGCAACATGCAAGCGTGGGTTTGTCCAGTTCTGCTACGAACCTATCAAGCAGATCATTGCAACTTGCATGAACGATCAGAAGGATAAGCTATGGCCCATGTTGCAGAAGCTTGGTGTTGTCATGAAGTCTGATGAGAAGGATCTGATGGGCAAAGCGTTGATGAAGCGGGTCATGCAAACATGGCTCCCAGCAAGTTCTGCTCTTTTGGAAATGATGATCTTTCATCTTCCATCTCCCGCCAAGGCTCAAAAATACCGTGTTGAGAATTTGTACGAGGGTCCACTAGATGATGCTTACGCAAGTGCCATTAGAAATTGTGACCCTGAAGGACCTCTTATGCTTTATGTATCGAAGATGATTCCTGCATCTGACAAGGGANTCTTTGCCTTTGGACGTGTCTTCTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATCNATGGCCCAAACTATGTTCCTGGAGAGAAGAAAGACTTGTATGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTGCCTNTGGGTAACACTGTTGCCATGGTCGGGTTGGATCAATTTATCACGAAGAATGCTACTCTAACAAACGAGAAGGAAGTTGATGCCCATCCAATTCGAGCCATGAAATTTTCTGTATCTCCTGTGGTGCGTGTGGCAGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTTGTGGAAGGCCTTAAANCTCTGGCGAAGTCAGATCCTATGGTTGTGTGTACCATGNGAGAGTCTGGTGAGCACATTGTTGCTGGTGCTGGAGAACTACATCTTGAGATCTGTCTGAAGGATTTGCAAGAGGATTTCATGGGTGGAGCTGAGATTATAAAATCTGACCCTGTGTTCTCCTTCCGTGAAACTGTCCTTGAGNAGTCATGCCGCACAGTGATGAGTAAATCCCCCAACAAACACAATCGTCTGTACATGGAAGCACGACCCATGGAGGATGGCNTGGCAGAGGCTATTGATGATGGTCGCATTGGACCACGAGATGATCCTAAGNTTAGGTCTAAAATCTTGTCGGAGGAGTTCGGATGGGACAAAGATCTTGCCAAAAAGATTNTGTGCTTTGGTCCTGAGACTACCGGCCCTAATATGGTGGTTGATATGTGTAAGGGAGTTCAGTACCTGAATGAAATCAAGGATTCTGTTGTCGCTGGTTTCCAATGGGCGTCGAAAGAAGGTCAATTGGCCGAAGAAAACATGAGAGGCATCTGCTTTGAAGTTTGTGATGTGGTGCTTCATGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCGACGGCTAGGAGGGTGATCTATGCTTCTCAGCTGACTGCCAAACCAAGACTTCTCGAGCCTGTGTACCTAGTGGAGATTCAGGCTCCCGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAGCGTGGGCACGTCTTTGAGGAAATGCAGAGGCCCGGTACCCCACTCTACAACATCAAGGCGTATCTCCCTGTCATCGAGTCCTTTGGGTTCTCGAGCACATTGAGAGCAGCAACTTCTGGGCAGGCATTCCCACAGTGTATGTTTGACCATTGGGACATGATGTCGTCAGATCCATTGGAATCTGGTACCCAGGCTGCGCAGCTAGTTGCAGATATCCGCAAGAGGAAGGGATTGAAGGAACAGATGACTCCATTGTCCGAGTTTGAGGACAAGCTGTAGATCGCACTCGTGTCGTATTGTTCGTCAATATTTAAGAAGCGCTCATATATCCGCAGGTGTGAGGTTCTAATTTCCCATGGGAAGTTTTTTGTTTCTAGAAAAGATTGTTATGTTTGACTATTTTATTTGCAATTATTTTTATCAACTGTTGTTACTCTCCATTTCTGTTAAAGATGCGTGATGATGGGCAAAATTTTTGGAGTCTGCAGGATTTTCCTTTGGTA 2966 45.95 MVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTSKNTGSATCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSDEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPAKAQKYRVENLYEGPLDDAYASAIRNCDPEGPLMLYVSKMIPASDKGXFAFGRVFSGKVSTGLKVRIXGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPXGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKXLAKSDPMVVCTMXESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVFSFRETVLEXSCRTVMSKSPNKHNRLYMEARPMEDGXAEAIDDGRIGPRDDPKXRSKILSEEFGWDKDLAKKIXCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGQLAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCMFDHWDMMSSDPLESGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20473491 20477398 - XM_039044729.1 Bhi10g01014 47355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01014 842 Pfam Elongation factor Tu domain 2 390 466 IPR004161 GO:0005525
Bhi10g01014 842 SMART EFG_IV_2 605 721 IPR005517 GO:0005525
Bhi10g01014 842 Gene3D Translation factors 343 483 - -
Bhi10g01014 842 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 PRINTS GTP-binding elongation factor signature 101 111 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 PRINTS GTP-binding elongation factor signature 117 128 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 PRINTS GTP-binding elongation factor signature 153 162 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 CDD EF2_snRNP_III 486 558 - -
Bhi10g01014 842 SUPERFAMILY EF-G C-terminal domain-like 726 837 IPR035647 -
Bhi10g01014 842 Gene3D - 3 237 IPR027417 -
Bhi10g01014 842 Gene3D Elongation Factor G (Translational Gtpase), domain 3 485 561 - -
Bhi10g01014 842 Pfam Elongation factor G C-terminus 723 810 IPR000640 -
Bhi10g01014 842 SUPERFAMILY EF-G C-terminal domain-like 483 559 IPR035647 -
Bhi10g01014 842 SMART EFG_C_a 723 812 IPR000640 -
Bhi10g01014 842 CDD eEF2_snRNP_like_C 726 804 - -
Bhi10g01014 842 CDD EF2 20 230 - -
Bhi10g01014 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 341 IPR027417 -
Bhi10g01014 842 SUPERFAMILY Translation proteins 342 475 IPR009000 -
Bhi10g01014 842 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 841 - -
Bhi10g01014 842 CDD EF2_II 375 469 - -
Bhi10g01014 842 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 344 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 Gene3D - 722 842 - -
Bhi10g01014 842 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Bhi10g01014 842 SUPERFAMILY Ribosomal protein S5 domain 2-like 562 725 IPR020568 -
Bhi10g01014 842 Pfam Elongation factor Tu GTP binding domain 17 342 IPR000795 GO:0003924|GO:0005525
Bhi10g01014 842 Pfam Elongation Factor G, domain III 486 548 IPR041095 -
Bhi10g01014 842 TIGRFAM small_GTP: small GTP-binding protein domain 20 176 IPR005225 GO:0005525
Bhi10g01014 842 CDD aeEF2_snRNP_like_IV 558 730 - -
Bhi10g01014 842 Pfam Elongation factor G, domain IV 609 721 IPR005517 GO:0005525
Bhi10g01014 842 Gene3D - 569 721 IPR014721 -
Bhi10g01014 842 PANTHER - 1 841 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01014 Bhi-Chr10:20473491 Bhi06g00417 Bhi-Chr6:9420889 1.81E-22 dispersed
Bhi10g01011 Bhi-Chr10:20392433 Bhi10g01014 Bhi-Chr10:20473491 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01014 K03234 - csv:101209544 1632.46