Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01055 ATGAAAATTACACGAAGCAATGAACCTCGACCCGGATCTCTCAACTCTCATTCCTGAGGGAGAGAGATAAAACCGACCCTCTAGAGGGAGAAGAAGAAGAAGAACCAGAGGCAAAAATGGCGATTCGTATTTGACAGTCGAGTTTCAAACGATGTGAATTTTCCCTCTTTCATCCATGCGGCGAGGCAGACCCTCAGATCCATTTACAGCTACAGAAATACCCAAATCGACCATTCAACCTGAAAATCCTCTCAAGGAGATCCGTTACAGAGGCGTTCGTAAGCGTCCTTGGGGTAGATACGCGGCTGAGATCAGAGATCCTTGGAAGAAAACTAGGGTTTGGCTTGGTACCTTTGATTCCGCTGAAGAGGCTGCTCGGGCTTACGATAATGCCGCTCGGACCCTCCGTGGTGCTAAGGCCAAAACTAACTTTCCTTTACATCCATCGACGATTTCCATTCAACAACAAATTCCTTTCTACCAATCGCCGCCGGATTTGCACGATTCGAATGGATTTGGTGGGAAGATTGAGTGTGTTCAGGCTAATAGGCCTACATCGAGCAGTTTGAGTTCTACCGTGGAGTCGTTTAGTGGGCCCCGGATTTCTAACCCTTTGTCGTCGCTGTCTATGGTTCGTCGGAGGCCGGTGCAGCCAGTTTCGCCGGATGATTGCCATAGCGACTGTGATTCGTCTTCCTCGGTTGTTGATGATGATGAGGTCTGTGTTCTTGCTTCTTTCCGTAGAGCCTTGCCCTTTGATCTTAACTTACCGCCTCCGATGGACGTCGTGGATTTAACTGGTGATGATCTTCAAGCTACTGCTTTATGCCTCTGATGAATGATGACACCGTGGTTGCTTTATATCATCGTGGTTTGAAATGGTCCTTTTTTTTTTCCACATTTCTTCTGTTTTTTCTATCTTATTTTCTCGGGAAAAACACTAAACTGAAGAATTTTCGAATATGGTGGTAAGTTGAAGAGAAATTTGATCGGCCTCCTTCCCACTCTTCCCTTTTTACTTTGTTAGACTTTTTAGAACTGGGTTCCCTTCGACGACCATGGGCTATAAAATGTTGTCTGTATCATTGAAGCTTTTTAGCATCGTTTAAGTTGGCTGTGTATCCGATCTGGGATTTTCCTTTCTTGATCTGATTCACATCATCAAATCCTTACTTCTGTACAAAGAATTTACTCATCTAATTTAAAGAATCTGCAGTGTTCTAATTGCCATAAAA 1235 44.29 MRRGRPSDPFTATEIPKSTIQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDNAARTLRGAKAKTNFPLHPSTISIQQQIPFYQSPPDLHDSNGFGGKIECVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDEVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 21193586 21194909 - XM_039046675.1 Bhi10g01055 47396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01055 219 Coils Coil 63 83 - -
Bhi10g01055 219 CDD AP2 30 87 IPR001471 GO:0003700|GO:0006355
Bhi10g01055 219 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Bhi10g01055 219 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Bhi10g01055 219 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Bhi10g01055 219 MobiDBLite consensus disorder prediction 1 26 - -
Bhi10g01055 219 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Bhi10g01055 219 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 26 194 - -
Bhi10g01055 219 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Bhi10g01055 219 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Bhi10g01055 219 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Bhi10g01055 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 26 194 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g02092 Bhi10g01055 CCT
Bhi05g02092 Bhi10g01055 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00689 Bhi-Chr4:16330312 Bhi10g01055 Bhi-Chr10:21193586 5.43E-28 dispersed
Bhi07g01791 Bhi-Chr7:48864719 Bhi10g01055 Bhi-Chr10:21193586 8.63E-26 dispersed
Bhi08g02272 Bhi-Chr8:64862465 Bhi10g01055 Bhi-Chr10:21193586 6.74E-32 dispersed
Bhi10g01055 Bhi-Chr10:21193586 Bhi03g01417 Bhi-Chr3:29582264 7.70E-26 dispersed
Bhi02g00022 Bhi-Chr2:481689 Bhi10g01055 Bhi-Chr10:21193586 2.77E-20 transposed
Bhi09g03458 Bhi-Chr9:87434055 Bhi10g01055 Bhi-Chr10:21193586 2.95E-35 transposed
Bhi11g00585 Bhi-Chr11:13309705 Bhi10g01055 Bhi-Chr10:21193586 2.69E-49 transposed
Bhi10g01055 Bhi-Chr10:21193586 Bhi05g02092 Bhi-Chr5:63822404 5.09E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2161 PF00847 AP2 4.20E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01055 K09286 - csv:101221703 406.757