Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01056 ATTGGGAAAAGAGAGGGGGAAAAAAAAAAGAAAAGAAAAGAAAAGAAAGTAAAAAAAAAAAAAAAAAGGAATTTATCGAATTGGAATAATAGTGGATTTCACATTGATTCTTCACAATCTATCCGCGATTCCCTTCTCGCCTTAGTTCCTTATAAAATTTCTAAATTGGTTTCTCTCATCAATTTCAGACTCAGATCATCTTTGTTATTCGCGGAAGATCATACCATTAATTAATTTTTTTTTTTTTTTGCTTTTTTAAAAGGAATTTTTGGGGGATTTGAGAGGGTTTCTTTTTTTGTTTTTTGTTTTGTTTTTAGTTTTATAATCTTTCTCTGAATTTTCCCGGGAGATTTGAGGAGGTTCTTCAGCTTGATTGGTTGGATTTGAAAAGCATTTGAAGGGTTTTTTTTTTAATATCTACTACCGATGCCAGATAATCTGCAAGTTCAGAGGAATGCTGGTCCTAACCAATCCCCTGATATCTCAGAGGCGCTATGGCGGTTAGAAATCAGTGATAATCAAGATGGAGGCGATGCGGCTGAATCAAGCCCTTACCCCGATCGACCTGGGGAACCTGATTGCTTATATTATATGAGAACTGGGTCTTGTAGCTATGGAAGTAATTGTCGTTTTAATCATCCTGTTTACGTTGCTCAGGGTGCTCTGTATAATGGGGAACTTCCAGAAAGAATTGGGCAGCCCGACTGTGAGTATTTTCTGAAGACAGGGACCTGTAAATATGGAGGATCATGTAAGTATCATCATCCAAGAGATAGGCGTGGAGCTGGGCCTGTTACATTTAATATTTTAGGCCTTCCAATGAGACAGGAAGAAAAATCGTGCCCTTATTATTTGCGCACTGGATCATGTAAATTTGGAGTTTCGTGCAAGTTCAATCATCCCCAGCCATCACCAGTTGGAACTATGTTACCTCAAGCTAGACCTGGTGCTTTGGGTTCTGCAGGCACTCCATTCATGCCTTCATCTGGTGTGCCATATACTGGTGGAATTCCTGCTTGGTCATTACCTAGAGTACAATATATGCCCGGTCCATGTGTACAAGGCCAACAATCTTATGTGCCTGTCTTGGTTTCTCCTTCACAGGGTGCCATAGCTGCTCAAGACTGGAATACTTACGTGGGCAATGTCAGTCCTATTCTTCCCAATCTTGGTTACAATTCTGTCAATTTGGAAGAGTCATATTCTAATGGGCAGTTGGCCTTATCAACATCTACTCCAACACTACCTGATCGACCTGATCAACCAGAATGCCGTTATTTTATGAACAATGGCACCTGCAAGTATGGATCTGATTGCAAATTCCATCATCCAAAACAAAGAATTGCACAATCAGCGACAAATGCACTCGGACTTCCTTCAAGACCCGGACAAGCTATATGTTCATACTACAATATGTATGGGCTCTGCAAGTATGGCCCAAGTTGTAAATTTGATCACCCATCTGCAACATATCCTTATAATTATGGCTTCACTCTGCCTGTGCTTGATTCATCTTTTATGAAGTATCCCAGCAACAACTTCACAATGTCTTCACACGAGACCTTGCCCCAGACGTTATCTAAATCTTCTGAATGGGTTCAGAAAGCCGATCCATCAAACAACAAACGCCGAACTACCGATTCAAAAATCGTAGCAGATGGCACAGCTGAAGAGGTGACCTCTGTTTCATGCTCATTACCAGGTGGTTCAGAGACTTTACAAGATCAATCTGGTTGAAACTTTTGCTTATTTTGTTCATTTTGACTCTGTTGTTTAGTATGTTGTCAAGGAATTACAAATTTTCTTACTTTATACCTCCTATGCCCCAATTTCACCTGTCATAAATGTGGAGTGGAAACAAGTTGCTTGGAGATTTATTTACATGAGTAAGCTGTGGGGCAAGGGAAGGCATTTTTTGTGTTGAATAAAGTGCAGGTGAAATTAAAAACAATCCCTCCCTTTTTTTTCTTTCTTTTTTGCCGTTTACCCTTTCTCATTTATGAGATGGGACTTGAATTTAAGTTTGCAATCGGATGAGATTTTGTT 2046 39.54 MPDNLQVQRNAGPNQSPDISEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVAQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPMRQEEKSCPYYLRTGSCKFGVSCKFNHPQPSPVGTMLPQARPGALGSAGTPFMPSSGVPYTGGIPAWSLPRVQYMPGPCVQGQQSYVPVLVSPSQGAIAAQDWNTYVGNVSPILPNLGYNSVNLEESYSNGQLALSTSTPTLPDRPDQPECRYFMNNGTCKYGSDCKFHHPKQRIAQSATNALGLPSRPGQAICSYYNMYGLCKYGPSCKFDHPSATYPYNYGFTLPVLDSSFMKYPSNNFTMSSHETLPQTLSKSSEWVQKADPSNNKRRTTDSKIVADGTAEEVTSVSCSLPGGSETLQDQSG 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 21255247 21259521 - XM_039045551.1 Bhi10g01056 47397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01056 436 Gene3D - 274 353 - -
Bhi10g01056 436 Gene3D - 45 122 - -
Bhi10g01056 436 SUPERFAMILY CCCH zinc finger 322 347 IPR036855 GO:0046872
Bhi10g01056 436 MobiDBLite consensus disorder prediction 395 409 - -
Bhi10g01056 436 SUPERFAMILY CCCH zinc finger 93 117 IPR036855 GO:0046872
Bhi10g01056 436 ProSiteProfiles Zinc finger C3H1-type profile. 46 74 IPR000571 GO:0046872
Bhi10g01056 436 ProSiteProfiles Zinc finger C3H1-type profile. 88 116 IPR000571 GO:0046872
Bhi10g01056 436 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 321 345 IPR000571 GO:0046872
Bhi10g01056 436 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 91 115 IPR000571 GO:0046872
Bhi10g01056 436 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 137 160 IPR000571 GO:0046872
Bhi10g01056 436 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 48 72 IPR000571 GO:0046872
Bhi10g01056 436 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 278 303 IPR000571 GO:0046872
Bhi10g01056 436 MobiDBLite consensus disorder prediction 416 436 - -
Bhi10g01056 436 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26 6 406 - -
Bhi10g01056 436 ProSiteProfiles Zinc finger C3H1-type profile. 319 347 IPR000571 GO:0046872
Bhi10g01056 436 ProSiteProfiles Zinc finger C3H1-type profile. 133 161 IPR000571 GO:0046872
Bhi10g01056 436 SUPERFAMILY CCCH zinc finger 280 304 IPR036855 GO:0046872
Bhi10g01056 436 SUPERFAMILY CCCH zinc finger 132 161 IPR036855 GO:0046872
Bhi10g01056 436 MobiDBLite consensus disorder prediction 1 21 - -
Bhi10g01056 436 SMART c3hfinal6 319 346 IPR000571 GO:0046872
Bhi10g01056 436 SMART c3hfinal6 46 73 IPR000571 GO:0046872
Bhi10g01056 436 SMART c3hfinal6 276 303 IPR000571 GO:0046872
Bhi10g01056 436 SMART c3hfinal6 135 160 IPR000571 GO:0046872
Bhi10g01056 436 SMART c3hfinal6 88 115 IPR000571 GO:0046872
Bhi10g01056 436 PANTHER PROTEIN PHOSPHATASE RELATED 6 406 - -
Bhi10g01056 436 MobiDBLite consensus disorder prediction 383 436 - -
Bhi10g01056 436 ProSiteProfiles Zinc finger C3H1-type profile. 276 304 IPR000571 GO:0046872
Bhi10g01056 436 MobiDBLite consensus disorder prediction 1 17 - -
Bhi10g01056 436 SUPERFAMILY CCCH zinc finger 51 73 IPR036855 GO:0046872
Bhi10g01056 436 Gene3D - 123 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01343 Bhi-Chr2:33773294 Bhi10g01056 Bhi-Chr10:21255247 2.89E-94 dispersed
Bhi05g01974 Bhi-Chr5:60868876 Bhi10g01056 Bhi-Chr10:21255247 3.56E-11 dispersed
Bhi05g01975 Bhi-Chr5:60868876 Bhi10g01056 Bhi-Chr10:21255247 3.33E-11 dispersed
Bhi08g01694 Bhi-Chr8:47846518 Bhi10g01056 Bhi-Chr10:21255247 8.55E-13 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2162 PF00642 zf-CCCH 3.40E-08 CL0537 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01056 - - cpep:111777449 881.708