Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01147 CACCTGCAACATCATACTTGTGCTCCAACAAAAACCGTCGCCCACATACTCCACAATCCTCTCACTCAACTGTTTTTCTCGATCACAGTGCTCGCCGGAAACTGACATTGTCGGTGGAGCAAGCGCTGTCGTCGCCTACGCAGACGAAAATGCAGCTCCTCCTCCCCCGCCATAGTTTCCGGCTCATTAGAGCTTTGTTCTGTGCTACGGCTTTGCTTCAGTGGTTCACGGCGGCGGCTCAGCTCCAACACCGTGTACCGAATCTACATTGGCTTCCAGCCACTGCCACGTGGTACGGAAGTCCCGAGGGAGATGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCCAGAGTTGGGGCTGTGAGTCCAGTTCTGTTCAGAAACGGTGAAGGGTGTGGAGCCTGTTACAAAGTAAAATGTTTAGACCAGAACATTTGCTCCAGACGAGCTGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCGAATGGCAATACCCACTTCGATCTCAGCGGAGCCGCTTTTGGCCGTATGGCCATCGCCGGCGAAGGTGGGCAGCTGAGAAACCGAGGGGAAATCCCAGTAATTTACCGACGGACTCCGTGTAAGTACCCAGGCAAGAACATTGCGTTCCATGTCAATGAAGGCTCGACAGATTACTGGCTCTCACTGTTGGTTGAATTCGAGGATGGGGATGGAGACATAGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAGTGGCTGGATATGAACCATCTATGGGGGGCAAATTGGTGCATAATTGGTGGGCCATTAAAGGGCCCATTCTCGGTGAGATTAACAACATTATCTACAGGAAGAACCCTCTCAGCGAGGGATATAATCCCAAGGAATTGGTCTCCCAAAGCCACTTACACTTCCCGCCTTAATTTCTTCTCTTGATAAAGAAAGATAGAAGAGAAAAAAGAAGCAGTTAGCATTGACAAAAGAAGGGTATATTTGCTTCCTTTTTGTTTTATTATGCCTTAAAGGGGGAGCTTCCCTTCTCTGTAGCAGGAAAAGTAGCCGTTATCCGTTTTCTTTGAGTAGAAAAAGTGACCGTTGGAGTGCGAAATGGCATCCAATGAATGAGTAGAGACAGTAGTAGTGAGTGTGGTGTGGGGATATTGAATATTGATAGCCCTCTCCAAAGAGGAGAGAGAGCGTGGGTATTGTATTGTATTGTGTTATTAATTTCTCAACTTGTTGCTTTACTTTGTTTAATCAACTTTGGTCTCTTCACTCAAACTATGCTCATTTAAATAGGGCTATATACAGCTGGTTTTCAGCTC 1348 47.33 MQLLLPRHSFRLIRALFCATALLQWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNFFS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24063003 24064976 + XM_039045930.1 Bhi10g01147 47488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01147 269 SMART dpbb_1 77 159 IPR007112 -
Bhi10g01147 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 182 263 IPR007117 -
Bhi10g01147 269 Gene3D - 27 165 IPR036908 -
Bhi10g01147 269 SUPERFAMILY Barwin-like endoglucanases 39 168 IPR036908 -
Bhi10g01147 269 Pfam Lytic transglycolase 79 158 IPR009009 -
Bhi10g01147 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 169 IPR007112 -
Bhi10g01147 269 SUPERFAMILY PHL pollen allergen 169 263 IPR036749 -
Bhi10g01147 269 PRINTS Major pollen allergen Lol pI signature 79 90 IPR005795 GO:0005576|GO:0019953
Bhi10g01147 269 PRINTS Major pollen allergen Lol pI signature 119 134 IPR005795 GO:0005576|GO:0019953
Bhi10g01147 269 PRINTS Major pollen allergen Lol pI signature 141 156 IPR005795 GO:0005576|GO:0019953
Bhi10g01147 269 PRINTS Major pollen allergen Lol pI signature 173 188 IPR005795 GO:0005576|GO:0019953
Bhi10g01147 269 PRINTS Major pollen allergen Lol pI signature 189 204 IPR005795 GO:0005576|GO:0019953
Bhi10g01147 269 PRINTS Major pollen allergen Lol pI signature 239 256 IPR005795 GO:0005576|GO:0019953
Bhi10g01147 269 PANTHER EXPANSIN-LIKE PROTEIN B1 17 268 - -
Bhi10g01147 269 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Bhi10g01147 269 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Bhi10g01147 269 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Bhi10g01147 269 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576
Bhi10g01147 269 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576
Bhi10g01147 269 PRINTS Expansin/Lol pI family signature 249 263 IPR007118 GO:0005576
Bhi10g01147 269 Gene3D - 166 268 IPR036749 -
Bhi10g01147 269 Pfam Expansin C-terminal domain 171 252 IPR007117 -
Bhi10g01147 269 PANTHER EXPANSIN-B3 17 268 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01854 Bhi10g01147 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00582 Bhi-Chr1:10515389 Bhi10g01147 Bhi-Chr10:24063003 8.09E-76 dispersed
Bhi10g01147 Bhi-Chr10:24063003 Bhi11g00352 Bhi-Chr11:8260932 6.35E-38 dispersed
Bhi10g01147 Bhi-Chr10:24063003 Bhi05g01854 Bhi-Chr5:58157608 3.61E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01147 K20628 - csv:101202998 515.768