Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01180 AGATTCTCTCTTGAATTCTTCAAGGAAACGAGAGTGATTCAGGGCTTTCACAATGAGGTGGAATTCATTCTACACCAAAGCTTCTAAGGCTTTTCATGATCATCCTTCCATCTCCAAGCTTCTCATTGTTTTCACTGTCAGTGGAGGTGGATTGGTGGCAGCTACTAATGGCAGATCTCTGTATCATTCTACATATGCTGATGCAGTCCAACAAGATGGTGACTACAAGAAGAAGAAAGTGGTAGTGCTTGGAACAGGATGGGCTGGCACTAGTTTTTTGAAGAATCTCAAGAGCTCCTCTTATGATGTTCATGTTATTTCTCCTCATAATTACTTTGCTTTCACCCCTTTGCTTCCTAGTGTCACCTGTGGCACAGTTGAAGCACGCAGCATTGTCGAACCAATTCGTGCTATTACAAAGAAGAAAGGTCTGAATATTGAATTTAGGGAAGCTGAGTGCTATAAGATTGATGCAGAGAAGAAGGTGTTGTTCTGTCGATCAAGTCAAGACACAAATTTGGGTGGCAGAGAAGAATTTTCTGTTGATTATGACTATCTGATTATAGCTATGGGAGCTAAATCCAACACTTTCAACACACCTGGAGTTGAGGAAAATGCTCACTTCCTGAAGGGAGTGGAAGATGCTCAGAGGATTCGTCAGACCGTAATCGATTGTTTCGAGCGAGCCAGCCTTCCAAATATAAGTGAAGAAGAGAAGAAGAGAACTCTTCACTTTGTAATAGTTGGAGGTGGTCCAACTGGGGTGGAATTTGCAGCAGAGCTTCATGACTTTGCAGTTGAGGATTTAGCAGGGTTGTATCCTTCATTGAAAGACTACGTGAAAATAACCCTCCTAGAGGCAGGGGATCATATTTTGAACATGTTTGACAAGAGGATTACTGCCTTTGCTGAAGAAAAATTTCAAAGAGATGGGATTGAATTAAAAACTGGTTCCATGGTTGTAAAAGTAACCGATAGGGAAATCTCCACCAAAGAAAGAGCAACCGGTGAATTCGTGTCTATTCCTTATGGAATGGTCGTCTGGTCTACCGGCATCGCCCCTCGTCCTCAAGTTGTTGATTTCATGAAGCAGATTGGTCAGACTAACAGAAGAGCTTTGGCAACTGATGAGTGGCTAAGGGTTGAAGGATGTGATAGTGTCTATGCTCTTGGTGATTGTGCCACTGTAAATCAAAGAAGAGTCATGGAAGATATTGCAGTAATATTCAGCAAGGCAGACAAGGACAAGTCAGGAACTTTAGCCCTGCAAGAGTTCCATGAAGTGGTAGATGATATTTGTGAGAGGTACCCTCAAGTAGAAATCTATCTGAAGAAGAAGCAGTTGAAGAACTTTTCAGCTTTGTTGAAGAAGACGCAGTCCGACTCACAGAAACAGTCGGCCGAACTGGATATCGAAAGCTTTAAGTCCTTACTTTCGGAAGTTGATTCTCAGATGAAAAATCTCCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAATATCTTGCAAGCTGCTTCAACAGGATGGAGCAGTGCGGAAAGTACCCTGAAGGCCCTCTCCGATTTCGAGGGACAGGACGCCACAGGTTTCACCCCTTCAGGTATAAGCATTTTGGGCAGTTTGCTCCTCTTGGGGGAGAACAAACTGCAGCTCAACTTCCTGGAGATTGGATCTCAATTGGTCATAGCACCCAGTGGCTTTGGTACTCTGTTTATGCCAGCAAGCTAGTAAGTTGGCGCACAAGGATTCTGGTCATGTCAGATTGGGGTAGAAGATTCATATTTGGCAGGGATTCAAGCAGAATCTGATCTCTCCTTCAAAACAGTCAACTCTACAAATTGAACAACATTTGATCTTAT 1861 43.2 MRWNSFYTKASKAFHDHPSISKLLIVFTVSGGGLVAATNGRSLYHSTYADAVQQDGDYKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRAITKKKGLNIEFREAECYKIDAEKKVLFCRSSQDTNLGGREEFSVDYDYLIIAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQTVIDCFERASLPNISEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLAGLYPSLKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIELKTGSMVVKVTDREISTKERATGEFVSIPYGMVVWSTGIAPRPQVVDFMKQIGQTNRRALATDEWLRVEGCDSVYALGDCATVNQRRVMEDIAVIFSKADKDKSGTLALQEFHEVVDDICERYPQVEIYLKKKQLKNFSALLKKTQSDSQKQSAELDIESFKSLLSEVDSQMKNLPATAQVAAQQGEYLASCFNRMEQCGKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSVYASKLVSWRTRILVMSDWGRRFIFGRDSSRI 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25342209 25345063 + XM_039045002.1 Bhi10g01180 47521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01180 585 SUPERFAMILY FAD/NAD(P)-binding domain 60 279 IPR036188 -
Bhi10g01180 585 PANTHER - 4 585 - -
Bhi10g01180 585 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Bhi10g01180 585 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Bhi10g01180 585 Gene3D - 51 436 - -
Bhi10g01180 585 PANTHER NADH DEHYDROGENASE 4 585 IPR045024 GO:0003954|GO:0006116
Bhi10g01180 585 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 386 IPR023753 GO:0016491
Bhi10g01180 585 SUPERFAMILY EF-hand 340 463 IPR011992 -
Bhi10g01180 585 SUPERFAMILY FAD/NAD(P)-binding domain 221 380 IPR036188 -
Bhi10g01180 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 63 82 - -
Bhi10g01180 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Bhi10g01180 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 227 245 - -
Bhi10g01180 585 Gene3D - 461 575 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01823 Bhi10g01180 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00659 Bhi-Chr8:22750016 Bhi10g01180 Bhi-Chr10:25342209 7.20E-06 dispersed
Bhi08g01904 Bhi-Chr8:54761852 Bhi10g01180 Bhi-Chr10:25342209 0 dispersed
Bhi10g00822 Bhi-Chr10:16619375 Bhi10g01180 Bhi-Chr10:25342209 7.16E-15 dispersed
Bhi10g01180 Bhi-Chr10:25342209 Bhi05g01823 Bhi-Chr5:57605643 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01180 K03885 - csv:101209855 1120.92