Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01232 GGATTCGTTGGGATTGGGAAGAAAGAAAGTTGACCCAACAATTAATTAAGCAAATCGAATCCAGCTGATTTTTAAGAACGGTTTGTTTGATTGAATGGAACTGTAAGAAGAACAGCTCGTCTCTTTAATTACCAATTCATCGAAACACACAGCAAAAAGAAAACGTCAGTGTGTCAAAGTCCCAGAAAGAAATATACCAACACGAGAGAGAAAGAGGGAAAAAAGTGGTCTCCTGACTCATCTCTTTGTATTTCTTTTCTTGTAGAGCTTCAAAAGTTGCTTCCCCAACTAATATTCTTCTCTTTCTATCTTCAATTCCCCTCTATGTTTCACTTTCCCCTTTCCTCCACCTGAGTTTTCAAAAGGGTTGTCACAAAATTTTGTTATGGGGTGTTGTGAATCCACTTTTCTGACAGAAACCCATCCCGAAAAGCTTCAAACCCAGCAACCTGCACCTCCCTATGCTGCGGTGGAGCCGCTGCCACCGCCGCCGCCACCGCCTGCTGTTGGACATGACCCGACGCCGCCGCCCGGGGAAATGGTTTCCACTTTCTCCGAGTTTTCCTTCTCGGACCTTAAGGCTGCTACCGACAATTTCAACTCCAACTTCATAGTCTCAGAGAGCGGCGAGAAGGCTCCCAACATTGTGTATAAGGGTCGACTTCAAAACCGCAAGTGGATCGCTGTGAAGAAGTTTAAGAAGGTGGCTTGGCCGGACGCCAAGCAATTTGTGGAAGAGGCTTCGGGAGTTGGGAAGCTACGGCATCCAAGGTTTGCGAATTTGATAGGGTATTGCTGCGATGGTGATGAGAGGCTGCTTGTTGCGGAGTACATGCCTAATGATACTCTTGCAAAGCATTTATTCCACTGGGAAAATCAAACCATTGAGTGGGCCATGCGGTTGAGAGTTGCTTACTATATTGCTGAAGCCTTGGAATATTGTACCACTAAAGGCCGTGCGTTGTACCATGACTTGAATGCTTATAGAGTTCTTTTTGATGAGGGCGGCGATCCACGTCTTTCATGTTTTGGATTGATGAAAAACAGTCGGGATGGTAAGAGTTACAGCACAAATCTGGCCTACACACCACCTGAGTATTTGAAAAATGGAAGGGTAACCCCTGAAAGTGTTATTTATAGCTTTGGTACTGTCCTCTTGGATCTTCTAAGTGGCAAGCACATCCCTCCAAGTCATGCTCTTGATCTGATTCGAGGAAAGAATATCATTCTCTTAATGGATTCACATTTGGAAGGAAAATTTTCTACAGAGGATGCAACTGTGGTTGTTAATCTTGCTTCTCAATGTTTACAATATGAACCTAGGGACAGGCCTAACACAGAGGAACTCGTTTCAACTCTTGCTCCCTTGCAAACAAAACCAGATGTTCCCTCTTATGTCATGCTTGGAATGAAGAAGCAGGAGGATGCCCCAATACCCCCGGTAACCCCAGTAGTCCCAGTAGCACCAATAACTCCACAACGTCCTTTATCGTCAATGGGTGAGGCCTGTTCGAGGATGGATCTCACTGCAATTCATCAAATATTGGTTATGACGCACTACAGAGACGATGAAGGAACTAATGAGCTATCTTTTCAAGAGTGGACACAACAGATGAGAGATATGCTGGAGGCAAGAAAGCGTGGGGATTTTGCCTTTCGGGACAAAAATTTTAAAGCTGCAATTGACTGCTACTCACAGTTCATAGATGTAGGAACCATGATCTCCCCAACCGTGTTTGCTCGACGAAGCCTATGTTATTTGTTGTGTGATCAACCCGATGCTGCACTTCGGGATGCAATGCAAGCACAGTGCGTACACCCCGACTGGCCCACAGCCTTCTACATGCAATCGGTTGCACTTGCAAAGCTGGATATGCAGAAAGACGCCATTGACATGTTGAACGAAGCAGCTGCGTTAGAAGAGAAGAGGCAACGAGGTGGACGATGATCACTAAAATGAACTCAACATTGCTGTAATTACAAGCATACTGGTGTTGTTTGTTGCTGAGGCTACCACAATTTGTATAAAGTGTGAGCTGGTAATTTTCTTGGAAAAAGAAAATGTGAACTACTTACATTTAACTTGATTGTTCATGTCAGTTGAAGGGGGGCTTGTAAATTCAATCAATTTAAACCATCTCTATGGATATGACCTAGTTAGTTTGGTAGAGCCCCTTTGTCCAGAGTTTTTATTTGCAACATAGTAGTAGTGTAGATAAATCCCTGACCTTCTGATTTAAATCAAACAAAAGAATAATATTCAAACTTCCAAAAA 2275 43.74 MGCCESTFLTETHPEKLQTQQPAPPYAAVEPLPPPPPPPAVGHDPTPPPGEMVSTFSEFSFSDLKAATDNFNSNFIVSESGEKAPNIVYKGRLQNRKWIAVKKFKKVAWPDAKQFVEEASGVGKLRHPRFANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAYYIAEALEYCTTKGRALYHDLNAYRVLFDEGGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLKNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDLIRGKNIILLMDSHLEGKFSTEDATVVVNLASQCLQYEPRDRPNTEELVSTLAPLQTKPDVPSYVMLGMKKQEDAPIPPVTPVVPVAPITPQRPLSSMGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDKNFKAAIDCYSQFIDVGTMISPTVFARRSLCYLLCDQPDAALRDAMQAQCVHPDWPTAFYMQSVALAKLDMQKDAIDMLNEAAALEEKRQRGGR 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27605335 27610440 - XM_039045958.1 Bhi10g01232 47573

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01232 520 MobiDBLite consensus disorder prediction 1 52 - -
Bhi10g01232 520 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATED 1 520 - -
Bhi10g01232 520 Gene3D Tetratricopeptide repeat domain 411 518 IPR011990 GO:0005515
Bhi10g01232 520 SUPERFAMILY Protein kinase-like (PK-like) 47 334 IPR011009 -
Bhi10g01232 520 MobiDBLite consensus disorder prediction 26 46 - -
Bhi10g01232 520 Gene3D Phosphorylase Kinase; domain 1 50 149 - -
Bhi10g01232 520 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 520 IPR045845 GO:0004672|GO:0009742
Bhi10g01232 520 Pfam Protein tyrosine and serine/threonine kinase 88 325 IPR001245 GO:0004672|GO:0006468
Bhi10g01232 520 Gene3D Transferase(Phosphotransferase) domain 1 151 341 - -
Bhi10g01232 520 SUPERFAMILY TPR-like 416 513 IPR011990 GO:0005515
Bhi10g01232 520 Coils Coil 494 514 - -
Bhi10g01232 520 ProSiteProfiles Protein kinase domain profile. 74 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01232 K14500 BSK; BR-signaling kinase [EC:2.7.11.1] - csv:101205895 941.414
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01558 Bhi-Chr4:39365003 Bhi10g01232 Bhi-Chr10:27605335 0 dispersed
Bhi09g02923 Bhi-Chr9:76350851 Bhi10g01232 Bhi-Chr10:27605335 0 dispersed
Bhi10g01230 Bhi-Chr10:27605335 Bhi10g01232 Bhi-Chr10:27605335 0 dispersed
Bhi10g01232 Bhi-Chr10:27605335 Bhi12g00255 Bhi-Chr12:7780893 0 dispersed
Bhi10g01231 Bhi-Chr10:27605335 Bhi10g01232 Bhi-Chr10:27605335 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g243 . . . . Bpe07g00697 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1227 . Lsi10g00824 . . . . . . . . . . . . . . . . . . . . Bhi10g01232 . . . . . . . . . . . . . . . . Cme11g01222
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000526 3 6 2 3 3 3 6 3 3 3 3 3 6 3 3 6 3 5 6 3 3 3 3 3 2 3 3 6 5 2 109
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88294 PF07714 PK_Tyr_Ser-Thr 1.60E-27 CL0016 Bhi PK