Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01241 GGAAGCAGAGCTGAGCTTCCTAATATAAACAAACCCACAGAAACAGAGGAAAGTTGGAGGAGAGAGAGAGAGGGGGGAAATCGGAGACGATGGAACCGAAGAAAGTGGGGATAATTGGAGCTGGAATAAGCGGACTAGCGGCCTGCAAATTCACTTTATCCAAAGGATTGATTCCGATAGTATTCGAGGCCAAAGGCGACATTGGCGGCGTTTGGACGGAGACGCTGGAGACGACGGCGTTACAGACGCCGAGAGAGATGTTCCAATTCTCCGATTTCCCTTGGCCGAAATCGGTGACCGAAGAATTTCCGAGATATAATCAAGTTCTAGATTACCTCAGATCTTACGCGGAACATTTCGGATTGTTGAAGCACATCAGATTCAATTCTAGAGTTCTTAGTATCGACTACGAAGGCTGCTCCGATGAGGAGATGGAAGGCTGGACTCTCTGGGGAGGCTCCGGCAAAGCCTTCGCTGAAGGGCGTAAATGGAGGCTCAATGTTGTTGATGAAACTAATGGTGCACTCCAGGCAATCGTGGTGGACTTCGTAGTACTCTGCATCGGAAGATTCTGCGACGTTCCAAATATCCCCAAATTCCCTTCCAATGAAGGCCCCGAAGCTTTCAAAGCCGGTAAAGTTCTTCACTCTCTCGAATATTCCGCCATGGATTTCCACACTGCTTCCAATCACATCAAAGACAAACGAGTCACCGTCGTCGGTTTCCAGAAATCTGCTCTCGACATCGCCATGGAATGCGCCAATGCCAATGGCCCTAACAAACCCTGTACTGTGCTCTACAAAACCGAGCATTGGAACCTTCCTAATGACCATCCATGGGGGATCCCTCTGTCTTTTCTCTACATGAACCGATTCGCCGAGCTTCTGATTCACAAACCTGGCGAGGGTTTCTTCCTTTATCTCCTTGCCGTTCTTCTTTCCCCAATTAGATGGTTGTTCTCAAAGATTGTAGAAACCTACGTGATTAAAAAGCATAGATTAGCTAAATACGGGATGGTGCCAAGCCATAGCTTTCTACAGAGCATCAGTGCTTGTTTTATTGCTACATTACCTGAGAAATTCTATGACAAAGTGGATGAAGGAAGCATTGTTCTGAAGAAATCGCAGAGTTTCGGGTTTTGTGAAGAGGGTATCATGATCGAAGGAGAAACCAAACCAATTCACTCTGATTTGGTCATTTTGGCTACTGGATACAGAGGCGATCAAAAGCTTAAACAAATATTTGCTTCCTCTACTTTTCGAGATTACATGACTTTTCACGATTCCATGATTTCCTTGTACAGAGAACTCTTCAAACTTGTTCACCTCGGAGATCCGGTGTCGATGGTTGGCGGAGTTTATGGATGACACGTTCAAGCTACCGAGCATCAAGGACATGGAGAAAGACATAGTCAACTGGGAGAAGACCTTGAAGCAATACTCAGGGCCTTTCTTTAAGCGAGCTTGCATTGCCATTTTGCATATTTGGTATTGCGATCAGT 1501 46.04 MEPKKVGIIGAGISGLAACKFTLSKGLIPIVFEAKGDIGGVWTETLETTALQTPREMFQFSDFPWPKSVTEEFPRYNQVLDYLRSYAEHFGLLKHIRFNSRVLSIDYEGCSDEEMEGWTLWGGSGKAFAEGRKWRLNVVDETNGALQAIVVDFVVLCIGRFCDVPNIPKFPSNEGPEAFKAGKVLHSLEYSAMDFHTASNHIKDKRVTVVGFQKSALDIAMECANANGPNKPCTVLYKTEHWNLPNDHPWGIPLSFLYMNRFAELLIHKPGEGFFLYLLAVLLSPIRWLFSKIVETYVIKKHRLAKYGMVPSHSFLQSISACFIATLPEKFYDKVDEGSIVLKKSQSFGFCEEGIMIEGETKPIHSDLVILATGYRGDQKLKQIFASSTFRDYMTFHDSMISLYRELFKLVHLGDPVSMVGGVYG 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28472387 28481569 + XM_039044517.1 Bhi10g01241 47582

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01241 425 Gene3D - 2 260 IPR036188 -
Bhi10g01241 425 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 4 407 - -
Bhi10g01241 425 SUPERFAMILY FAD/NAD(P)-binding domain 1 278 IPR036188 -
Bhi10g01241 425 PIRSF FMO 2 423 IPR000960 GO:0050660|GO:0050661
Bhi10g01241 425 Pfam Flavin-binding monooxygenase-like 4 409 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bhi10g01241 425 PANTHER DIMETHYLANILINE MONOOXYGENASE 4 407 - -
Bhi10g01241 425 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01241 K00485 FMO; dimethylaniline monooxygenase (N-oxide forming) / hypotaurine monooxygenase [EC:1.14.13.8 1.8.1.-] - csv:101206134 751.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01241 Bhi-Chr10:28472387 Bhi10g01250 Bhi-Chr10:29055280 0 dispersed
Bhi10g01240 Bhi-Chr10:28472387 Bhi10g01241 Bhi-Chr10:28472387 0 tandem
Bhi10g01241 Bhi-Chr10:28472387 Bhi10g01242 Bhi-Chr10:28472388 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g233 . . . . . . . . . . Cma02g00291 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed01g0637 Cmo02g00285 . . . . . . . Bhi10g01241 Tan05g1063 Cmetu02g1944 . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000621 2 8 2 2 1 4 2 5 5 4 3 5 4 3 4 4 4 1 1 3 4 3 2 4 4 3 1 4 3 7 102