Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01242 GAAGCAGAGCTGAGCTTCCTAATATAAACAAACCCACAGAAACAGAGGAAAGTTGGAGGAGAGAGAGAGAGGGGGGAAATCGGAGACGATGGAACCGAAGAAAGTGGGGATAATTGGAGCTGGAATAAGCGGACTAGCGGCCTGCAAATTCACTTTATCCAAAGGATTGATTCCGATAGTATTCGAGGCCAAAGGCGACATTGGCGGCGTTTGGACGGAGACGCTGGAGACGACGGCGTTACAGACGCCGAGAGAGATGTTCCAATTCTCCGATTTCCCTTGGCCGAAATCGGTGACCGAAGAATTTCCGAGATATAATCAAGTTCTAGATTACCTCAGATCTTACGCGGAACATTTCGGATTGTTGAAGCACATCAGATTCAATTCTAGAGTTCTTAGTATCGACTACGAAGGCTGCTCCGATGAGGAGATGGAAGGCTGGACTCTCTGGGGAGGCTCCGGCAAAGCCTTCGCTGAAGGGCGTAAATGGAGGCTCAATGTTGTTGATGAAACTAATGGTGCACTCCAGGCAATCGTGGTGGACTTCGTAGTACTCTGCATCGGAAGATTCTGCGACGTTCCAAATATCCCCAAATTCCCTTCCAATGAAGGCCCCGAAGCTTTCAAAGCCGGTAAAGTTCTTCACTCTCTCGAATATTCCGCCATGGATTTCCACACTGCTTCCAATCACATCAAAGACAAACGAGTCACCGTCGTCGGTTTCCAGAAATCTGCTCTCGACATCGCCATGGAATGCGCCAATGCCAATGGCCCTAACAAACCCTGTACTGTGCTCTACAAAACCGAGCATTGGAACCTTCCTAATGACCATCCATGGGGGATCCCTCTGTCTTTTCTCTACATGAACCGATTCGCCGAGCTTCTGATTCACAAACCTGGCGAGGGTTTCTTCCTTTATCTCCTTGCCGTTCTTCTTTCCCCAATTAGATGGTTGTTCTCAAAGATTGTAGAAACCTACGTGATTAAAAAGCATAGATTAGCTAAATACGGGATGGTGCCAAGCCATAGCTTTCTACAGAGCATCAGTGCTTGTTTTATTGCTACATTACCTGAGAAATTCTATGACAAAGTGGATGAAGGAAGCATTGTTCTGAAGAAATCGCAGAGTTTCGGGTTTTGTGAAGAGGGTATCATGATCGAAGGAGAAACCAAACCAATTCACTCTGATTTGGTCATTTTGGCTACTGGATACAGAGGCGATCAAAAGCTTAAACAAATATTTGCTTCCTCTACTTTTCGAGATTACATGACTTTTCACGATTCCATGATTTCCTTGTACAGGCTATGCATTCATCCCAGAATCCCACAGCTAGCTGTGGTTGGATTTACAGAGAACTCTTCAAACTTGTTCACCTCGGAGATCCGGTGTCGATGGTTGGCGGAGTTTATGGATGACACGTTCAAGCTACCGAGCATCAAGGACATGGAGAAAGACATAGTCAACTGGGAGAAGACCTTGAAGCAATACTCAGGGCCTTTCTTTAAGCGAGCTTGCATTGCCATTTTGCATATTTGGTATTGCGATCAGTTGTGTAAGGACATGGGATGGAACCCCAGGAGGAAAAAAGGCTTCTTTGCTGACTTGTTTCTTCCTTATGGCCCTTCAGACTATGCTTCCCCTTGAAGATTAGGAAAGTATATACTTTCTCATTTCTCTATCATATCTAATAAAAGTTGCAGTGCTATTTCCATTGCCCTAATAAAACCAATATTATTTCAAA 1742 45.06 MEPKKVGIIGAGISGLAACKFTLSKGLIPIVFEAKGDIGGVWTETLETTALQTPREMFQFSDFPWPKSVTEEFPRYNQVLDYLRSYAEHFGLLKHIRFNSRVLSIDYEGCSDEEMEGWTLWGGSGKAFAEGRKWRLNVVDETNGALQAIVVDFVVLCIGRFCDVPNIPKFPSNEGPEAFKAGKVLHSLEYSAMDFHTASNHIKDKRVTVVGFQKSALDIAMECANANGPNKPCTVLYKTEHWNLPNDHPWGIPLSFLYMNRFAELLIHKPGEGFFLYLLAVLLSPIRWLFSKIVETYVIKKHRLAKYGMVPSHSFLQSISACFIATLPEKFYDKVDEGSIVLKKSQSFGFCEEGIMIEGETKPIHSDLVILATGYRGDQKLKQIFASSTFRDYMTFHDSMISLYRLCIHPRIPQLAVVGFTENSSNLFTSEIRCRWLAEFMDDTFKLPSIKDMEKDIVNWEKTLKQYSGPFFKRACIAILHIWYCDQLCKDMGWNPRRKKGFFADLFLPYGPSDYASP 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28472388 28481761 + XM_039044515.1 Bhi10g01242 47583

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01242 518 Gene3D - 2 259 IPR036188 -
Bhi10g01242 518 PANTHER DIMETHYLANILINE MONOOXYGENASE 4 517 - -
Bhi10g01242 518 PIRSF FMO 2 512 IPR000960 GO:0050660|GO:0050661
Bhi10g01242 518 Gene3D - 353 504 IPR036188 -
Bhi10g01242 518 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 4 517 - -
Bhi10g01242 518 SUPERFAMILY FAD/NAD(P)-binding domain 1 277 IPR036188 -
Bhi10g01242 518 SUPERFAMILY FAD/NAD(P)-binding domain 358 515 IPR036188 -
Bhi10g01242 518 Pfam Flavin-binding monooxygenase-like 4 499 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bhi10g01242 518 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01242 K00485 FMO; dimethylaniline monooxygenase (N-oxide forming) / hypotaurine monooxygenase [EC:1.14.13.8 1.8.1.-] - csv:101206134 969.533
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01538 Bhi-Chr4:38658905 Bhi10g01242 Bhi-Chr10:28472388 2.01E-132 dispersed
Bhi10g01237 Bhi-Chr10:27921359 Bhi10g01242 Bhi-Chr10:28472388 0 dispersed
Bhi10g01240 Bhi-Chr10:28472387 Bhi10g01242 Bhi-Chr10:28472388 0 dispersed
Bhi10g01242 Bhi-Chr10:28472388 Bhi10g01250 Bhi-Chr10:29055280 0 dispersed
Bhi10g01241 Bhi-Chr10:28472387 Bhi10g01242 Bhi-Chr10:28472388 0 tandem
Bhi10g01242 Bhi-Chr10:28472388 Bhi10g01243 Bhi-Chr10:28743218 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g232 . . . . . . . . . . Cma02g00290 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo02g00284 . . . . . . . Bhi10g01242 . . . Hepe08g0335 . . . . . . . . . . . . Cme11g01060
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000621 2 8 2 2 1 4 2 5 5 4 3 5 4 3 4 4 4 1 1 3 4 3 2 4 4 3 1 4 3 7 102