Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01290 ATGGGTTTCATGTGTGATTTTTGTGGGGATCAAAGATCAATGGTTTACTGCCGATCTGATGCTGCTTGTTTGTGCTTATCATGTGATCGTAATGTCCATTCGGCTAACGCCTTGTCGAGGCGACATACAAGAACGCTGTTGTGCGAAAGATGCCATTTGCAGCCCTCCATGGTAAGGTGTATTGATGAGAGGGTTTCTCTGTGTCAAAATTGTGACTGGACAGGTCATGGCACATCTACCCTTGCTTCATCATCACACAAGAGGCAAACCATCAATTGTTACTCTGGTTGTCCATCAGCTGCAGAACTTTCTTCCATCTGGTCCTTTGTTTTGGATGTTCCCTCTGTAAATGATGCTTGTGAGAAAGAGTTGGGATTGATGAGCATTGCTGAGAATAGCTTGGGGGGTGCCTGGAGCCTTTCGGAGAACATCGCCGGTCAAAGAATGCCTGGATCAACTGAAGCCAGTGATGTTTGCAGCAGGGAAAAGTCAAATGTTATGGTCGGATCATCTTCACTCATTGATTTTGGTTCTAGGCCTTACACTTCAGATCAGCCAGTTGAATTGGCTAATGTGGCTTTACCCAAGTTTTGCTGTCCTGGAACAAAAGTTGCGGAATTCTGTGGTGAGGATGATGATCTCTACAAGGAGTTTGATATGGATGAAATGGATTTAAATCTTGAAAATTATGAGGAGCTATTTAGTATGAGCATTAATCATTCTGAAGAATTTTTCGAGAACAGTGGAATTGATAGCTTTTTTGAGGCAAAAGGCCTATCTTTTGAAGATTCAGTTTGCCACAGTGCAGTTGCTGCAGAGGGTTCTTCCATCGGAGTTGTCAAATCAATGCAGCCAGCCTGCAGCAATGGTGCCTCTGCTGACTCAGTGATGAGTACTAAAACCGAACCGATTCTCTGTTTTAATTCAAGGCAAGCCCAATCAGGTGTGTCATTTTCTGGCCTTACTGGTGAGAGTAGTGCTGGTGACCATCAAGACTGTGGAGCCTCTTCAATGCTTCTAATGGGTGAGCCTCCATGGTGTACCCCTGGCCCTGAAAGTTCCTTCCCATCTACTGATCGTAACAGCGCCGTCCTGCGTTATAAGGAGAAAAAGAAGACACGCAAGTTTGAGAAAACAGTGAGATATGCCACTCGCAAAGCGAGAGCCGATGTCAGAAGGCGTGTGAAGGGACGGTTTGTGAAGGCTGGAGAGGCCTATGATTACGACCCACTGAACCAGGCTAGAAGCTGCTGAGAAGGTTCAATGTCGCCCAAAGACGAAAGGTGGATTTGAAAAAGCGAGTACAGAAGGTTCAACGACTAAACTTTCCGGGGCAGATCGAAAAGGGTGTATCGACTAGAGCTTCAGTTTATGATCCCATCCAATAATACAGACAGCAGAAGATTTGCTCCAAGATTTAACTGGTAGTTGCCGTAAAGGCCAGCTCCTCTACAAATATCTGTTTACTGATACTTGTTGGTCAGAAACTACACTTACTTGACTATTTCTTTCTTTCTTTCTTTCTTTTTTGTTGATCTGAAACCTGGCTTGTTGGGTGACAAGACCCACCATTGCCAAAATATTATTTTGTCTGTATAGCACAAAGTCAGCATATTTTACAACACATTAAGATGAGTTGAGTTTAGTAGTAGTAGATTATGGTTACAAGGTTGAACATAAGATTTTCTCCTCTTTCCCAGTTGTAAATGTAAGGTAATAAATTGCATGTGCAGTTGAGAGAGATTTGGTAATTATACTCATACCTTGTAAATTCATTTTCTTTACTTTAATTCTTCTTCTTTTAAA 1806 42.69 MGFMCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHTRTLLCERCHLQPSMVRCIDERVSLCQNCDWTGHGTSTLASSSHKRQTINCYSGCPSAAELSSIWSFVLDVPSVNDACEKELGLMSIAENSLGGAWSLSENIAGQRMPGSTEASDVCSREKSNVMVGSSSLIDFGSRPYTSDQPVELANVALPKFCCPGTKVAEFCGEDDDLYKEFDMDEMDLNLENYEELFSMSINHSEEFFENSGIDSFFEAKGLSFEDSVCHSAVAAEGSSIGVVKSMQPACSNGASADSVMSTKTEPILCFNSRQAQSGVSFSGLTGESSAGDHQDCGASSMLLMGEPPWCTPGPESSFPSTDRNSAVLRYKEKKKTRKFEKTVRYATRKARADVRRRVKGRFVKAGEAYDYDPLNQARSC 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30473835 30477391 + XM_039045925.1 Bhi10g01290 47631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01290 417 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 416 - -
Bhi10g01290 417 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bhi10g01290 417 CDD Bbox1_BBX-like 47 91 - -
Bhi10g01290 417 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 416 - -
Bhi10g01290 417 CDD Bbox1_BBX-like 5 47 - -
Bhi10g01290 417 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bhi10g01290 417 Pfam CCT motif 360 402 IPR010402 GO:0005515
Bhi10g01290 417 ProSiteProfiles CCT domain profile. 360 402 IPR010402 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01288 Bhi-Chr10:30472702 Bhi10g01290 Bhi-Chr10:30473835 0 dispersed
Bhi10g01290 Bhi-Chr10:30473835 Bhi10g01472 Bhi-Chr10:35166667 1.78E-70 dispersed
Bhi10g01289 Bhi-Chr10:30473835 Bhi10g01290 Bhi-Chr10:30473835 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2179 PF06203 CCT 6.50E-16 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01290 - - csv:101216401 778.859