Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi10g01293 | AGAACTTTACAGGAAGAAGGAGGCTGCCGTGTATAAAACCATCAAGAAAGACCCTCTTCTTTGTCATTAACAAAACATACAAAAAGGGAAATGAACTTCTCACCGATTCTGTGAATCTCAATCGTCTCTTGCTTCTTCTTGTTGATAATCTCTCTTCTTCTCATCCTTTGAAGGCAACTCTCTCTGATTTTGATCAGATATCAACAAAAGGATCAAACTGCAGAACCGTTTAAACTCAGAAAATGGGTCTCTCCAGCCTTCCTGCTCCTTCTGAAGGAGTACTAGGTGTGATCCTTGTAAATACAGCCTTATCGATTTCTATCTTCAAAGGCATAGTTCGATCGATCCTCCACGTCATTGGCTTCCATCTCTCGTCGTCGCCTACATTACCATCGTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTTCATCTTAACCCTAATGGAAGTTACATCGAAGAGTTCCGTAGCCGAATCCCAGCAATTCTGTTTGACAAAGTTCGTAGCTGCAAATGGCTTGAACACGACTGCTCGGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTGTCTTGTGGCCATCTTTTCCATAGAGTGTGTTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGTCCGCTGTGTCGAACTCCATTAATGTCTGAAGAAGACACAGGTTCCTGCTTTTGGTGAGCATTATGAATAATGATGGTTGAGGAATTTCATTCCGTGTACAGCAGCATAGTGTAGATAATCTTAAAAGTGCATCCGCAGGCCATAGCATTTGTACCTTTCATATGCATGAGGAGTTGAAGCGTGATGAGTGTGAATGGGTCTCAGGCCCAAGTTATTTCATTGTAAATATGAAGCTTTTTCTGGTTTTTTTTTTCTTTTTTGTGTTTATGCAGTCTTGAGAAGACTGGCTTTTACATTTCGAGTTAATGCAGCTACTTCCCTTTATCTA | 981 | 41.28 | MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVIGFHLSSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMSEEDTGSCFW | 155 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 30600945 | 30602848 | + | XM_039045044.1 | Bhi10g01293 | 47634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi10g01293 | 155 | SUPERFAMILY | RING/U-box | 88 | 146 | - | - | |
| Bhi10g01293 | 155 | Pfam | Ring finger domain | 98 | 141 | IPR001841 | - | |
| Bhi10g01293 | 155 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED | 1 | 155 | - | - | |
| Bhi10g01293 | 155 | SMART | ring_2 | 99 | 140 | IPR001841 | - | |
| Bhi10g01293 | 155 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 146 | IPR013083 | - | |
| Bhi10g01293 | 155 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
| Bhi10g01293 | 155 | PANTHER | - | 1 | 155 | IPR044249 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi07g01794 | Bhi-Chr7:49059528 | Bhi10g01293 | Bhi-Chr10:30600945 | 6.12E-18 | dispersed | |
| Bhi10g01293 | Bhi-Chr10:30600945 | Bhi12g00290 | Bhi-Chr12:8446762 | 1.40E-14 | dispersed | |
| Bhi12g02015 | Bhi-Chr12:63051557 | Bhi10g01293 | Bhi-Chr10:30600945 | 1.49E-06 | dispersed | |
| Bhi10g01292 | Bhi-Chr10:30600945 | Bhi10g01293 | Bhi-Chr10:30600945 | 1.41E-112 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi10g01293 | K16285 | - | csv:101216645 | 318.931 |