Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01300 TTTATTTTCAAAAACTATCCCAAAACTCCTTAACCCCCAATATTTTATCCTATTTTTGGCAATTTCCCCTTCTTCCTTCTCTCTCGATCAATCATACAACCGGCTTTATCTTCATCAACAACATCATCTTCTTCTTCTCAAACCTCACTCATGGCGGAGGAGGAAGTGGTTGAGATTGTGAAATTACTGTGAAAGAGAGAGGAGAGGAGGAGTATTGAAAATGGCGGATTCAGATAACGAATCAGGAGGTCACAACAGCAACGCAAACAGCGAGCTATCGGCAAAGGAGCAAGACAGATTCTTACCGATAGCGAACGTGAGTAGGATAATGAAGAAGGCGTTACCAGCAAACGCAAAGATCTCAAAAGATGCAAAAGAAACTGTACAAGAGTGTGTATCGGAGTTCATAAGCTTCATAACAGGAGAAGCATCAGACAAGTGCCAGAGAGAGAAGAGAAAGACGATCAACGGCGACGATTTGTTGTGGGCCATGACTACGCTTGGATTCGAAGAGTATGTGGAACCGCTCAAGAGTTATCTGCAGAAATACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGGCCCGGCGGCAGTGGAGCTAATGGTGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGTCAACTCTGGTACTACTGGTGGAATGTATGGTGGGATGATGATGATGGGGCATCATCATCATCAGGGAGGTGTTTATGGTGGTGGTGGATTTCACCATATGGGAATTGGCGGCGGGAAGGGAGGAAGTGGTGGTTCCGGCACTGGTCACCGGTAAAAGCGGCGGTTGTGGTGGTGTTGTGGGACTGCTGCAAGGTCAAGCTAAGTGGCTGCTAGTTGGAACCTTTTAAAGGTTCTCCAACTTTTGAGCATCATTGATGACTTTATAGGAAGTTAATAAGAATTTTTCCCCCCCTCCTTTTGGGTCTCTGAGTCCTTGAAAGTTGTGGAAAACTATGGATCTTATCAATTTTATCTATTTTTCCTTTTCTTTTTTGGTATAAGTGTAATTTCTGTAATTTGTGTGTAAGAAAGAGGGATATACGATAATATGATGCATTTGTACAAGAGTAACCCCAAATTTTACACCACTACTAATTACCAAGACCCTTTATCCTA 1170 44.36 MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTMGRQGEKDGGGGGPGGSGANGGGGGGGGGGGGVNSGTTGGMYGGMMMMGHHHHQGGVYGGGGFHHMGIGGGKGGSGGSGTGHR 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30789337 30791404 - XM_039045844.1 Bhi10g01300 47641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01300 202 MobiDBLite consensus disorder prediction 1 24 - -
Bhi10g01300 202 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 178 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bhi10g01300 202 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3 1 178 - -
Bhi10g01300 202 MobiDBLite consensus disorder prediction 1 21 - -
Bhi10g01300 202 MobiDBLite consensus disorder prediction 114 151 - -
Bhi10g01300 202 Gene3D Histone, subunit A 15 131 IPR009072 GO:0046982
Bhi10g01300 202 SUPERFAMILY Histone-fold 24 126 IPR009072 GO:0046982
Bhi10g01300 202 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bhi10g01300 202 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Bhi10g01300 202 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Bhi10g01300 202 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bhi10g01300 202 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02444 Bhi-Chr1:60200847 Bhi10g01300 Bhi-Chr10:30789337 1.14E-62 dispersed
Bhi10g00014 Bhi-Chr10:843581 Bhi10g01300 Bhi-Chr10:30789337 4.47E-09 dispersed
Bhi10g00015 Bhi-Chr10:843581 Bhi10g01300 Bhi-Chr10:30789337 4.47E-09 dispersed
Bhi10g01300 Bhi-Chr10:30789337 Bhi11g00447 Bhi-Chr11:10813050 8.42E-63 dispersed
Bhi10g01300 Bhi-Chr10:30789337 Bhi10g01301 Bhi-Chr10:30789337 1.10E-144 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2180 PF00808 CBFD_NFYB_HMF 1.90E-27 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01300 K08065 - csv:101219076 237.654