Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01318 AAAAAGCAAGCCAAAATCCCACGACCCAATTGTAGAAATTTTGCCAAAGTCGAGGGGATTCTGTTCTGTTCTTAAAAGTTAAAATGAATTAATCTCTGTTGTTAAGAGGGTTGATTTTGTTTTGATCATAGCTTTCTTTTGTTTGCTTTTGCTTAACGTTCTTCACTGGATGATGAGATAATGATGTACCCACTTTGAGATAGAGAACAAGAGAAGAGAGAGAGGGGATACTTTTTTTTCTTCTTTATTTTTGGTTTGGGTTTTTTTCCCTTTTCTTTTTTTCCACTATCTGATCATTGATTCCAGTTGTTATAATTATGGAGGAACCAACTGGGTTTAACCCTCTTTGAAAAAAAAATTCCCCTTCTCGCTTCCCCTTCCCCACCATCTTATCATTGATTCCAGTTAAATTCTTGCATCACCCAACTGGGTTTTACCTCCATTCACGAGAAGTAGAGGCAAAAGGGGAGAAAAGGGTCGATACTTCTTCAAAATAACGACTGGGTTTTATCCAGTCTGTTGCCAATATGATTCGTACGAAGCTTTTAGTCGATTAACGCCAATGATTTCTATGGATTCAAGTTCTGCACAGAACCAGACTAGGGAGCTTTGGATTGGAGGACAGAACGGGGGTTCTTTTGGGTCGTTGATTAATAATTAGTCCCTGTTTCGAGTTTTTTCAAGGGGATTCTTACTTAGTGTTGAGTTTGATGAGAAGGGTCAGTGAAGAATCGGTGGTATTTCTTTAATTTGTGGCTTTTTATAGTTAAATTTTGTTTTGTTGTTTTCCGGTGGAGGATTTTTATGTGGAGGGGTTGCTCTGGCGGAGCTGGGGTTTTTCTCAAGCTCTCAAGGTGCTTACTGAGGATGTCTTTGAGCTGCAAGTTTTCTACCGCTAACGGGAAATTTCCAGCTGGGTTTAAGCTGAAGAAGGCTAAGGAACATCTATGTTCGTTAAATTCCACCGGGAAATGGAAGAAGAAGCTTCTCTGTTTTTGGATTTTTGCTGTAGTTATAGTTTTAAGCAGTTGGTTTTCCTTGCGTTCGTATAATGTGAACAGTGGAACAAAACAGAAGACCTCGAACTTGTTCAACGAAGAAACTCGAACTTTGCTGCGGCATTTCAATATGTCATCCATTGGGTGCACCAATGATTTTGGATCTGACACATCACAGTTGAATGGAATTGCCTGTGCCCTAAGGTTACTGTACTGGGAGCAAGATTTTCACAAGCAGTTTGTATGGGTTGAAGAAAGTGAAGATTCCAATGTTGGGGAGTGTCCAATTCCAACTGAGAAGATCCCTGGAAATTCTGGCCAATTATTCTCTGATGACATAACTGTTCCATTTGCTACAGACTTATCTGCCTCTTTACTCTCTACTGGAAATCAGCTTTGTGAAAAGATAATTGAACAAGCAGGAGTGGGAAGATGCCTTTTAAGAAAGCACTGGAAGAATTTTTGTAGTTCGTTGATTGGATGTTTTTGGGTTCTCCTTGGAGTGATAGCATTCCAGAAAATATCTGGTTTTCATCTAAAATTGTGGAATAAGAAACATCCAAAGCCAAACCAGCCATTGGTTCATCAACAGAGGGTCTTACTAGGGAGAAAGCAACATCAACAAGCCAAAGAGTCTCCTAAAGGAGCTGGGAAATGGCGGAAGGTGCTCCTAAGAATATTTATTGTAGTTGGAATCGTTGGGTCCATTTGGTTATTTTGGTACCTGAACCAGACAGCTATTTTGAGAAGAGAAGAAACACTTGCAAACATGTGTGATGAGCGAGCCCGGATGTTGCAGGACCAATTCAATGTTAGCATGAACCATGTTCATGCATTAGCCGTTCTTACCTCTACCTTCCACCATGGGAAACAGCCTTCTGCCATTGATCAGAGAACATTTAGTGAGTATACAGAAAGAACAGCCTTTGAAAGACCACTGACTAGTGGTGTAGCTTATGCTTTGAAAGTTAATCACTCAGAAAGGGAGCATTTTGAGATGATGCATGGATGGACGATAAAGAAAATGGAGACAGAGGACCAAACTCTTGTTCAAGATTGTAATCCAGAAAATTTGGAACCTGCACCAATTCGAGATGAATATGCACCTGTCATATTTTCTCAAGAAACGGTAGCTCATATAGTTTCTATCGACATGATGTCTGGAAAAGAAGATCGCGAGAACATCTTGCGAGCTAGGGCTTCTGGAAAGGGTGTGCTTACATCTCCTTTTAAACTCTTGAAATCTAATCACCTTGGAGTTGTCCTCACATTTGCTGTCTATAACACTGACCTCCCTCCAGATGCTACTCCTGAGCAACGTATTGAAGCTACTGTTGGTTATCTAGGTGCCTCATATGATATCCCCTCACTGGTGGAGAAGCTTTTGCATCAGCTTGCTAGCAAGCAGACAATTGTTGTGAATGTTTATGATACAACCAATGATTCTGCTCCCATCAACATGTATGGCTCTGATTTTACCGATACCGGGCTACTGCATATTAGTAAACTTGATTTTGGGGATCCTTTAAGAAGGCATGAGATGCATTGTAGATTCAAGCATAAACCTCCACCTCCTTGGACAGCTATCAATTCATCAGTAGGTGTCCTAATCATTACCTTGCTGGTTGGCCATATTTTTCGTGCAGCTATAAGTCGGATTGCAAAAGTGGAGAATGACTATCACAAGATGATGAAGCTTAAAAGTCGTGCTGAAGCTGCTGATGTGGCCAAATCACAGTTTCTGGCAACAGTTTCCCATGAGATCAGAACACCAATGAATGGTGTTTTAGGCATGCTGAAATTACTGATGGACACTAACCTTGATTCAAATCAACTGGATTTTGCCCGGACTGCTCACGAGAGTGGAAAAGATCTGATATCACTCATAAATAAGGTTCTCGATCAAGCTAAGATAGAATCAGGAAGGCTTGAACTTGAATCTGTACCTTTCGATCTGCGTGCTATAGTTGATAATGTGCTCTCACCTTTTGCACTCAAATCCAATGACAAGGGAATTGAGTTGGCTGTTTATGTCTCTGATTTGGTGCCTGAAGTTGTCATTGGTGACCCTGGACGCTTTCGTCAAATAATTACTCATCTTGTTGGAAATTCACTCAAGTTTACTCATAATAAGGGGCACATACTAGTCTCAGTGCATCTGGCTGATGAAGTGAGAGGCCCAGTTGATTTTATGGACATTGTGCTTAAACAAGGCTCATATGTAGTTGGAGACACATCAAACAATAGCTGTACTACATTTAGTGGGTTACCTGTGGTGGATAGATGGAAAAGCTGGGAAAATTTCAGAAAGTTCAGCAGGACGGATGCGGTGGAGGAACCCAAAACAATTAGAATTCTCGTGACTGTTGAGGATACAGGTGTAGGAATTCCCCAAGATGCACAAAGCCGAATATTCACTCCTTTTATGCAGGCTGATAGTTCCACTTCTCGGACGTATGGTGGCACTGGAATAGGATTGAGCATTAGCAAACGTTTGGTGGATCTCATGGAAGGGGAGATTGGGTTTGTGAGTGAGCCTGGTATAGGCAGCACATTTTCATTTACGGTTTCTTTCCAGAAAGGGGAAATAAGTTTTTTGGATACAAGGCGGCCACAGTATGCTGTGGGTATTGGAGAGTTCCAGGGGCTAAGAGCATTAATAATCGATAATAGCTGCATTCGAGCAGAGGTCACGAGATATCATCTGCAGAGACTGGGGATTTCTGTTGATATAACTCTGAGTGCAGAATCTGCTTATCAATATCTATCCAATACCTCGAATGCAAGAGCATCAACACAATTGGCCATGATTCTTATAGACAGAGACATCTGGGACAAGAAAGTTGGTCTCAAGTTCCATCTTTTGTTTAAAGAGCATGTGGATAAAAGTGTGACAAATGTCCAGATGAATGGTCCAAAGCTCTTTCTCCTGGCAAACCCCAAAAGCTCCAATGAGCAATATGAACTTAAATCTTCTGGTCATGTAAATAATATCTTAAGTAAACCTCTTCAGTTAGACGTGTTGGTGAGTTGCTTCCACGAAGCCTTTAGGATTGAGAAGAGGAATCAAGTAATTATTAAAAAACCATCTACTCTTGGAAAGCTACTGAAAGAAAAGCATATTTTGGTTGTGGATGACAATGCTGTTAACAGAAGGGTGGCAGAAGGTGCACTAAAGAAATATGGAGCCGTTGTAACTTGTGTAAAATGTGGAAAGGATGCTGTAGCTCTCCTCAACCCTCCACACAACTTTGATGCTTGCTTCATGGACCTCCAGATGCCTGAGATGGACGGGTATGAAGCTACAAGACAGGTCCGTGCTGTAGAAAGTGAGGTGAACGCGAAAATTGCATCTGGAGAAGTGTCGACTGAGGACAATAAAGTCCATTGGCACACGCCAATATTTGCTATGACAGCAGATTTAATTCAGGCCATGAATGAGGAGTGCCTGAAGTGTGGGATGGATGGTTATGTAGCTAAGCCATTTGAAGAGGAGCAACTTTATTCGGCTGTAGCACGTTTTTTTGAGACTGCTTAACACAGTACTGCACACAGCGGCAATAACTGTTTCTTACCTCTCTGACCCAAAGGTCACTCTTATGCTAGGATGGATGGCTCCAGATTATGGCTGCCCATCTTCTGACTACTCTATCCAGCTATCAGATGGTGGATGGAGTTAATCTGGTCATGTCCTTATCTATTAATTTGTGGAATGACAACCAATGTTAGGTAGTCTTAGCAGTGGGTGTAGGCCGAAGAGGAAATCGAGCAAACGATGCATGATCCAGGGCTCCAACGGCCATAAACTAACAAATGGCTTCCTAGATGACCCTCGACTTCTTGTCAGGGATAATAGAATCGTCACGATTTTCCGAGCTGACTCCAATGATTCAACATTTATCACTAGCTGTATGTACTCTGACAGATTTAACAAAATACCAATAACTTCTAATAATCAGAAACACCAGAAAATTCATATTTGAAGGAAGGTCTGCTGCTGTTTCCAAGTATTGACATTTGAAGAGTTTGTATATTGCCATGTATACAAGAATTTGTCTTAAAATTATTTTGTTACTGTTGTCACCTATGTAATATTCTGATGTATATTTGTAAATCATTCCTGTAAGACTGCAGTTTAGTAAAGGAGTAGTTGATATTTTGTATCATTCTCCA 5171 40.98 MWRGCSGGAGVFLKLSRCLLRMSLSCKFSTANGKFPAGFKLKKAKEHLCSLNSTGKWKKKLLCFWIFAVVIVLSSWFSLRSYNVNSGTKQKTSNLFNEETRTLLRHFNMSSIGCTNDFGSDTSQLNGIACALRLLYWEQDFHKQFVWVEESEDSNVGECPIPTEKIPGNSGQLFSDDITVPFATDLSASLLSTGNQLCEKIIEQAGVGRCLLRKHWKNFCSSLIGCFWVLLGVIAFQKISGFHLKLWNKKHPKPNQPLVHQQRVLLGRKQHQQAKESPKGAGKWRKVLLRIFIVVGIVGSIWLFWYLNQTAILRREETLANMCDERARMLQDQFNVSMNHVHALAVLTSTFHHGKQPSAIDQRTFSEYTERTAFERPLTSGVAYALKVNHSEREHFEMMHGWTIKKMETEDQTLVQDCNPENLEPAPIRDEYAPVIFSQETVAHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTDLPPDATPEQRIEATVGYLGASYDIPSLVEKLLHQLASKQTIVVNVYDTTNDSAPINMYGSDFTDTGLLHISKLDFGDPLRRHEMHCRFKHKPPPPWTAINSSVGVLIITLLVGHIFRAAISRIAKVENDYHKMMKLKSRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKLLMDTNLDSNQLDFARTAHESGKDLISLINKVLDQAKIESGRLELESVPFDLRAIVDNVLSPFALKSNDKGIELAVYVSDLVPEVVIGDPGRFRQIITHLVGNSLKFTHNKGHILVSVHLADEVRGPVDFMDIVLKQGSYVVGDTSNNSCTTFSGLPVVDRWKSWENFRKFSRTDAVEEPKTIRILVTVEDTGVGIPQDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKRLVDLMEGEIGFVSEPGIGSTFSFTVSFQKGEISFLDTRRPQYAVGIGEFQGLRALIIDNSCIRAEVTRYHLQRLGISVDITLSAESAYQYLSNTSNARASTQLAMILIDRDIWDKKVGLKFHLLFKEHVDKSVTNVQMNGPKLFLLANPKSSNEQYELKSSGHVNNILSKPLQLDVLVSCFHEAFRIEKRNQVIIKKPSTLGKLLKEKHILVVDDNAVNRRVAEGALKKYGAVVTCVKCGKDAVALLNPPHNFDACFMDLQMPEMDGYEATRQVRAVESEVNAKIASGEVSTEDNKVHWHTPIFAMTADLIQAMNEECLKCGMDGYVAKPFEEEQLYSAVARFFETA 1243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31667575 31678185 + XM_039044497.1 Bhi10g01318 47659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01318 1243 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 753 923 IPR003594 -
Bhi10g01318 1243 Pfam Response regulator receiver domain 1106 1236 IPR001789 GO:0000160
Bhi10g01318 1243 ProSiteProfiles Histidine kinase domain profile. 648 925 IPR005467 -
Bhi10g01318 1243 CDD HisKA 641 702 IPR003661 GO:0000155|GO:0007165
Bhi10g01318 1243 Gene3D - 610 704 - -
Bhi10g01318 1243 ProSiteProfiles Response regulatory domain profile. 1105 1240 IPR001789 GO:0000160
Bhi10g01318 1243 SMART HisKA_10 641 706 IPR003661 GO:0000155|GO:0007165
Bhi10g01318 1243 Pfam His Kinase A (phospho-acceptor) domain 641 706 IPR003661 GO:0000155|GO:0007165
Bhi10g01318 1243 Gene3D - 705 927 IPR036890 -
Bhi10g01318 1243 CDD REC_hyHK_CKI1_RcsC-like 1106 1236 - -
Bhi10g01318 1243 Gene3D - 1099 1243 - -
Bhi10g01318 1243 PANTHER HISTIDINE KINASE 2 269 1241 - -
Bhi10g01318 1243 PANTHER TWO-COMPONENT HISTIDINE KINASE 269 1241 - -
Bhi10g01318 1243 SUPERFAMILY CheY-like 944 1082 IPR011006 -
Bhi10g01318 1243 Gene3D - 307 359 - -
Bhi10g01318 1243 ProSiteProfiles CHASE domain profile. 356 580 IPR006189 -
Bhi10g01318 1243 SMART REC_2 1104 1236 IPR001789 GO:0000160
Bhi10g01318 1243 Pfam CHASE domain 359 553 IPR006189 -
Bhi10g01318 1243 ProSiteProfiles Response regulatory domain profile. 949 1081 IPR001789 GO:0000160
Bhi10g01318 1243 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 695 921 IPR036890 -
Bhi10g01318 1243 SMART HKATPase_4 753 925 IPR003594 -
Bhi10g01318 1243 SMART CHASE_2 356 555 IPR006189 -
Bhi10g01318 1243 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 628 707 IPR036097 GO:0000155|GO:0007165
Bhi10g01318 1243 SUPERFAMILY CheY-like 1102 1240 IPR011006 -
Bhi10g01318 1243 Gene3D CHASE domain 360 587 IPR042240 -
Bhi10g01318 1243 CDD HATPase_EvgS-ArcB-TorS-like 758 921 - -
Bhi10g01318 1243 Gene3D - 944 1093 - -
Bhi10g01318 1243 PRINTS Bacterial sensor protein C-terminal signature 850 864 IPR004358 GO:0016310|GO:0016772
Bhi10g01318 1243 PRINTS Bacterial sensor protein C-terminal signature 868 878 IPR004358 GO:0016310|GO:0016772
Bhi10g01318 1243 PRINTS Bacterial sensor protein C-terminal signature 885 903 IPR004358 GO:0016310|GO:0016772
Bhi10g01318 1243 PRINTS Bacterial sensor protein C-terminal signature 909 922 IPR004358 GO:0016310|GO:0016772
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01318 Bhi-Chr10:31667575 Bhi10g01320 Bhi-Chr10:31667577 0 dispersed
Bhi10g01318 Bhi-Chr10:31667575 Bhi10g01319 Bhi-Chr10:31667577 0 tandem
Bhi09g01424 Bhi-Chr9:36130500 Bhi10g01318 Bhi-Chr10:31667575 3.87E-09 transposed
Bhi10g01318 Bhi-Chr10:31667575 Bhi05g01443 Bhi-Chr5:50593765 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2183 PF03924 CHASE 9.40E-36 CL0165 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01318 K14489 - csv:101221294 2244.16