Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01319 AAAGCAAGCCAAAATCCCACGACCCAATTGTAGAAATTTTGCCAAAGTCGAGGGGATTCTGTTCTGTTCTTAAAAGTTAAAATGAATTAATCTCTGTTGTTAAGAGGGTTGATTTTGTTTTGATCATAGCTTTCTTTTGTTTGCTTTTGCTTAACGTTCTTCACTGGATGATGAGATAATGATGTACCCACTTTGAGATAGAGAACAAGAGAAGAGAGAGAGGGGATACTTTTTTTTCTTCTTTATTTTTGGTTTGGGTTTTTTTCCCTTTTCTTTTTTTCCACTATCTGATCATTGATTCCAGTTGTTATAATTATGGAGGAACCAACTGGGTTTAACCCTCTTTGAAAAAAAAATTCCCCTTCTCGCTTCCCCTTCCCCACCATCTTATCATTGATTCCAGTTAAATTCTTGCATCACCCAACTGGGTTTTACCTCCATTCACGAGAAGTAGAGGCAAAAGGGGAGAAAAGGGTCGATACTTCTTCAAAATAACGACTGGGTTTTATCCAGTCTGTTGCCAATATGATTCGTACGAAGCTTTTAGTCGATTAACGCCAATGATTTCTATGGATTCAAGTTCTGCACAGAACCAGACTAGGGAGCTTTGGATTGGAGGACAGAACGGGGGTTCTTTTGGGTCGTTGATTAATAATTAGTCCCTGTTTCGAGTTTTTTCAAGGGGATTCTTACTTAGTGTTGAGTTTGATGAGAAGGGTCAGTGAAGAATCGGTGGTATTTCTTTAATTTGTGGCTTTTTATAGTTAAATTTTGTTTTGTTGTTTTCCGGTGGAGGATTTTTATGTGGAGGGGTTGCTCTGGCGGAGCTGGGGTTTTTCTCAAGCTCTCAAGGTGCTTACTGAGGATGTCTTTGAGCTGCAAGTTTTCTACCGCTAACGGGAAATTTCCAGCTGGGTTTAAGCTGAAGAAGGCTAAGGAACATCTATGTTCGTTAAATTCCACCGGGAAATGGAAGAAGAAGCTTCTCTGTTTTTGGATTTTTGCTGTAGTTATAGTTTTAAGCAGTTGGTTTTCCTTGCGTTCGTATAATGTGAACAGTGGAACAAAACAGAAGACCTCGAACTTGTTCAACGAAGAAACTCGAACTTTGCTGCGGCATTTCAATGTAAGCAAGAATCAACTTCAAGCTATAGCTTCCTTGTTATCCGACTCAGATCGGATGTCATCCATTGGGTGCACCAATGATTTTGGATCTGACACATCACAGTTGAATGGAATTGCCTGTGCCCTAAGGTTACTGTACTGGGAGCAAGATTTTCACAAGCAGTTTGTATGGGTTGAAGAAAGTGAAGATTCCAATGTTGGGGAGTGTCCAATTCCAACTGAGAAGATCCCTGGAAATTCTGGCCAATTATTCTCTGATGACATAACTGTTCCATTTGCTACAGACTTATCTGCCTCTTTACTCTCTACTGGAAATCAGCTTTGTGAAAAGATAATTGAACAAGCAGGAGTGGGAAGATGCCTTTTAAGAAAGCACTGGAAGAATTTTTGTAGTTCGTTGATTGGATGTTTTTGGGTTCTCCTTGGAGTGATAGCATTCCAGAAAATATCTGGTTTTCATCTAAAATTGTGGAATAAGAAACATCCAAAGCCAAACCAGCCATTGGTTCATCAACAGAGGGTCTTACTAGGGAGAAAGCAACATCAACAAGCCAAAGAGTCTCCTAAAGGAGCTGGGAAATGGCGGAAGGTGCTCCTAAGAATATTTATTGTAGTTGGAATCGTTGGGTCCATTTGGTTATTTTGGTACCTGAACCAGACAGCTATTTTGAGAAGAGAAGAAACACTTGCAAACATGTGTGATGAGCGAGCCCGGATGTTGCAGGACCAATTCAATGTTAGCATGAACCATGTTCATGCATTAGCCGTTCTTACCTCTACCTTCCACCATGGGAAACAGCCTTCTGCCATTGATCAGAGAACATTTAGTGAGTATACAGAAAGAACAGCCTTTGAAAGACCACTGACTAGTGGTGTAGCTTATGCTTTGAAAGTTAATCACTCAGAAAGGGAGCATTTTGAGATGATGCATGGATGGACGATAAAGAAAATGGAGACAGAGGACCAAACTCTTGTTCAAGATTGTAATCCAGAAAATTTGGAACCTGCACCAATTCGAGATGAATATGCACCTGTCATATTTTCTCAAGAAACGGTAGCTCATATAGTTTCTATCGACATGATGTCTGGAAAAGAAGATCGCGAGAACATCTTGCGAGCTAGGGCTTCTGGAAAGGGTGTGCTTACATCTCCTTTTAAACTCTTGAAATCTAATCACCTTGGAGTTGTCCTCACATTTGCTGTCTATAACACTGACCTCCCTCCAGATGCTACTCCTGAGCAACGTATTGAAGCTACTGTTGGTTATCTAGGTGCCTCATATGATATCCCCTCACTGGTGGAGAAGCTTTTGCATCAGCTTGCTAGCAAGCAGACAATTGTTGTGAATGTTTATGATACAACCAATGATTCTGCTCCCATCAACATGTATGGCTCTGATTTTACCGATACCGGGCTACTGCATATTAGTAAACTTGATTTTGGGGATCCTTTAAGAAGGCATGAGATGCATTGTAGATTCAAGCATAAACCTCCACCTCCTTGGACAGCTATCAATTCATCAGTAGGTGTCCTAATCATTACCTTGCTGGTTGGCCATATTTTTCGTGCAGCTATAAGTCGGATTGCAAAAGTGGAGAATGACTATCACAAGATGATGAAGCTTAAAAGTCGTGCTGAAGCTGCTGATGTGGCCAAATCACAGTTTCTGGCAACAGTTTCCCATGAGATCAGAACACCAATGAATGGTGTTTTAGGCATGCTGAAATTACTGATGGACACTAACCTTGATTCAAATCAACTGGATTTTGCCCGGACTGCTCACGAGAGTGGAAAAGATCTGATATCACTCATAAATAAGGTTCTCGATCAAGCTAAGATAGAATCAGGAAGGCTTGAACTTGAATCTGTACCTTTCGATCTGCGTGCTATAGTTGATAATGTGCTCTCACCTTTTGCACTCAAATCCAATGACAAGGGAATTGAGTTGGCTGTTTATGTCTCTGATTTGGTGCCTGAAGTTGTCATTGGTGACCCTGGACGCTTTCGTCAAATAATTACTCATCTTGTTGGAAATTCACTCAAGTTTACTCATAATAAGGGGCACATACTAGTCTCAGTGCATCTGGCTGATGAAGTGAGAGGCCCAGTTGATTTTATGGACATTGTGCTTAAACAAGGCTCATATGTAGTTGGAGACACATCAAACAATAGCTGTACTACATTTAGTGGGTTACCTGTGGTGGATAGATGGAAAAGCTGGGAAAATTTCAGAAAGTTCAGCAGGACGGATGCGGTGGAGGAACCCAAAACAATTAGAATTCTCGTGACTGTTGAGGATACAGGTGTAGGAATTCCCCAAGATGCACAAAGCCGAATATTCACTCCTTTTATGCAGGCTGATAGTTCCACTTCTCGGACGTATGGTGGCACTGGAATAGGATTGAGCATTAGCAAACGTTTGGTGGATCTCATGGAAGGGGAGATTGGGTTTGTGAGTGAGCCTGGTATAGGCAGCACATTTTCATTTACGGTTTCTTTCCAGAAAGGGGAAATAAGTTTTTTGGATACAAGGCGGCCACAGTATGCTGTGGGTATTGGAGAGTTCCAGGGGCTAAGAGCATTAATAATCGATAATAGCTGCATTCGAGCAGAGGTCACGAGATATCATCTGCAGAGACTGGGGATTTCTGTTGATATAACTCTGAGTGCAGAATCTGCTTATCAATATCTATCCAATACCTCGAATGCAAGAGCATCAACACAATTGGCCATGATTCTTATAGACAGAGACATCTGGGACAAGAAAGTTGGTCTCAAGTTCCATCTTTTGTTTAAAGAGCATGTGGATAAAAGTGTGACAAATGTCCAGATGAATGGTCCAAAGCTCTTTCTCCTGGCAAACCCCAAAAGCTCCAATGAGCAATATGAACTTAAATCTTCTGGTCATGTAAATAATATCTTAAGTAAACCTCTTCAGTTAGACGTGTTGGTGAGTTGCTTCCACGAAGCCTTTAGGATTGAGAAGAGGAATCAAGTAATTATTAAAAAACCATCTACTCTTGGAAAGCTACTGAAAGAAAAGCATATTTTGGTTGTGGATGACAATGCTGTTAACAGAAGGGTGGCAGAAGGTGCACTAAAGAAATATGGAGCCGTTGTAACTTGTGTAAAATGTGGAAAGGATGCTGTAGCTCTCCTCAACCCTCCACACAACTTTGATGCTTGCTTCATGGACCTCCAGATGCCTGAGATGGACGGGTATGAAGCTACAAGACAGGTCCGTGCTGTAGAAAGTGAGGTGAACGCGAAAATTGCATCTGGAGAAGTGTCGACTGAGGACAATAAAGTCCATTGGCACACGCCAATATTTGCTATGACAGCAGATTTAATTCAGGCCATGAATGAGGAGTGCCTGAAGTGTGGGATGGATGGTTATGTAGCTAAGCCATTTGAAGAGGAGCAACTTTATTCGGCTGTAGCACGTTTTTTTGAGACTGCTTAACACAGTACTGCACACAGCGGCAATAACTGTTTCTTACCTCTCTGACCCAAAGGTCACTCTTATGCTAGGATGGATGGCTCCAGATTATGGCTGCCCATCTTCTGACTACTCTATCCAGCTATCAGATGGTGGATGGAGTTAATCTGGTCATGTCCTTATCTATTAATTTGTGGAATGACAACCAATGTTAGGTAGTCTTAGCAGTGGGTGTAGGCCGAAGAGGAAATCGAGCAAACGATGCATGATCCAGGGCTCCAACGGCCATAAACTAACAAATGGCTTCCTAGATGACCCTCGACTTCTTGTCAGGGATAATAGAATCGTCACGATTTTCCGAGCTGACTCCAATGATTCAACATTTATCACTAGCTGTATGTACTCTGACAGATTTAACAAAATACCAATAACTTCTAATAATCAGAAACACCAGAAAATTCATATTTGAAGGAAGGTCTGCTGCTGTTTCCAAGTATTGACATTTGAAGAGTTTGTATATTGCCATGTATACAAGAATTTGTCTTAAAATTATTTTGTTACTGTTGTCACCTATGTAATATTCTGATGTATATTTGTAAATCATTCCTGTAAGACTGCAGTTTAGTAAAGGAGTAGTTGATATTTTGTATCATTCTCCA 5223 41.01 MWRGCSGGAGVFLKLSRCLLRMSLSCKFSTANGKFPAGFKLKKAKEHLCSLNSTGKWKKKLLCFWIFAVVIVLSSWFSLRSYNVNSGTKQKTSNLFNEETRTLLRHFNVSKNQLQAIASLLSDSDRMSSIGCTNDFGSDTSQLNGIACALRLLYWEQDFHKQFVWVEESEDSNVGECPIPTEKIPGNSGQLFSDDITVPFATDLSASLLSTGNQLCEKIIEQAGVGRCLLRKHWKNFCSSLIGCFWVLLGVIAFQKISGFHLKLWNKKHPKPNQPLVHQQRVLLGRKQHQQAKESPKGAGKWRKVLLRIFIVVGIVGSIWLFWYLNQTAILRREETLANMCDERARMLQDQFNVSMNHVHALAVLTSTFHHGKQPSAIDQRTFSEYTERTAFERPLTSGVAYALKVNHSEREHFEMMHGWTIKKMETEDQTLVQDCNPENLEPAPIRDEYAPVIFSQETVAHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTDLPPDATPEQRIEATVGYLGASYDIPSLVEKLLHQLASKQTIVVNVYDTTNDSAPINMYGSDFTDTGLLHISKLDFGDPLRRHEMHCRFKHKPPPPWTAINSSVGVLIITLLVGHIFRAAISRIAKVENDYHKMMKLKSRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKLLMDTNLDSNQLDFARTAHESGKDLISLINKVLDQAKIESGRLELESVPFDLRAIVDNVLSPFALKSNDKGIELAVYVSDLVPEVVIGDPGRFRQIITHLVGNSLKFTHNKGHILVSVHLADEVRGPVDFMDIVLKQGSYVVGDTSNNSCTTFSGLPVVDRWKSWENFRKFSRTDAVEEPKTIRILVTVEDTGVGIPQDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKRLVDLMEGEIGFVSEPGIGSTFSFTVSFQKGEISFLDTRRPQYAVGIGEFQGLRALIIDNSCIRAEVTRYHLQRLGISVDITLSAESAYQYLSNTSNARASTQLAMILIDRDIWDKKVGLKFHLLFKEHVDKSVTNVQMNGPKLFLLANPKSSNEQYELKSSGHVNNILSKPLQLDVLVSCFHEAFRIEKRNQVIIKKPSTLGKLLKEKHILVVDDNAVNRRVAEGALKKYGAVVTCVKCGKDAVALLNPPHNFDACFMDLQMPEMDGYEATRQVRAVESEVNAKIASGEVSTEDNKVHWHTPIFAMTADLIQAMNEECLKCGMDGYVAKPFEEEQLYSAVARFFETA 1261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31667577 31678185 + XM_039044495.1 Bhi10g01319 47660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01319 1261 CDD HATPase_EvgS-ArcB-TorS-like 776 939 - -
Bhi10g01319 1261 PRINTS Bacterial sensor protein C-terminal signature 868 882 IPR004358 GO:0016310|GO:0016772
Bhi10g01319 1261 PRINTS Bacterial sensor protein C-terminal signature 886 896 IPR004358 GO:0016310|GO:0016772
Bhi10g01319 1261 PRINTS Bacterial sensor protein C-terminal signature 903 921 IPR004358 GO:0016310|GO:0016772
Bhi10g01319 1261 PRINTS Bacterial sensor protein C-terminal signature 927 940 IPR004358 GO:0016310|GO:0016772
Bhi10g01319 1261 SUPERFAMILY CheY-like 1120 1258 IPR011006 -
Bhi10g01319 1261 SMART HKATPase_4 771 943 IPR003594 -
Bhi10g01319 1261 Gene3D - 84 126 - -
Bhi10g01319 1261 Gene3D - 325 377 - -
Bhi10g01319 1261 Gene3D - 962 1111 - -
Bhi10g01319 1261 Gene3D - 628 722 - -
Bhi10g01319 1261 Gene3D - 1117 1261 - -
Bhi10g01319 1261 Gene3D - 723 945 IPR036890 -
Bhi10g01319 1261 SMART REC_2 1122 1254 IPR001789 GO:0000160
Bhi10g01319 1261 SMART CHASE_2 374 573 IPR006189 -
Bhi10g01319 1261 CDD HisKA 659 720 IPR003661 GO:0000155|GO:0007165
Bhi10g01319 1261 Pfam Response regulator receiver domain 1124 1254 IPR001789 GO:0000160
Bhi10g01319 1261 Pfam CHASE domain 377 571 IPR006189 -
Bhi10g01319 1261 PANTHER HISTIDINE KINASE 2 50 124 - -
Bhi10g01319 1261 PANTHER HISTIDINE KINASE 2 287 1259 - -
Bhi10g01319 1261 CDD REC_hyHK_CKI1_RcsC-like 1124 1254 - -
Bhi10g01319 1261 ProSiteProfiles Response regulatory domain profile. 1123 1258 IPR001789 GO:0000160
Bhi10g01319 1261 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 941 IPR003594 -
Bhi10g01319 1261 Pfam His Kinase A (phospho-acceptor) domain 659 724 IPR003661 GO:0000155|GO:0007165
Bhi10g01319 1261 SUPERFAMILY CheY-like 962 1100 IPR011006 -
Bhi10g01319 1261 PANTHER TWO-COMPONENT HISTIDINE KINASE 50 124 - -
Bhi10g01319 1261 PANTHER TWO-COMPONENT HISTIDINE KINASE 287 1259 - -
Bhi10g01319 1261 Gene3D CHASE domain 378 605 IPR042240 -
Bhi10g01319 1261 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 646 725 IPR036097 GO:0000155|GO:0007165
Bhi10g01319 1261 SMART HisKA_10 659 724 IPR003661 GO:0000155|GO:0007165
Bhi10g01319 1261 ProSiteProfiles CHASE domain profile. 374 598 IPR006189 -
Bhi10g01319 1261 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 713 939 IPR036890 -
Bhi10g01319 1261 ProSiteProfiles Histidine kinase domain profile. 666 943 IPR005467 -
Bhi10g01319 1261 ProSiteProfiles Response regulatory domain profile. 967 1099 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01444 Bhi-Chr5:50593765 Bhi10g01319 Bhi-Chr10:31667577 0 dispersed
Bhi05g01445 Bhi-Chr5:50593765 Bhi10g01319 Bhi-Chr10:31667577 0 dispersed
Bhi10g01319 Bhi-Chr10:31667577 Bhi12g02460 Bhi-Chr12:77407907 0 dispersed
Bhi10g01318 Bhi-Chr10:31667575 Bhi10g01319 Bhi-Chr10:31667577 0 tandem
Bhi10g01319 Bhi-Chr10:31667577 Bhi10g01320 Bhi-Chr10:31667577 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2184 PF03924 CHASE 9.60E-36 CL0165 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01319 K14489 - csv:101221294 2286.15