Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01366 CATCCTATGTGTCATCTTCCACATTTCCCCTCTCTCTCTATAGCTTCCTCCAAACCCTTTTCTTTTCTTCTCAATTCTCTCCTAAAAAACCTTCTCAATCTAGTGAGAGCACAATAAGACACATTAGATCTTAAATCTTGTCTTATAATTCCCTTTGGAATTTCACTCCGCACATATATTCTAAGAGCTTCATCTTCAAAACCTAAGCTTTTTAGAATGATTGAGAAAATGGCCGACAATGAATTCTCAGATTGTTTTCTCCAAATCCCACTCCCCGGATCCAACCCTTCTCTTCTCAAGAAGAAAAGAAACCTCCCCGGAACTCCAGATCCGGAAGCCGAAGTGATAGCGTTGTCGCCAAAGACGTTGTTGGCAACGAACCGATTCGTGTGCGAAATATGCGGGAAAGGGTTTCAGAGAGACCAAAACTTGCAGCTACACAGACGAGGACATAACCTTCCATGGAAGTTAAAGCAAAGAAGTAGCAAAGAACCAAAGAAGAGAGTGTATGTTTGTCCTGAGAAAAGCTGTGTTCATCACCATCCATCAAGAGCTTTAGGAGATCTTACAGGAATAAAAAAGCACTTTTGTAGAAAGCATGGAGAGAAGAAATGGAAGTGTGAGAAATGTTCAAAGAGATACGCTGTGCAATCTGATTGGAAAGCACACTCCAAAACTTGTGGTACTAGAGAATACAAATGTGATTGTGGAACTCTATTTTCAAGGAGAGATAGCTTCATAACTCACAGGGCATTTTGCGATGCATTAGCAGAAGAAACAGCAAGAGTAAAAGCAGGAACAACAATAAGCAATAATTTCAACTATAATTTAATGGGTGGAGGGTGCATAGAAGATGAAACAGGGTTATTCACGGGCCAACATTTTGGTTCAATTTTGAAGCCAATATCAGTGAAGGAAGCAACAATGACAATAAGAAGCAATGTTCAAATGATTGGGGGGCCGATGATGATGTACGGTGAAGATGGAATTTGGGGAAACCAATTACAAATGGGTGATTATTATATTAATCATAATCAAAATCAAGGGTTAGTGATGAATAATGGAGGAGGAGTTTCTTCATTGTACAGCCATCAATGACAGCAAATGAATCAAACCCAGATGGGAAATATGTCAGCTACAGCTTTGTTGCAGAAAGCTGCTGAAATTGGGCCAACTTGTACTACTACTACTACCACTACTAGATCTGCCCCATCACTACTACAACTACAACAGGGGTTTTTGTTTAATAATGGGGGTGAGTTTTGTAATTCTTCTAGTACTACAAGTAGACCAATTATTGTTGTTGAGAATGAGAATAATGGGAATGGGAATGGGAATGAGATGTACACTGCAAAACGGCGTCGTACTCAGAGTGAATTTGAGTGTGGAAGTGGAAGTGGAACAACAGGAACAGGGGAGACGAGGGATTTTCTTGGAGTTGGTGCCAAAACTATATGTCACGCTTCAGCATCAATCAACGGATGGATTTAGATGCCAAATTTCATGTCTTTTTATATATTTTTGTGTAATATTTTCTTTTCTTTTTCGTTTCTTTGACGCAATTAGAGCAAACAAAAGTTGACAAATAAAGTGAATCAATCAAAAGATGGGAATGAGAAAAATGAGATTCAAGTATCTACATTTATATAATATATATTTGTTGAACTTT 1669 38.53 MIEKMADNEFSDCFLQIPLPGSNPSLLKKKRNLPGTPDPEAEVIALSPKTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVKAGTTISNNFNYNLMGGGCIEDETGLFTGQHFGSILKPISVKEATMTIRSNVQMIGGPMMMYGEDGIWGNQLQMGDYYINHNQNQGLVMNNGGGVSSLYSHQXQQMNQTQMGNMSATALLQKAAEIGPTCTTTTTTTRSAPSLLQLQQGFLFNNGGEFCNSSSTTSRPIIVVENENNGNGNGNEMYTAKRRRTQSEFECGSGSGTTGTGETRDFLGVGAKTICHASASINGWI 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32807749 32809622 + XM_039046165.1 Bhi10g01366 47707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01366 424 Gene3D Classic Zinc Finger 53 80 - -
Bhi10g01366 424 Gene3D Classic Zinc Finger 92 181 - -
Bhi10g01366 424 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Bhi10g01366 424 SUPERFAMILY beta-beta-alpha zinc fingers 56 153 IPR036236 -
Bhi10g01366 424 Pfam Zinc finger, C2H2 type 57 79 IPR013087 -
Bhi10g01366 424 PANTHER ZINC FINGER PROTEIN MAGPIE 24 417 - -
Bhi10g01366 424 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 24 417 - -
Bhi10g01366 424 SMART c2h2final6 133 153 IPR013087 -
Bhi10g01366 424 SMART c2h2final6 57 79 IPR013087 -
Bhi10g01366 424 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01366 Bhi-Chr10:32807749 Bhi01g02708 Bhi-Chr1:67089612 8.22E-115 dispersed
Bhi11g02111 Bhi-Chr11:59738079 Bhi10g01366 Bhi-Chr10:32807749 5.11E-113 dispersed
Bhi09g01105 Bhi-Chr9:25648364 Bhi10g01366 Bhi-Chr10:32807749 4.23E-110 transposed
Bhi10g02326 Bhi-Chr10:60367057 Bhi10g01366 Bhi-Chr10:32807749 4.55E-122 transposed
Bhi10g01366 Bhi-Chr10:32807749 Bhi05g01393 Bhi-Chr5:48916748 3.33E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2198 PF00096 zf-C2H2 0.0018 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01366 K25870 - csv:101211656 650.973