Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01369 AGTAAATTGTGAGTCCCCAATTTTGTCAACATTGAATTGTAGAGAATTGGTGTGACCTAAAAGATCTGAACGAAGAGCGAAAGCTCGACTAATTACTTCTCAACTAACCCGCTAATCTTCTTCCTCGAAGCTTTCCCCTGATTTCCAGCCAAATATTCTGCAATTTGGCGGTTGCTGCTAAGATAATTTTGGTGGTGGAAAAGCGACAGATCGATGCCGAAGGGTTTGAAGAGTAAATGTCAGTCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAATCGTGTTAATGACCTTCAAGGGATATTCACCAATCTTCAAAATGCAAGAAAGGAGAGTCGTACTACTGACGTTGCTGTCTTGGAGGAACAAGTCCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATGAACCGTCACCTGCCTCTTCATTTGTTGAGGGTAGTCTTGGATCATTCTCGCAAGAGTTAGCCCGTCTTCTTGAGCATTGTGACGAGCAAGATGATGCAACTAGTGCATTGGCTGAACCAAAGGCTGAGCCTGAACTCCATTGCGTTCTTGCCAGCAATCCATCAAATTGTGTACAGGATGGTTTTTGTATTTCAGAGCTCCAACAAGATAGTTTTCTTGGATTTGAGGAGTGCAAAGTCTCTCCTCCAGCTCTACAGAATTATTCATTTTACAAATCGGACATGGATACTCAGTCTAATTGTCAAAGTTTCAAATTAAATCAAAACTTTGAGCAGACCACGGTGGTCAGTAAGGATGATATGTCTACTTTGAATTGCCATATATTGAACTCACATCCAGAGTTCGACTATGGGGTTCTTATTGGGGCATCTGATGTGGGAGACTTTAGTCAGGACACAAAGCCCGATATTCTCCCAAATATCTCACCCCCACCATCTGCTTTTATGGGCCCAATATGTGCTCTATGGGATTGTTTCAGACCTGCTCAAGGATCTAAATGGTGTCAGGACTATTGCAGTAGCTGTCATTCTGTTCTTGCTATAAACGAAGGCCTTCCTGGAATGATTCCAATATTGCGCCCTGGGGGAATTGGATTTAAGGATGGTCCTTTGTTTGCTGCTCTTCATGCAAAGACACAGGCCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCTCCATGGAATGCTCCTGAGCTTTTTGATATTACATTTCTTGAGGGGGAGACAATCAGGGAATGGCTCTACTTCGACAAGCCTAGACGAGCCTTTGAAAGTGGCAACCGAAGGCAAAGGTCATTGCCGGATTATAGTGGCCGTGGTTGGCATGAATCAAGGAAGCTGGTGATGAAGGAGTTTGGTGGTCAGAAAAAGTCTTATTACATGGATCCACAGCCATCAAGCTTTCTTGAATGGCATTTGTACGAATATGATATCACCAATTATGATTCATTCGCATTATATAGGCTGGAACTCAAGCATGTTGATGCAAAGAAGAGTCCAAAAGGAAAACTGGCAGCTGATCCTCTGGCTGATCTGCAAAAGAAGATGGGAAGGCTTACTGCACAGGGCCCTGTTGAGCTTGGACAATCAGTTAAAGGTAAGATTACGACGAAGGTGAATAATAAAAAGCCTGATACTGCAAATATCAACCATGCTCCACATCATCAGAATATAACGAATGCTAATTGAGCAACCGATTCTTATAATGGCACATACTGGAGTCTTGCCTGCTACTGCATTTTCGTGGCAGGGTTTTACTATCAGTTTTAGTGTCAAAGTGCCTGCTTTATGTTGATATATACTCTTCGGCGCATTGTCTGGTGATCCATGGCATTTCGACCCCATTTTTTTTAATATAGAAAGGGAGATTCTGAATGCTAAATTATTCTAGAGTGGGGACTTTCATTCAATATGCAGGGAAATGCCTATTTCCAATTTGCATGAAGATGTTTGTGTTTCTGTTTGTTTATAATTAGTTTAAATGGTAAACTTTAGTTGCTCAAAAGTTGTATAGTGGTCAGTCAATTTATGTTTTAGCTGTTTGCATATTTTCACATCATAAACACAAAGCATTTGGCTTGGCCTGATTTTTTCCCATATTCCATGAATTGTAAACTTAATTTGCATAACAA 2117 41.24 MPKGLKSKCQSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHCDEQDDATSALAEPKAEPELHCVLASNPSNCVQDGFCISELQQDSFLGFEECKVSPPALQNYSFYKSDMDTQSNCQSFKLNQNFEQTTVVSKDDMSTLNCHILNSHPEFDYGVLIGASDVGDFSQDTKPDILPNISPPPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSVLAINEGLPGMIPILRPGGIGFKDGPLFAALHAKTQAKEVGIPICDGAATRKSPWNAPELFDITFLEGETIREWLYFDKPRRAFESGNRRQRSLPDYSGRGWHESRKLVMKEFGGQKKSYYMDPQPSSFLEWHLYEYDITNYDSFALYRLELKHVDAKKSPKGKLAADPLADLQKKMGRLTAQGPVELGQSVKGKITTKVNNKKPDTANINHAPHHQNITNAN 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32859100 32862668 + XM_039046819.1 Bhi10g01369 47710

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01369 486 Coils Coil 18 38 - -
Bhi10g01369 486 PANTHER TRANSCRIPTION FACTOR VOZ2 1 465 - -
Bhi10g01369 486 MobiDBLite consensus disorder prediction 465 486 - -
Bhi10g01369 486 PANTHER TRANSCRIPTION FACTOR VOZ1 1 465 IPR039277 GO:0006355|GO:0048578
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01369 - - - csv:101211467 899.427
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00348 Bhi-Chr3:7262680 Bhi10g01369 Bhi-Chr10:32859100 0 dispersed
Bhi10g01368 Bhi-Chr10:32859100 Bhi10g01369 Bhi-Chr10:32859100 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g218 . . Bda06g00389 . . . . . . . Cma02g00196 Cma20g00581 . Car20g00557 . . . . . . . . . . . . . . . . . . Cone10ag1260 . . . . Chy11g00658 . . . . . . . . Bma12g00825 . Cmo02g00199 Cmo20g00652 . . . . Cpe16g00412 Cpe05g01419 Bhi10g01369 Tan05g0925 . . Hepe08g0429 . . . . . . . . . . . . Cme11g00861
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi03g00349 . 2 482 VOZ-9 Transcription Factor Family AT1G28520 72.3 1.1e-201 700.3
Bhi03g00348 . 2 482 VOZ-9 Transcription Factor Family AT1G28520 72.3 1.1e-201 700.3
Bhi10g01369 . 6 463 VOZ-9 Transcription Factor Family AT1G28520 55.8 3.5e-134 476.1
Bhi10g01368 . 6 463 VOZ-9 Transcription Factor Family AT1G28520 55.8 3.5e-134 476.1
Bhi03g00349 . 27 422 VOZ-9 Transcription Factor Family AT2G42400 50.5 3.8e-103 372.9
Bhi03g00348 . 27 422 VOZ-9 Transcription Factor Family AT2G42400 50.5 3.8e-103 372.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005492 1 2 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 2 5 0 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2200 None None None None Bhi TF