Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01428 AGAAAAAAAAAAAAAAAAAAAAAAAAGGATTAGCTTAGAGAAGTCGATAAAGTGGATCCGGTTAGTGAAGGAAGAGCAATGGATTTGAAGACGCCATTATTAAAAGCTCGCGAGAAGCAAGAGAACTCGTAAGAAGGATTTGATTCTTTGAAGAAGAAATTGATTGGTGGAGAATAGTCAAATTCATGTTTACCCAGTTGGAAACAATGCAAGTGATCCTCCCATTATCGCTTCGCGATTCTTTTAATTCAGTGACTGGCGTGTGGTTCGATGGAAAAAAACTCTGCGGTTCAGTGATTCTTAGCTTTGACAAGCAAATCAGTAAGAGGAGAGAAATTTTGTGTTTGTTTCCTGTGAACTTGCAGTTGTTAAGTCTGTTCTGTAACAGTAGTGGTTGGTGGACATTGTCGGAGAACTGCTCGGAGTTGTAAGCGTCGATCGAAAATGATTGATGGGATCATCGGCGCAACCAGCACCACGTTGTTAAACAGCTTTTGGGCATCAAATCGGATGCTTGCATTAATTGGGAACAGGGTCCTGTTTTGGCTTAAAATCCTTTCCGACAGTCTCCAGCTTTGTGAAAGCTTGAATCAGTTAGTAGTCTTCCTGGGCCAAGGCTGGTTTGGCAGATTAAGTTTGTTGTTCGGTCATGGAGAGCTTATTAGTTCTTACATTGATTAGTTCGATATGGGCATTTCTTGCTGGTTCTGCTTGTTGCCAAAGGCCTGCGGTTGTGAACATTGGTGCAGTTTTCACTTTTGATTCAATTATAGGAAGAGCGGCAAAGGTGGCAATGGAAGCCGCAGTTTCGGATGTGAATGCAGATCCTTCCATTCTCAATGGAACAAAGCTGAATTTGGTCATGGCAGATACACATTGTAATGTTCTCTTGGGTTCTATTGGAGCTTTTCAGGTTCTTGAGAAAGATGTAGTAGCCATAGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTCTACAGATTGCTAATAATCTCCAAGTGCCTCTTATATCATATGCTGCCACTGACCCAACTTTATCTGCTCTCCAATTCCCCTTTTTCCTACGGACTACTCAGAGTGATGCCTATCAAATGACTGCTATGGCAGACTTAATTGACTTTTATGAGTGGAAGGAGGTGATCATGATCTTTGTGGATGATGATTATGGTAGAAATGGAATATCCACTTTAACTGATGAGCTTGACAAGAGGATGTTTAAAATTTCTTACAAAATACCCTTACCTTGTCATTTTAATCTCAGTGAAATCACAATCATACTCAATAACTCCAAGTTGCTTGGTCCTCGTGTCTATGTTGTTCATGTCAATCCTGATCCTAGATTAAGTATCTTCAAAATAGCCCATCAACTTGATATGATGACAAGTGATTATGTGTGGCTGGCAACAGATTGGCTTTCTACTACCTTAGATTCTGTTCTGCCCGTGCAACAAACCTCTATAAACATCCTTCAAGGTGTGGTTGTACTTCGTCAACATATTCCTGAATCCAGCCGAAAAACAACATTATGGTCTAGGTTAAGGAACATGCTGCCAGAAGACTCTAGAAATTCTTCTTTGAATGTCTATGCTCTTAGTGCCTATGATACCATTCAAGTAGTTGCACGTGCAATCGATAAGTTTCTAAATGAAGGTAGGAGCATTACCTTCTCATTGAAGAACAAGTTTCATGATTTAAATACATCTAGAATGTCCTGGGGAAAGCTCAAAATATTTGATGATGGTGCTCTACTGTTGAGCATATTGTTGCAGGCAAACTTTACTGGTTTAAGTGGTCGGATTGAGTTTAATTCAGATCGGAACGTTATCAATAGAGGCTATGAGGTGATTAATATCGATCAGATGGGACTGCGTAGAGTTGGTTATTGGTCCAATGTCACAGGCTTTACAATCCAATCTCCAGAAACTCTGAAACAGAAACGAATTGGTTATTCCCACCTGAACCAGACGCTTGGCAATGTTACCTGGCCTGGTGGAAAGAGAGAAAAACCGCGTGGATGGGTGATTGCAAACAATGAAAGACCATTAATAATTGGAGTGCCACGTAGAGTAAGTTTTGTTGAATTTGTTACTGCAGTCAATGGAAGCCACAAAAACATTGAAGGATACTGCATCGATCTGTTCAATGAAGCAAGAAAGCTGGTTCCTTATGATGTTCCTTACAGATTTATACCTTTTGGAAATGGCTCCTCCAATCCTAGTTATGATGACCTTGTGAAGAACGTTGCAAATGGTATATTTGATGCAGCTGTTGGAGATATTGCAATTGTGACCAATCGCACAAGGATCGTGGATTTTTCTCAGCCTTTTGCTTCTACCGGTCTTGTTATTGTGGCTCCAATAAAAAATTCAAAGTCAAATGCTTGGGTGTTCCTTAAACCATTTACAGTAGAGATGTGGTGCGTAACATCGGCGTCCTTTTTTATGATAGGGGCAGTCATATGGCTTCTTGAGCATCGAGTAAATGATGATTTCCGTGGTCCACCAAAAAGGCAGCTAGTGACAGTAATATTGTTCAGCTTCTCGACATTGTTTAAAACGAATCAGGAAGCTACTGTAAGTCCACTTGGACGTATGGTAATGGTGGTGTGGCTTTTCTTATTGATGGTTATCACATCAAGCTATACAGCCAGTCTCACTTCAATCCTTACAGTTCAGCAGCTTTCATCTCCCATTAAAGGACTTGATGACTTGATTACTAATGAACAGCCAATTGGCTACCAGGTAGGATCGTTTGCGTATAGCTATCTGACCGAGAGTCTTTACCTTCCACGATCGAGGCTTGTATCTCTAGGCTCTCCAGAAGAGTATGAATCAGCACTGCTGAAGGGGCCATTCAAAAAAGGAGGGGTGGCGGCTATTATAGATGAACTTCCATATATGGAATTGTTCTTATCAGGGAGGAATGATTTCGGAATGATCGGACAGCCATTCACCAAGAGTGGATGGGGATTTGCCTTTCAGAGAGGATCTCCACTTGCAGTAGACATGTCAACCGCAATTCTAAAGCTTTCTGAGAATGGAAAGCTTCAGAAGATCCATGAGAAGTGGTTTTGCAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAATCTGAGCCTAACCAACTTCAGTTGGTCAGCTTCTGGGGTCTGTATCTGTTGTGCGGCGCCTTTTCACTCGTTGCTCTTCTCATATTTTTGCTCCGCATAGTTCGACAATTTGCTCGCTACATACGACAACAGAAGGAATCTTCTCATTCAGAATTGGTGTCATCCAATTCAAACTCAAGCTGGACTCAGGTTATATATAAGTTTATCGACTTTGTTGATGAGAAGGAAGAAGCTATCAAGAGACTTTTTCGAAAGCACGATACTCAGAATCAGGCTAACCGATAGCTCTTCGATGTGTGTTAAAAATGCTTGAAGGTTAATCCTGCAGCTGTACTTGCAGTTGGAATCTCTATGTTTTAAAAATATTGTGTTCTTCCTTTGCTGCAAAGTAACCTAAAATTTAGTGTTCATGTAAATAAGACTGCAACATTATGATCCTAATTACTCCCATATTTGGGTGGTCAAATTCTGTATGATGGGACAAGTATGATATTTATGAGTGCTGTATGAAGTGGCAATTTTTTGTTTTTGTTTTTGTTTTTTGATAAAA 3659 40.5 MESLLVLTLISSIWAFLAGSACCQRPAVVNIGAVFTFDSIIGRAAKVAMEAAVSDVNADPSILNGTKLNLVMADTHCNVLLGSIGAFQVLEKDVVAIVGPQSSVVAHMVLQIANNLQVPLISYAATDPTLSALQFPFFLRTTQSDAYQMTAMADLIDFYEWKEVIMIFVDDDYGRNGISTLTDELDKRMFKISYKIPLPCHFNLSEITIILNNSKLLGPRVYVVHVNPDPRLSIFKIAHQLDMMTSDYVWLATDWLSTTLDSVLPVQQTSINILQGVVVLRQHIPESSRKTTLWSRLRNMLPEDSRNSSLNVYALSAYDTIQVVARAIDKFLNEGRSITFSLKNKFHDLNTSRMSWGKLKIFDDGALLLSILLQANFTGLSGRIEFNSDRNVINRGYEVINIDQMGLRRVGYWSNVTGFTIQSPETLKQKRIGYSHLNQTLGNVTWPGGKREKPRGWVIANNERPLIIGVPRRVSFVEFVTAVNGSHKNIEGYCIDLFNEARKLVPYDVPYRFIPFGNGSSNPSYDDLVKNVANGIFDAAVGDIAIVTNRTRIVDFSQPFASTGLVIVAPIKNSKSNAWVFLKPFTVEMWCVTSASFFMIGAVIWLLEHRVNDDFRGPPKRQLVTVILFSFSTLFKTNQEATVSPLGRMVMVVWLFLLMVITSSYTASLTSILTVQQLSSPIKGLDDLITNEQPIGYQVGSFAYSYLTESLYLPRSRLVSLGSPEEYESALLKGPFKKGGVAAIIDELPYMELFLSGRNDFGMIGQPFTKSGWGFAFQRGSPLAVDMSTAILKLSENGKLQKIHEKWFCKMGCPGERRRKSEPNQLQLVSFWGLYLLCGAFSLVALLIFLLRIVRQFARYIRQQKESSHSELVSSNSNSSWTQVIYKFIDFVDEKEEAIKRLFRKHDTQNQANR 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34383226 34389994 + XM_039045200.1 Bhi10g01428 47769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01428 914 SUPERFAMILY Periplasmic binding protein-like II 444 808 - -
Bhi10g01428 914 Gene3D - 578 710 - -
Bhi10g01428 914 Gene3D - 470 577 - -
Bhi10g01428 914 PIRSF IGluLR_plant 1 914 IPR017103 -
Bhi10g01428 914 SMART GluR_14 467 810 IPR001320 GO:0015276|GO:0016020
Bhi10g01428 914 Pfam Bacterial extracellular solute-binding proteins, family 3 487 808 IPR001638 -
Bhi10g01428 914 Gene3D - 47 394 - -
Bhi10g01428 914 Pfam Receptor family ligand binding region 46 403 IPR001828 -
Bhi10g01428 914 PANTHER GLUTAMATE RECEPTOR 3.7 13 911 - -
Bhi10g01428 914 CDD PBP1_GABAb_receptor_plant 30 420 IPR044440 -
Bhi10g01428 914 CDD GluR_Plant 464 808 - -
Bhi10g01428 914 SUPERFAMILY Periplasmic binding protein-like I 22 457 IPR028082 -
Bhi10g01428 914 Gene3D - 144 418 - -
Bhi10g01428 914 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 911 - -
Bhi10g01428 914 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276|GO:0016020
Bhi10g01428 914 Gene3D - 757 815 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01319 Bhi-Chr5:46368948 Bhi10g01428 Bhi-Chr10:34383226 0 dispersed
Bhi10g01428 Bhi-Chr10:34383226 Bhi10g01430 Bhi-Chr10:34383226 0 dispersed
Bhi10g01428 Bhi-Chr10:34383226 Bhi10g01429 Bhi-Chr10:34383226 0 tandem
Bhi10g01428 Bhi-Chr10:34383226 Bhi05g01318 Bhi-Chr5:46368948 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01428 K05387 - csv:101215715 1710.66