Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01434 AGTTAGGGTGTGAGAATGATTCTTTTCTTGGGATGGCAACACTGTTGTGAGAGCTTGTGAATTCTGTTTCTTGGCAAAAAGTGAAGAGTATAAGAACATGAAGTTGAACTTGTATTTTTCCCATTTTTGAGCTCTTTTGTGAACTCCAAATCATTTCTTCTAAAGTTCAGCATAATATTTTGTGAAGTCGGGCCTTCAGCCAGGATTGTACAGAGGGTTTTGATATCTTCAACAGGCGGTGGTTAGGGGAATCAATTCGTTCATATATATTTGTTGTGCAATGAAGGTGTTTTGGATGAGGAGGAGTGGCCATTGGGTCAAAACCAAAGTGATGCTATTTGCATTGTTCATTGGGATGTGGATGCCTTTTAGAGTGATTGGTGTCTCTAGAAACACTAGTGTTTCTGTTTCTTCTTCTAATCCAAGGGTGTTGAATCTTGGAGTTCTGTTCACCCTCGATTCGGTTATTGGAAGGTCTGCGCAGCCTGCAATTTTAGCTGCTGTGGACGATGTCAATGCTGATAACAACATTCTTCCAGGGACAAAGCTGAACTTGATCCTACACGACACGAACTGCAGTGGATTTCTTGGAACTGTGGAAGCCTTGCAGTTGATGGAAGATGGAGTGGTTGCTGCTATTGGGCCACAATCTTCGGGCATCGCTCACGTCATTTCCCATGTTATTAATGAACTCCATATACCGCTTCTATCATTTGGAGCTACAGATCCTGCTTTATCTGCACAACAATACCAGTATTTCGTTCGCACCACACAGAATGATTACTTCCAGATGAATGCAATTGCTGATATGGTAGATTATTTTCGATGGAGAGAGGTTGTTGCCATTTTTATAGATGATGATAATGGCAGGAGCGGGATATCAGCATTGAGCGATGCCTTGGCGAAGAAGCGAGCTAAGATCTCATATAAGGCTGCCTTTCCTCCTGGATCCCCCAATAGCGTAATAAATGACTTGTTGGTTTCAATAAACCTGATGGAATCTCGGGTTTACGTTGTACACGTCAATCCTGACACTGGTTTATCAGTATTTTCAATGGCTAAGAAACTTCAGATGATGGGTAGTGGCTATGTCTGGATTGCAACAGATTGGCTTCCTACTTTTCTTGATTCTTTTGAAACAAATAGTCCTGAGGTAATGAATCAGTTACAAGGTGTTGTTGCTCTTCGTCACCACACACCCGATGGCGATCTGAAGAAAAACTTTGTTTCCAAGTGGAGGAATCTAAAATATAAGAAGAGTTCAAACTTCAACTCTTATGCACTCTATGCATACGACTCTGTTTGGTTAGCAGCCCGTGCTCTCGACACATTTATTAAAGAAGGTGGAAATATATCCTTTTCCAACGACCCGAAGTTACGTGAAAACAATGAAAGCACATTGCACTTAAAATCCCTCAGAGTGTTTAATGGTGGCGAACAACTTCTACAGACAATTAAGAGAACGAACTTCACAGGTGTAAGTGGGCAAATTCAATTTGGTGATGATAGAAATTTGATCCATCCAGCTTATGATATCCTAAACATTGGGGGAACTGGTTCACGTAGAATTGGTTATTGGTCAAATTATTCTGGTCTGTCAACTATTGCACCAGAAAACTTGTATACTAAGCCTCTTAATGCTTCCCCAAATAATCATCTCTACAGTGTCATATGGCCGGGTGAAGTAACAACCGTTCCTCGAGGATGGGTGTTCCCACACAATGGGAAACCATTACAAATTGTAGTACCTAACCGAGTGAGTTACAAAGCCTTTGTGTCTAAAGACAAGAACCCTCCAGGTGTTAAAGGATATTGTATAGATGTGTTTGAAGCTGCCATAAACTTGTTGCCTTATCCAGTTCCTCACACATATATCTTATATGGAGATGGAAAGGACACTCCTGAGTACAGCAATCTTGTATATGAAGTTTCACAGAATAAATACGATGCAGCTGTTGGAGATATTACTATTGTAACGAATAGGACGAAGATTGTAGACTTTACACAGCCATTTATGGAATCGGGACTTGTTGTAGTTACTGTCGTCAAAGAGGAGAAGTCCAGTCCATGGGCTTTTCTTAGGCCGTTTACTGTACAAATGTGGGCTGTCACTGCAATATTCTTTATTTTTGTTGGAGCAGTTGTCTGGATTCTCGAGCACCGGAATAATGAAGAGTTCCGTGGTCCACCCAGGCAACAACTAATTACAATATTTTGGTTTAGTTTCTCGACGATGTTCTTTTCTCACAAGGAAAACACTGTGAGCACCCTCGGACGGTTGGTGCTGATAATATGGCTCTTTGTTGTGTTAATTATAAACTCGAGCTATACAGCTAGTTTGACGTCGATCTTAACGGTGCAACAACTAACGTCAAAAATTGAAGGGATTGATAGCTTAATCTCCAACACAGATGCCATTGGAGTTCAAGAAGGATCATTTGCATTGAATTATCTGATTAATGAGCTGAATATAGCAGCATCTAGAATCATTAAACTAAAAAATCAGGAGGAATATATCGATGCTCTTAAGCGTGGATCGGGAAATGGCGGGGTTGCTGCCATTGTTGACGAGCTTCCTTACGTTGAGCTTTTCTTGGCTGGTACCAATTGCATATTCAGGACAGTTGGACAAGAGTTCACCAAAAGCGGGTGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCAGTTGATTTGTCAACAGCCATTCTTCAACTCTCAGAGAATGGTGATCTTCAAAAGATCCACGACAAATGGCTGCCACGAACTGAGTGCTCGATGAGCTTGAACCAAGTCGACGTAAACCAACTATCATTGAGTAGCTTTTGGGGATTGTTCCTAATATGTGGCATTGCATGCTTTATTGCTCTTTCCATATTCTTCTTTCGAGTATTATTCCAATACCGAAGATTTACCCCGGAAACCCAGCCTGAAGTTGAGGAGATTGAACCTGTTAGGACGAGACGCCTTAGTCGTACAACTAGCTTCATGCACTTTGTAGATAAAAAAGAAGCAGAAGTCAAAAGCAAGCTTAAAAAAAAAGCAAGTGATAACAAACAAGCTAGCCAAAGCTCAGAGAGCCATCCTGATTCACCTCCTTAATTTATGGTTGTCCATATAAATCTTTTACATTGCATCAGTTCAATCTTTATATATATATATATATTGTGATTTTTCC 3176 40.81 MKVFWMRRSGHWVKTKVMLFALFIGMWMPFRVIGVSRNTSVSVSSSNPRVLNLGVLFTLDSVIGRSAQPAILAAVDDVNADNNILPGTKLNLILHDTNCSGFLGTVEALQLMEDGVVAAIGPQSSGIAHVISHVINELHIPLLSFGATDPALSAQQYQYFVRTTQNDYFQMNAIADMVDYFRWREVVAIFIDDDNGRSGISALSDALAKKRAKISYKAAFPPGSPNSVINDLLVSINLMESRVYVVHVNPDTGLSVFSMAKKLQMMGSGYVWIATDWLPTFLDSFETNSPEVMNQLQGVVALRHHTPDGDLKKNFVSKWRNLKYKKSSNFNSYALYAYDSVWLAARALDTFIKEGGNISFSNDPKLRENNESTLHLKSLRVFNGGEQLLQTIKRTNFTGVSGQIQFGDDRNLIHPAYDILNIGGTGSRRIGYWSNYSGLSTIAPENLYTKPLNASPNNHLYSVIWPGEVTTVPRGWVFPHNGKPLQIVVPNRVSYKAFVSKDKNPPGVKGYCIDVFEAAINLLPYPVPHTYILYGDGKDTPEYSNLVYEVSQNKYDAAVGDITIVTNRTKIVDFTQPFMESGLVVVTVVKEEKSSPWAFLRPFTVQMWAVTAIFFIFVGAVVWILEHRNNEEFRGPPRQQLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSKIEGIDSLISNTDAIGVQEGSFALNYLINELNIAASRIIKLKNQEEYIDALKRGSGNGGVAAIVDELPYVELFLAGTNCIFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLPRTECSMSLNQVDVNQLSLSSFWGLFLICGIACFIALSIFFFRVLFQYRRFTPETQPEVEEIEPVRTRRLSRTTSFMHFVDKKEAEVKSKLKKKASDNKQASQSSESHPDSPP 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34415563 34421771 + XM_039044922.1 Bhi10g01434 47775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01434 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 64 80 - -
Bhi10g01434 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 124 152 - -
Bhi10g01434 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 255 278 - -
Bhi10g01434 939 SUPERFAMILY Periplasmic binding protein-like II 461 827 - -
Bhi10g01434 939 Pfam Ligand-gated ion channel 827 859 IPR001320 GO:0015276|GO:0016020
Bhi10g01434 939 Gene3D - 479 594 - -
Bhi10g01434 939 Gene3D - 70 414 - -
Bhi10g01434 939 PANTHER GLUTAMATE RECEPTOR 3.4 39 922 - -
Bhi10g01434 939 CDD PBP1_GABAb_receptor_plant 52 440 IPR044440 -
Bhi10g01434 939 Pfam Bacterial extracellular solute-binding proteins, family 3 495 826 IPR001638 -
Bhi10g01434 939 SUPERFAMILY Periplasmic binding protein-like I 45 477 IPR028082 -
Bhi10g01434 939 Gene3D - 779 833 - -
Bhi10g01434 939 SMART GluR_14 486 828 IPR001320 GO:0015276|GO:0016020
Bhi10g01434 939 Pfam Receptor family ligand binding region 68 423 IPR001828 -
Bhi10g01434 939 Gene3D - 166 439 - -
Bhi10g01434 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 922 - -
Bhi10g01434 939 Gene3D - 595 734 - -
Bhi10g01434 939 MobiDBLite consensus disorder prediction 913 939 - -
Bhi10g01434 939 CDD GluR_Plant 483 826 - -
Bhi10g01434 939 PIRSF IGluLR_plant 13 938 IPR017103 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01434 Bhi-Chr10:34415563 Bhi10g01436 Bhi-Chr10:34415563 0 dispersed
Bhi10g01434 Bhi-Chr10:34415563 Bhi10g01435 Bhi-Chr10:34415563 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01434 K05387 - csv:101215485 1684.85