Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01440 GTGGGTGCCTTTGAGGGTACCATGTGACAGAAGGGAGGATAATAACAAAAGGAACATATGGGGATTTTTTTAAACCAAAATTCAAGTGAGAATTTGAGAGAACAAGAAATGGAGGCAAAGTTTCAGAATAGTTGAAGACTTCGTGGGAGATGAGCTCAACATCTTGGCTTTGGAAATAGGGATGCTGATAATGGTGTGTAAAGTTCTTCTCCAGCCAGGATTGTTCAGAGGGTTTTGATATCTTCAACAGGCGGTGGTTAGGGGAATCAATTCGTTCATATATATTTGTTGTGCTATGAAGGTGTTTTGGATTAGGAGGAGTGGCCATTGGGTCAAAACCAAAGTGATGCTATTTGCATTGTTCATTGGGATGTGGATGCCTTTTGGAGTGATTGGTGTCTCTAGAAACACTAGTGTTTCCGTTTCTTCTTCTAATCCAAGGGTGTTGAATCTTGGAGTTCTGTTCACCCTCGATTCGGTTATTGGAAGGTCTGCACAGCCTGCAATTTTAGCTGCCGTTGACGACGTCAATGCCAATAACAACATTCTTCCAGGAACAAAGCTGAACTTGATCCTACACGACACGAACTGTAGCGGATTTCTTGGAACTGTGGAAGCCTTGCAGTTAATGGAAGATGAAGTGGTTGCTGCTATTGGGCCGCAATCTTCGGGCATCGCTCACGTCATTTCGCATGTTATTAATGAACTTCATATACCGCTTCTATCATTTGGAGCTACAGATCCTGCTTTGTCTGCACAACAATACCAATATTTTGTTCGGACCACACAGAGTGATTACTTCCAGATGAATGCAATTGCTGATATGGTAGATTATTTTGGATGGAGAGAGGTCGTTGCCATTTTTGTAGATGATGATAATGGCAGGAGTGGGATATCGGTATTGAGCGATGCCTTAGCGAAGAAGCGAGCCAAGATCTCATATAAGGCTGCCTTTCCTCCTGGATCACTCAATAGCGAAATAAGTGAATTGTTGGTTTCAATAAACTTGATGGAATCTCGAGTTTACGTTGTACACGTCAATCCTGACACTGGTTTATCGGTATTTTCGATAGCTAAGAAACTTCAGATGATGGGTAGTGGTTATGTCTGGATCGCAACAGATTGGCTTCCTTCTTTTCTTGATTCTTTTGAAACAATTAGTCCTGAGGTAATGAATCAGTTACAAGGTGTTCTTGCTCTTCGCCACCACACCCCCGATGGCGATCTGAAGAAAAACTTTGTCTCCAAGTGGAGGAATCTAAAATACAAGAAGAGTCCAAACTTCAACTCTTATGCACTCTATGCATACGACTCTGTTTGGTTAGCAGCCCGTGCTCTCGACATGTTTATTAAAGAAGGTGGAAATATATCCTTTTCCAACGACCCGAAGTTACGTGAAAACAATGGAAGCATGTTGCACTTAAAATCCCTCCGAGTGTTTAACGGTGGTGAACAACTTCTACAGACAATTAAGAGAACGAACTTCACAGGTATAAGTGGGCAAATTCAATTTGGTGATGATAGAAATTTGATCCATCCAGCTTATGATATCCTGAACATTGGGGGAACTGGTTCACGTAGAATTGGTTATTGGTCAAATTATTCTGGTCTGTCAACTATTGCACCAGAAAACTTATATACCAAGCCTCTTAATGCTTCCTCAACAAACCATCTCTATAGTGTCATATGGCCGGGTGAAGTAACGACCATTCCCCGAGGATGGGTGTTTCCACACAATGGGAAACCATTACAAATTGTAGTACCTAACCGAGTGAGTTATAAAGCCTTTGTGTCTAAAGACCAGAACCCTCCAGGTGTTAAAGGATATTGTATAGATGTGTTTGAAGCTGCCATAAACTTGTTGCCTTATCCAGTTCCTCGCATATATATATTATATGGAGATGGAAAAGACACTCCTGAGTACAACGATCTTGTATATGAAGTTTCACAGAATAAATATGATGCAGTTGTTGGAGATATTACTATTGTAACGAATAGGACGAAGATTGTAGACTTCACACAGCCATTTATGGAGTCGGGACTTGTTGTAGTTACTGTCGTCAAAGAGGAGAAGTCCAGTCCATGGGCTTTTCTCAGGCCGTTTACTATTCAAATGTGGGTTGTCACTGCAATATTCTTTATTTTTGTTGGAGCAGTTGTCTGGATTCTTGAGCACCGGACTAATGAAGAGTTCCGTGGTCCGCCGAGGCAACAACTAATTACAATATTTTGGTTTAGTTTCTCAACGATGTTCTTTTCTCACAAGGAAAACACTGTAAGCACCCTCGGACGGTTGGTGCTGATAATATGGCTCTTTGTTGTGTTAATTATCAACTCGAGCTACACAGCTAGTTTGACGTCGATCTTAACAGTGCAACAGTTAACGTCAAAGATTGAAGGGATTGATAGCTTAATCTCTAGCACAGATGCCATTGGAGTTCAAGAAGGGTCATTTGCATTGAATTATTTGATTGATGAGCTCAATATAGCAGCATCTAGGATCGTTAAACTGAAAAATCAGGAGGAATATGTTGATGCTCTTCGGCGTGGACCGGGAAATGGCGGAGTTGCTGCAATTGTTGACGAGCTTCCTTACGTTGAGCTTTTTTTGGCTGGTACCAATTGCATATTCAGGACAGTTGGACAAGAGTTCACCAAAAGCGGGTGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCAGTTGATTTGTCAACAGCCATTCTTCAACTCTCAGAGAATGGTGATCTTCAAAAGATCCACGACAAATGGCTCTCAAGAACCGAGTGTTCGATGAGCCTAAACCAAGTCGACGTAAACCAACTATCACTGAGAAGCTTTTGGGGATTGTTCCTAATTTGTGGCATTGCCTGCTTTGTTGCTCTTTCCATATTCTTCTTTCGAGTACTATTCCAATACCGAAGATTTACCCCGGAAACCCAGCCTGAAGTCGGGGAAATTGAACCTGTTAGGACGAGACGCCTTAGTCGTACAACCAGCTTCATGCACTTTGTAGATAAAAAAGAAGCAGAAGTCAAAGGCAAGCTTAAAAGAAAATCCAGTGATAACAAACAAGCTAGCCAGAGCTCAGAGGGCCACCCTGATTCACCTCCTTGATTTATGGGAAGCGTAGATATTCACGTTTATGTTTTCAACCGCTCTTATTTATATTTACTTCTCTACAATTATTTTATGAAGCCTAGCATGTTTTAAATTACACTTATTTTATATTTAGTTTTGTGTTTCTAATCACAACTTCGTGAATTTGACACTTTTATAAAAAGTAATAAACTACAGCTCACTGGCTTATTAGCTCGTC 3317 41.15 MKVFWIRRSGHWVKTKVMLFALFIGMWMPFGVIGVSRNTSVSVSSSNPRVLNLGVLFTLDSVIGRSAQPAILAAVDDVNANNNILPGTKLNLILHDTNCSGFLGTVEALQLMEDEVVAAIGPQSSGIAHVISHVINELHIPLLSFGATDPALSAQQYQYFVRTTQSDYFQMNAIADMVDYFGWREVVAIFVDDDNGRSGISVLSDALAKKRAKISYKAAFPPGSLNSEISELLVSINLMESRVYVVHVNPDTGLSVFSIAKKLQMMGSGYVWIATDWLPSFLDSFETISPEVMNQLQGVLALRHHTPDGDLKKNFVSKWRNLKYKKSPNFNSYALYAYDSVWLAARALDMFIKEGGNISFSNDPKLRENNGSMLHLKSLRVFNGGEQLLQTIKRTNFTGISGQIQFGDDRNLIHPAYDILNIGGTGSRRIGYWSNYSGLSTIAPENLYTKPLNASSTNHLYSVIWPGEVTTIPRGWVFPHNGKPLQIVVPNRVSYKAFVSKDQNPPGVKGYCIDVFEAAINLLPYPVPRIYILYGDGKDTPEYNDLVYEVSQNKYDAVVGDITIVTNRTKIVDFTQPFMESGLVVVTVVKEEKSSPWAFLRPFTIQMWVVTAIFFIFVGAVVWILEHRTNEEFRGPPRQQLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSKIEGIDSLISSTDAIGVQEGSFALNYLIDELNIAASRIVKLKNQEEYVDALRRGPGNGGVAAIVDELPYVELFLAGTNCIFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSRTECSMSLNQVDVNQLSLRSFWGLFLICGIACFVALSIFFFRVLFQYRRFTPETQPEVGEIEPVRTRRLSRTTSFMHFVDKKEAEVKGKLKRKSSDNKQASQSSEGHPDSPP 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34454116 34460275 + XM_039045371.1 Bhi10g01440 47781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01440 939 Pfam Ligand-gated ion channel 828 859 IPR001320 GO:0015276|GO:0016020
Bhi10g01440 939 PANTHER GLUTAMATE RECEPTOR 3.4 39 920 - -
Bhi10g01440 939 SUPERFAMILY Periplasmic binding protein-like I 45 477 IPR028082 -
Bhi10g01440 939 SMART GluR_14 486 828 IPR001320 GO:0015276|GO:0016020
Bhi10g01440 939 Gene3D - 479 594 - -
Bhi10g01440 939 PIRSF IGluLR_plant 13 937 IPR017103 -
Bhi10g01440 939 Gene3D - 166 439 - -
Bhi10g01440 939 CDD PBP1_GABAb_receptor_plant 52 440 IPR044440 -
Bhi10g01440 939 Gene3D - 595 724 - -
Bhi10g01440 939 SUPERFAMILY Periplasmic binding protein-like II 460 827 - -
Bhi10g01440 939 Pfam Bacterial extracellular solute-binding proteins, family 3 540 827 IPR001638 -
Bhi10g01440 939 Pfam Receptor family ligand binding region 68 423 IPR001828 -
Bhi10g01440 939 Gene3D - 725 830 - -
Bhi10g01440 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 920 - -
Bhi10g01440 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 64 80 - -
Bhi10g01440 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 124 152 - -
Bhi10g01440 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 255 278 - -
Bhi10g01440 939 MobiDBLite consensus disorder prediction 913 939 - -
Bhi10g01440 939 CDD GluR_Plant 483 826 - -
Bhi10g01440 939 Gene3D - 70 414 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01438 Bhi-Chr10:34415563 Bhi10g01440 Bhi-Chr10:34454116 0 dispersed
Bhi10g01440 Bhi-Chr10:34454116 Bhi10g01442 Bhi-Chr10:34454116 0 dispersed
Bhi10g01439 Bhi-Chr10:34454116 Bhi10g01440 Bhi-Chr10:34454116 0 tandem
Bhi10g01440 Bhi-Chr10:34454116 Bhi10g01441 Bhi-Chr10:34454116 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01440 K05387 - csv:101215485 1695.25