Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01443 GTTATTGGAAGGTCTGCACAGCCTGCAATTTTAGCTGCCGTTGACGACGTCAATGCCAATAACAACATTCTTCCAGGAACAAAGCTGAACTTGATCCTACACGACACGAACTGTAGCGGATTTCTTGGAACTGTGGAAGTTAATGGAAGATGAAGTGGTTGCTGCTATTGGGCCGCAATCTTCGGGCATCGCTCACGTCATTTCGCATGTTATTAATGAACTTCATATACCGCTTCTATCATTTGGAGCTACAGATCCTGCTTTGTCTGCACAACAATACCAATATTTTGTTCGGACCACACAGAGTGATTACTTCCAGATGAATGCAATTGCTGATATGGTAGATTATTTTGGATGGAGAGAGGTCGTTGCCATTTTTGTAGATGATGATAATGGCAGGAGTGGGATATCGGTATTGAGCGATGCCTTAGCGAAGAAGCGAGCCAAGATCTCATATAAGGCTGCCTTTCCTCCTGGATCACTCAATAGCGAAATAAGTGAATTGTTGGTTTCAATAAACTTGATGGAATCTCGAGTTTACGTTGTACACGTCAATCCTGACACTGGTTTATCGGTATTTTCGATAGCTAAGAAACTTCAGATGATGGGTAGTGGTTATGTCTGGATCGCAACAGATTGGCTTCCTTCTTTTCTTGATTCTTTTGAAACAATTAGTCCTGAGGTAATGAATCAGTTACAAGGTGTTCTTGCTCTTCGCCACCACACCCCCGATGGCGATCTGAAGAAAAACTTTGTCTCCAAGTGGAGGAATCTAAAATACAAGAAGAGTCCAAACTTCAACTCTTATGCACTCTATGCATACGACTCTGTTTGGTTAGCAGCCCGTGCTCTCGACATGTTTATTAAAGAAGGTGGAAATATATCCTTTTCCAACGACCCGAAGTTACGTGAAAACAATGGAAGCATGTTGCACTTAAAATCCCTCCGAGTGTTTAACGGTGGTGAACAACTTCTACAGACAATTAAGAGAACGAACTTCACAGGTATAAGTGGGCAAATTCAATTTGGTGATGATAGAAATTTGATCCATCCAGCTTATGATATCCTGAACATTGGGGGAACTGGTTCACGTAGAATTGGTTATTGGTCAAATTATTCTGGTCTGTCAACTATTGCACCAGAAAACTTATATACCAAGCCTCTTAATGCTTCCTCAACAAACCATCTCTATAGTGTCATATGGCCGGGTGAAGTAACGACCATTCCCCGAGGATGGGTGTTTCCACACAATGGGAAACCATTACAAATTGTAGTACCTAACCGAGTGAGTTATAAAGCCTTTGTGTCTAAAGACCAGAACCCTCCAGGTGTTAAAGGATATTGTATAGATGTGTTTGAAGCTGCCATAAACTTGTTGCCTTATCCAGTTCCTCGCATATATATATTATATGGAGATGGAAAAGACACTCCTGAGTACAACGATCTTGTATATGAAGTTTCACAGAATAAATATGATGCAGTTGTTGGAGATATTACTATTGTAACGAATAGGACGAAGATTGTAGACTTCACACAGCCATTTATGGAGTCGGGACTTGTTGTAGTTACTGTCGTCAAAGAGGAGAAGTCCAGTCCATGGGCTTTTCTCAGGCCGTTTACTATTCAAATGTGGGTTGTCACTGCAATATTCTTTATTTTTGTTGGAGCAGTTGTCTGGATTCTTGAGCACCGGACTAATGAAGAGTTCCGTGGTCCGCCGAGGCAACAACTAATTACAATATTTTGGTTTAGTTTCTCAACGATGTTCTTTTCTCACAAGGAAAACACTGTAAGCACCCTCGGACGGTTGGTGCTGATAATATGGCTCTTTGTTGTGTTAATTATCAACTCGAGCTACACAGCTAGTTTGACGTCGATCTTAACAGTGCAACAGTTAACGTCAAAGATTGAAGGGATTGATAGCTTAATCTCTAGCACAGATGCCATTGGAGTTCAAGAAGGGTCATTTGCATTGAATTATTTGATTGATGAGCTCAATATAGCAGCATCTAGGATCGTTAAACTGAAAAATCAGGAGGAATATGTTGATGCTCTTCGGCGTGGACCGGGAAATGGCGGAGTTGCTGCAATTGTTGACGAGCTTCCTTACGTTGAGCTTTTTTTGGCTGGTACCAATTGCATATTCAGGACAGTTGGACAAGAGTTCACCAAAAGCGGGTGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCAGTTGATTTGTCAACAGCCATTCTTCAACTCTCAGAGAATGGTGATCTTCAAAAGATCCACGACAAATGGCTCTCAAGAACCGAGTGTTCGATGAGCCTAAACCAAGTCGACGTAAACCAACTATCACTGAGAAGCTTTTGGGGATTGTTCCTAATTTGTGGCATTGCCTGCTTTGTTGCTCTTTCCATATTCTTCTTTCGAGTACTATTCCAATACCGAAGATTTACCCCGGAAACCCAGCCTGAAGTCGGGGAAATTGAACCTGTTAGGACGAGACGCCTTAGTCGTACAACCAGCTTCATGCACTTTGTAGATAAAAAAGAAGCAGAAGTCAAAGGCAAGCTTAAAAGAAAATCCAGTGATAACAAACAAGCTAGCCAGAGCTCAGAGGGCCACCCTGATTCACCTCCTTGATTTATGGGAAGCGTAGATATTCACGTTTATGTTTTCAACCGCTCTTATTTATATTTACTTCTCTACAATTATTTTATGAAGCCTAGCATGTTTTAAATTACACTTATTTTATATTTAGTTTTGTGTTTCTAATCACAACTTCGTGAATTTGACACTTTTATAAAAAGTAATAAACTACAGCTCACTGGCTTATTAGCTCGTC 2831 41.05 MEDEVVAAIGPQSSGIAHVISHVINELHIPLLSFGATDPALSAQQYQYFVRTTQSDYFQMNAIADMVDYFGWREVVAIFVDDDNGRSGISVLSDALAKKRAKISYKAAFPPGSLNSEISELLVSINLMESRVYVVHVNPDTGLSVFSIAKKLQMMGSGYVWIATDWLPSFLDSFETISPEVMNQLQGVLALRHHTPDGDLKKNFVSKWRNLKYKKSPNFNSYALYAYDSVWLAARALDMFIKEGGNISFSNDPKLRENNGSMLHLKSLRVFNGGEQLLQTIKRTNFTGISGQIQFGDDRNLIHPAYDILNIGGTGSRRIGYWSNYSGLSTIAPENLYTKPLNASSTNHLYSVIWPGEVTTIPRGWVFPHNGKPLQIVVPNRVSYKAFVSKDQNPPGVKGYCIDVFEAAINLLPYPVPRIYILYGDGKDTPEYNDLVYEVSQNKYDAVVGDITIVTNRTKIVDFTQPFMESGLVVVTVVKEEKSSPWAFLRPFTIQMWVVTAIFFIFVGAVVWILEHRTNEEFRGPPRQQLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSKIEGIDSLISSTDAIGVQEGSFALNYLIDELNIAASRIVKLKNQEEYVDALRRGPGNGGVAAIVDELPYVELFLAGTNCIFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLSRTECSMSLNQVDVNQLSLRSFWGLFLICGIACFVALSIFFFRVLFQYRRFTPETQPEVGEIEPVRTRRLSRTTSFMHFVDKKEAEVKGKLKRKSSDNKQASQSSEGHPDSPP 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34455563 34460275 + XM_039045375.1 Bhi10g01443 47784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01443 828 Pfam Ligand-gated ion channel 717 748 IPR001320 GO:0015276|GO:0016020
Bhi10g01443 828 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 809 - -
Bhi10g01443 828 SMART GluR_14 375 717 IPR001320 GO:0015276|GO:0016020
Bhi10g01443 828 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi10g01443 828 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi10g01443 828 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi10g01443 828 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi10g01443 828 Pfam Receptor family ligand binding region 3 312 IPR001828 -
Bhi10g01443 828 Pfam Bacterial extracellular solute-binding proteins, family 3 429 716 IPR001638 -
Bhi10g01443 828 Gene3D - 368 483 - -
Bhi10g01443 828 Gene3D - 614 719 - -
Bhi10g01443 828 SUPERFAMILY Periplasmic binding protein-like II 349 716 - -
Bhi10g01443 828 Gene3D - 1 303 - -
Bhi10g01443 828 Gene3D - 484 613 - -
Bhi10g01443 828 PANTHER GLUTAMATE RECEPTOR 3.4 1 809 - -
Bhi10g01443 828 CDD PBP1_GABAb_receptor_plant 4 329 IPR044440 -
Bhi10g01443 828 Gene3D - 55 328 - -
Bhi10g01443 828 MobiDBLite consensus disorder prediction 802 828 - -
Bhi10g01443 828 CDD GluR_Plant 372 715 - -
Bhi10g01443 828 SUPERFAMILY Periplasmic binding protein-like I 2 366 IPR028082 -
Bhi10g01443 828 PIRSF IGluLR_plant 1 826 IPR017103 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01441 Bhi-Chr10:34454116 Bhi10g01443 Bhi-Chr10:34455563 0 dispersed
Bhi10g01442 Bhi-Chr10:34454116 Bhi10g01443 Bhi-Chr10:34455563 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01443 K05387 - csv:101215485 1542.32