Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01451 TTTAGTGACTAGACTGTGCTTAAAACGTCCCCTTTATCTATTGTTAAACGGCAGCTCGAAGCCTTCAAATGCATCGCGAGAAGCCAAGAGGAGAATTTAAAATTGCAGAAGAATAGCGAAGAGAGTTCATAAAATAATCCAAAAGGACTCATTCGTTAGTGATGCCAAAGGTGAGGCTTCTAGAGAAATTGATCTCGAGAAGGGAACTCGAGTTCTGCGAATCAATTCTGACATGGGAATGGAGGTTTTCAATAAGCAGATACAAGAGGTTGAGGTTCAAGTAGATAAGCTCTCTGGGCTTCTTATTAAACTGAAGGATGCTAATGAGGAATCGAAGGCTGCTACCAAAGCATCAGAGATGAAAGCTATCAAGAAGCGTATGGAAAAGGATATCGATGAAGTGGGGAAAATAGCACGCAATGTCAAGGGGAAGTTGGAGGCTGTAAATAAAGATAACTTGACCAATAGGAAGAAGCCTGGGTGTGAGAAGGGAACGGCCATTGACAGAGCAAGAATGAACGTGACAAATGCGTTGACAAAAAAGTTCAAGGATCTAATGATAGAATTTCAGACCCTTCGTCAAAAAATTCAAGATGAGTACCGTGAAGTCGTGGAAAGACGAGTGATTACAGTTACGGGTACCAGACCAGATGAGTCGACGATTGATCACCTTATAGAAACTGGAAATAGTGAGCAAATATTCCAGAATGCATTTGAACAGATGGGACGAGGACAGGTTATCAGTACCGTGGAAGAAATTCAAGAGCGACATGATGCAGTTAAAGAAATTGAAAAAAGGCTCTTCGAATTGCATCAGATTTACCTTGACATGGCAGTTTTAGTGGAAGCCCAGAGTGAAATTTTGGATAACATAGAAAATCAGGTAACGAATGCAGTCGACCACGTTCGAACGGGAACCGATGCCCTCCAAACTGCGAAGAGCTTACAGAGGAGATCAAGAAAATGCATGATGATTGGCATCATATTGCTTCTGGTTATAGCAATCATAATCATCCTCTCAGTGCTGAAGCCATGGAAGAAGTAAACTGATGGAAATGATACCAAAATGTGGACTCAGTTTTCACAGTTTCCATTGCTCACAATGTCCTTTCGTTGTAGAATCGTCGCTCCTTCAAATTACAAATTTTATTTTGTTT 1157 40.97 MGMEVFNKQIQEVEVQVDKLSGLLIKLKDANEESKAATKASEMKAIKKRMEKDIDEVGKIARNVKGKLEAVNKDNLTNRKKPGCEKGTAIDRARMNVTNALTKKFKDLMIEFQTLRQKIQDEYREVVERRVITVTGTRPDESTIDHLIETGNSEQIFQNAFEQMGRGQVISTVEEIQERHDAVKEIEKRLFELHQIYLDMAVLVEAQSEILDNIENQVTNAVDHVRTGTDALQTAKSLQRRSRKCMMIGIILLLVIAIIIILSVLKPWKK 270
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 34753397 34757126 + XM_039046080.1 Bhi10g01451 47792
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01451 270 SMART SynN_4 1 124 IPR006011 GO:0016020
Bhi10g01451 270 SUPERFAMILY t-snare proteins 2 228 IPR010989 GO:0016020|GO:0016192
Bhi10g01451 270 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 1 264 - -
Bhi10g01451 270 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Bhi10g01451 270 Gene3D - 164 266 - -
Bhi10g01451 270 PANTHER SYNTAXIN 1 264 IPR045242 -
Bhi10g01451 270 CDD SNARE_syntaxin1-like 172 234 - -
Bhi10g01451 270 Pfam SNARE domain 209 261 IPR000727 -
Bhi10g01451 270 CDD SynN 3 160 IPR006011 GO:0016020
Bhi10g01451 270 SMART tSNARE_6 168 235 IPR000727 -
Bhi10g01451 270 Coils Coil 10 30 - -
Bhi10g01451 270 Pfam Syntaxin 6 207 IPR006011 GO:0016020
Bhi10g01451 270 Gene3D - 2 127 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01451 Bhi-Chr10:34753397 Bhi10g01454 Bhi-Chr10:34761476 9.11E-105 dispersed
Bhi10g01451 Bhi-Chr10:34753397 Bhi10g01452 Bhi-Chr10:34753599 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01451 K08486 - csv:101214355 469.159