Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi10g01451 | TTTAGTGACTAGACTGTGCTTAAAACGTCCCCTTTATCTATTGTTAAACGGCAGCTCGAAGCCTTCAAATGCATCGCGAGAAGCCAAGAGGAGAATTTAAAATTGCAGAAGAATAGCGAAGAGAGTTCATAAAATAATCCAAAAGGACTCATTCGTTAGTGATGCCAAAGGTGAGGCTTCTAGAGAAATTGATCTCGAGAAGGGAACTCGAGTTCTGCGAATCAATTCTGACATGGGAATGGAGGTTTTCAATAAGCAGATACAAGAGGTTGAGGTTCAAGTAGATAAGCTCTCTGGGCTTCTTATTAAACTGAAGGATGCTAATGAGGAATCGAAGGCTGCTACCAAAGCATCAGAGATGAAAGCTATCAAGAAGCGTATGGAAAAGGATATCGATGAAGTGGGGAAAATAGCACGCAATGTCAAGGGGAAGTTGGAGGCTGTAAATAAAGATAACTTGACCAATAGGAAGAAGCCTGGGTGTGAGAAGGGAACGGCCATTGACAGAGCAAGAATGAACGTGACAAATGCGTTGACAAAAAAGTTCAAGGATCTAATGATAGAATTTCAGACCCTTCGTCAAAAAATTCAAGATGAGTACCGTGAAGTCGTGGAAAGACGAGTGATTACAGTTACGGGTACCAGACCAGATGAGTCGACGATTGATCACCTTATAGAAACTGGAAATAGTGAGCAAATATTCCAGAATGCATTTGAACAGATGGGACGAGGACAGGTTATCAGTACCGTGGAAGAAATTCAAGAGCGACATGATGCAGTTAAAGAAATTGAAAAAAGGCTCTTCGAATTGCATCAGATTTACCTTGACATGGCAGTTTTAGTGGAAGCCCAGAGTGAAATTTTGGATAACATAGAAAATCAGGTAACGAATGCAGTCGACCACGTTCGAACGGGAACCGATGCCCTCCAAACTGCGAAGAGCTTACAGAGGAGATCAAGAAAATGCATGATGATTGGCATCATATTGCTTCTGGTTATAGCAATCATAATCATCCTCTCAGTGCTGAAGCCATGGAAGAAGTAAACTGATGGAAATGATACCAAAATGTGGACTCAGTTTTCACAGTTTCCATTGCTCACAATGTCCTTTCGTTGTAGAATCGTCGCTCCTTCAAATTACAAATTTTATTTTGTTT | 1157 | 40.97 | MGMEVFNKQIQEVEVQVDKLSGLLIKLKDANEESKAATKASEMKAIKKRMEKDIDEVGKIARNVKGKLEAVNKDNLTNRKKPGCEKGTAIDRARMNVTNALTKKFKDLMIEFQTLRQKIQDEYREVVERRVITVTGTRPDESTIDHLIETGNSEQIFQNAFEQMGRGQVISTVEEIQERHDAVKEIEKRLFELHQIYLDMAVLVEAQSEILDNIENQVTNAVDHVRTGTDALQTAKSLQRRSRKCMMIGIILLLVIAIIIILSVLKPWKK | 270 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 34753397 | 34757126 | + | XM_039046080.1 | Bhi10g01451 | 47792 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi10g01451 | 270 | SMART | SynN_4 | 1 | 124 | IPR006011 | GO:0016020 | |
| Bhi10g01451 | 270 | SUPERFAMILY | t-snare proteins | 2 | 228 | IPR010989 | GO:0016020|GO:0016192 | |
| Bhi10g01451 | 270 | PANTHER | SYNTAXIN OF PLANTS 122 PROTEIN | 1 | 264 | - | - | |
| Bhi10g01451 | 270 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 173 | 235 | IPR000727 | - | |
| Bhi10g01451 | 270 | Gene3D | - | 164 | 266 | - | - | |
| Bhi10g01451 | 270 | PANTHER | SYNTAXIN | 1 | 264 | IPR045242 | - | |
| Bhi10g01451 | 270 | CDD | SNARE_syntaxin1-like | 172 | 234 | - | - | |
| Bhi10g01451 | 270 | Pfam | SNARE domain | 209 | 261 | IPR000727 | - | |
| Bhi10g01451 | 270 | CDD | SynN | 3 | 160 | IPR006011 | GO:0016020 | |
| Bhi10g01451 | 270 | SMART | tSNARE_6 | 168 | 235 | IPR000727 | - | |
| Bhi10g01451 | 270 | Coils | Coil | 10 | 30 | - | - | |
| Bhi10g01451 | 270 | Pfam | Syntaxin | 6 | 207 | IPR006011 | GO:0016020 | |
| Bhi10g01451 | 270 | Gene3D | - | 2 | 127 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi10g01451 | Bhi-Chr10:34753397 | Bhi10g01454 | Bhi-Chr10:34761476 | 9.11E-105 | dispersed | |
| Bhi10g01451 | Bhi-Chr10:34753397 | Bhi10g01452 | Bhi-Chr10:34753599 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi10g01451 | K08486 | - | csv:101214355 | 469.159 |