Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi10g01452 | CTTTCTGCTGTGTCCGTTTCTTGTCAACTTTGGTTCTGCCTCTCTTTGCTACGGCCGGCCGGCCTGGTTTCCCCAACATAGTAGAAACGTAAAACGCTATAAATTTTATAACCCAAAACCCATTCTTCCTCGATTTGACTGCCCTTTTCTTTTGTTTCTTCTTTCGTCTTTGTTTTTGTATTCTTTACTATACTTTTCCTTCTTTGTTTCCTACTCTTTTTCTTTTGTGGGTCTGTGATTTTGACCGAGATGAACGATTTGCTCACGGACTCATTCGTTAGTGATGCCAAAGGTGAGGCTTCTAGAGAAATTGATCTCGAGAAGGGAACTCGAGTTCTGCGAATCAATTCTGACATGGGAATGGAGGTTTTCAATAAGCAGATACAAGAGGTTGAGGTTCAAGTAGATAAGCTCTCTGGGCTTCTTATTAAACTGAAGGATGCTAATGAGGAATCGAAGGCTGCTACCAAAGCATCAGAGATGAAAGCTATCAAGAAGCGTATGGAAAAGGATATCGATGAAGTGGGGAAAATAGCACGCAATGTCAAGGGGAAGTTGGAGGCTGTAAATAAAGATAACTTGACCAATAGGAAGAAGCCTGGGTGTGAGAAGGGAACGGCCATTGACAGAGCAAGAATGAACGTGACAAATGCGTTGACAAAAAAGTTCAAGGATCTAATGATAGAATTTCAGACCCTTCGTCAAAAAATTCAAGATGAGTACCGTGAAGTCGTGGAAAGACGAGTGATTACAGTTACGGGTACCAGACCAGATGAGTCGACGATTGATCACCTTATAGAAACTGGAAATAGTGAGCAAATATTCCAGAATGCATTTGAACAGATGGGACGAGGACAGGTTATCAGTACCGTGGAAGAAATTCAAGAGCGACATGATGCAGTTAAAGAAATTGAAAAAAGGCTCTTCGAATTGCATCAGATTTACCTTGACATGGCAGTTTTAGTGGAAGCCCAGAGTGAAATTTTGGATAACATAGAAAATCAGGTAACGAATGCAGTCGACCACGTTCGAACGGGAACCGATGCCCTCCAAACTGCGAAGAGCTTACAGAGGAGATCAAGAAAATGCATGATGATTGGCATCATATTGCTTCTGGTTATAGCAATCATAATCATCCTCTCAGTGCTGAAGCCATGGAAGAAGTAAACTGATGGAAATGATACCAAAATGTGGACTCAGTTTTCACAGTTTCCATTGCTCACAATGTCCTTTCGTTGTAGAATCGTCGCTCCTTCAAATTACAAATTTTATTTTGTTT | 1279 | 41.13 | MNDLLTDSFVSDAKGEASREIDLEKGTRVLRINSDMGMEVFNKQIQEVEVQVDKLSGLLIKLKDANEESKAATKASEMKAIKKRMEKDIDEVGKIARNVKGKLEAVNKDNLTNRKKPGCEKGTAIDRARMNVTNALTKKFKDLMIEFQTLRQKIQDEYREVVERRVITVTGTRPDESTIDHLIETGNSEQIFQNAFEQMGRGQVISTVEEIQERHDAVKEIEKRLFELHQIYLDMAVLVEAQSEILDNIENQVTNAVDHVRTGTDALQTAKSLQRRSRKCMMIGIILLLVIAIIIILSVLKPWKK | 305 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 34753599 | 34757126 | + | XM_039046078.1 | Bhi10g01452 | 47793 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi10g01452 | 305 | SMART | SynN_4 | 33 | 159 | IPR006011 | GO:0016020 | |
| Bhi10g01452 | 305 | Coils | Coil | 45 | 65 | - | - | |
| Bhi10g01452 | 305 | CDD | SynN | 38 | 195 | IPR006011 | GO:0016020 | |
| Bhi10g01452 | 305 | SUPERFAMILY | t-snare proteins | 35 | 263 | IPR010989 | GO:0016020|GO:0016192 | |
| Bhi10g01452 | 305 | SMART | tSNARE_6 | 203 | 270 | IPR000727 | - | |
| Bhi10g01452 | 305 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 208 | 270 | IPR000727 | - | |
| Bhi10g01452 | 305 | PANTHER | SYNTAXIN OF PLANTS 122 PROTEIN | 4 | 299 | - | - | |
| Bhi10g01452 | 305 | Pfam | SNARE domain | 244 | 296 | IPR000727 | - | |
| Bhi10g01452 | 305 | Gene3D | - | 32 | 162 | - | - | |
| Bhi10g01452 | 305 | PANTHER | SYNTAXIN | 4 | 299 | IPR045242 | - | |
| Bhi10g01452 | 305 | CDD | SNARE_syntaxin1-like | 207 | 269 | - | - | |
| Bhi10g01452 | 305 | Gene3D | - | 199 | 301 | - | - | |
| Bhi10g01452 | 305 | Pfam | Syntaxin | 41 | 242 | IPR006011 | GO:0016020 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi10g01452 | Bhi-Chr10:34753599 | Bhi10g01455 | Bhi-Chr10:34761482 | 3.24E-121 | dispersed | |
| Bhi11g02367 | Bhi-Chr11:64444391 | Bhi10g01452 | Bhi-Chr10:34753599 | 9.31E-71 | dispersed | |
| Bhi10g01451 | Bhi-Chr10:34753397 | Bhi10g01452 | Bhi-Chr10:34753599 | 0 | tandem | |
| Bhi10g01452 | Bhi-Chr10:34753599 | Bhi10g01453 | Bhi-Chr10:34761204 | 7.45E-104 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi10g01452 | K08486 | - | csv:101214355 | 526.168 |