Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01477 ATGGATTACTCTCCACCGAACTGGAATTGGCTCTTCGATTACTCTACAATGGATGATCTCGCCATCGTCGACCCCCGTTTCTCGCCGCCGCAGTCCATCAGTTTCTCCTGGTCCAATCCCTCCATCAACTTTTCATCTACACACAGCCTTGAGGTAGATTGCTCGTATGAAGATCTGGACAGCTTAAAGGAAGTGGGTCGGAAACGGCTAAGGGGTGAAACAGGTGCTGCGTCTACCTCCAAAGCCTGCAGGGAGAAACAGAGGAGAGATAAGCTGAATGAGAGGTTCTTGGAATTGGCTGCTGTCCTGGAACCTGGGAAACCACCCAAAACCGACAAAGTTGCAATCTTGAGTGATGCTATCAGAATGATGACTGATTTACAATGTGAAACTCAGAAGCTGAGAGAATCAAAGGAGGATTTGAAGGCAAAAATCAAAGAACTAAAGGTTGAGAAAAATGAACTTCGTGATGAAAAGCAAAGGTTGAGAGCAGAGAAAGAAAAGTTGGAGATGCAAATCAAAGCAGTGAATACTCGAGCAGCTGACATCCAGCATCCTCCCCCTACACTGTCAACTGCATTTACAGCACAAGGGCAAGCGGCTGGTAACAAGTTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAGTTTTTGCCACCTGCAGCTGTCGACATATCACAGGATCACGTGCTCCGCCCACCAGTTGCTTAAAGGGGAGAACAAATGATTTGGTTCGTTTATTGTGCTGTTATAATTAACAATGGCTTTATATGTTTGTGTTTCTTTTCAACCATGTGTTTTGTTTTCAATTGTTCAAAGAAGCTCCTGGTGGTGTAAAAACTTCTTTTCAAGACTAGCAAATGTTGCATTGCTAACTCTATATAAAATAAAAGGAAGTATTTTACTGAATTTAA 920 43.48 MDYSPPNWNWLFDYSTMDDLAIVDPRFSPPQSISFSWSNPSINFSSTHSLEVDCSYEDLDSLKEVGRKRLRGETGAASTSKACREKQRRDKLNERFLELAAVLEPGKPPKTDKVAILSDAIRMMTDLQCETQKLRESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLEMQIKAVNTRAADIQHPPPTLSTAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35296201 35299425 - XM_039044944.1 Bhi10g01477 47818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01477 238 SMART finulus 82 133 IPR011598 GO:0046983
Bhi10g01477 238 Pfam Helix-loop-helix DNA-binding domain 79 128 IPR011598 GO:0046983
Bhi10g01477 238 Gene3D - 71 125 IPR036638 GO:0046983
Bhi10g01477 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 127 IPR011598 GO:0046983
Bhi10g01477 238 PANTHER BHLH TRANSCRIPTION FACTOR 4 238 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bhi10g01477 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 152 IPR036638 GO:0046983
Bhi10g01477 238 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 4 238 - -
Bhi10g01477 238 CDD bHLH_AtILR3_like 81 156 - -
Bhi10g01477 238 Gene3D arf6 gtpase in complex with a specific effector, jip4 126 180 - -
Bhi10g01477 238 Coils Coil 124 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01477 Bhi-Chr10:35296201 Bhi11g00654 Bhi-Chr11:15317417 1.16E-93 dispersed
Bhi10g01477 Bhi-Chr10:35296201 Bhi05g00500 Bhi-Chr5:11051778 9.38E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2212 PF00010 HLH 3.10E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01477 - - csv:101212433 454.136