Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01688 TATGAAAATAAGGCTGAAGTTTTGCCACCAAAACCAACCAACATCCATTCCATGGGTTCTGCAACTGCAAGAGTACTGTTTCCCCATCTTCTCTTTCCCTCTTCTTCCTCTCACAATCCTCCACCAAACCCTAACACCAAATCTCCAAAACCCTTCACATTTTTCAACCATAATCCATTACCGACTAGGCGTTTGTTGCTCTTCTCCCTCCCCATAGCCACTGCCTTTCTTCTCCCTATTGGGAGCAATTCGAATCGACCCAGTTCTTGCTATGCTGTGGAGAGTTTTGACCCTGTAAGCCGTTCTGAGAGAGAAGCGAGTGCCGCCATTTCCCGAAGAGTATCTGAAGCTGTGGAGCTTCTTGATAAAGGCAGGGAGTTGCAAGCTCTTGGTGATTTCAATCAAGCTCTTCTCTACTTCACTAAGGTAATTGATAAATATAAAGATTTTGCATTCTCGGACTATGCCCGAGTAGGCAGAGCATTGGCCCTGTACGAAATTGGTGACCGAGAAGAAGCAATAGCAGAGATGGAGGATGTTTCCATATCATTGAAGGGATACCCAGAAGTGCATGCGGCATTGGCTGCAGCTTTATACGTGGATAAGCATGCTGCATTGCTGGCTGAAAATCAATTCACCATTGCAACTTTGCTTGATCCTCATTATGTGGATATCTCGAGAAGTCCCATCAGAAGTACCTGCCAGTAATTGCAACAAATGGAGAAAGATGCTGAGGGTTCAGAATTCTGATGTGCTTTCATTCAAGCTAAATGCCATTGCTGACAGGCAAGCAGGGAAGTGCTTCCAGCAAATTGAGTGGGCCATCAAGCATGTGCTTTGCCCTTGCCTTTCTAAATCACATGCTTTCAATTCTAAAGCTCCTATTGGACATAGGAGTCTTGATTCACACATCATCAATGGCTGTGATTGTGCCTCAGGTTCACTTAATCTAATCTCTGCTTTATTTATTTTCTTGTATGTAATCAAATCATACCAAATTTTGGAT 1006 43.64 MGSATARVLFPHLLFPSSSSHNPPPNPNTKSPKPFTFFNHNPLPTRRLLLFSLPIATAFLLPIGSNSNRPSSCYAVESFDPVSRSEREASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTKVIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKHAALLAENQFTIATLLDPHYVDISRSPIRSTCQ 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42610024 42615770 + XM_039045506.1 Bhi10g01688 48029

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01688 218 Gene3D Tetratricopeptide repeat domain 89 213 IPR011990 GO:0005515
Bhi10g01688 218 SUPERFAMILY TPR-like 92 207 IPR011990 GO:0005515
Bhi10g01688 218 Pfam Tetratricopeptide repeat 112 179 - -
Bhi10g01688 218 PANTHER EXPRESSED PROTEIN 1 209 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01688 - - - bhj:120088306 357.451
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01688 Bhi-Chr10:42610024 Bhi10g01690 Bhi-Chr10:42610025 7.75E-153 dispersed
Bhi10g01687 Bhi-Chr10:42610024 Bhi10g01688 Bhi-Chr10:42610024 4.29E-157 tandem
Bhi10g01688 Bhi-Chr10:42610024 Bhi10g01689 Bhi-Chr10:42610024 4.29E-158 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1311 . Blo16g00546 . . . Bpe13g00043 Bma09g00221 . . Cmo20g01066 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01387 . . . . . . . . . Cma20g01058 . . . Cpe16g00087 Bhi10g01688 . . . . . . Cla02g00047 Cam02g0049 Cec02g0049 Cco02g0042 Clacu02g0048 Cmu02g0048 Cre02g0387 Lsi10g00742 . . Cme11g00048
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008220 1 4 1 2 1 1 2 1 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 0 1 1 1 0 1 1 35