Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01728 ACTCAAATTTGCATTATATCAATAATAATAATCATAATAGAAAAATTAAGGGTTCCAAAGAACAATTGAGGATTCAAACTTCGGCGGTTGCATTGCAAACTGCAATCGCAAGGGACTTCTTCGAGTCTTCAAGGTTTATCCTCTGCTAATCATGGCGACCAGGCTTATGTTTGAGAATTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACCTTTGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGCATCTATTGATGGCACTCGCATTATTGGTCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCACACACCACTACTGACCAAGAACTCCAGCACTTGAGGAATAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTTATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAATGTTCTGGTGGGAAGCTACTGTAGCTTCACAAATAGGGGTGGCTTGGTTCATCCACACACATCTGTTGAAGATTTGGACGAGCTGTCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCGGATACCACTGCCACTGAGTTATCAGTCATCGAGAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGTTAATAGACAGTTATGTGTGAGGAGTCTCTTCTACTACACCTAAGATCTTGAAAGCAATTAATTGTCATTACTCTTGTGTTCTTTTCCTTCTATTATATTTAACAACTTGGTGAGTATGAAATTCGACCAAGCAATTAGTGTTTTGGTTAAAATTTATACCCGTATTTGCTATTATAAATCTGTTCTATATTTGTAATGATCAAACAAAATATTAAGGCTACCTACTACTCGAGTAACCGAAAGGCGAGGAACAGGAAATATTATTCATAAGAAAATGTTGAATTACATTGTC 1161 39.97 MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43290503 43293499 - XM_039044394.1 Bhi10g01728 48069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01728 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Bhi10g01728 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
Bhi10g01728 245 Gene3D - 1 225 - -
Bhi10g01728 245 SUPERFAMILY Pentein 1 224 - -
Bhi10g01728 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Bhi10g01728 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Bhi10g01728 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Bhi10g01728 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Bhi10g01728 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
Bhi10g01728 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02095 Bhi-Chr2:56804674 Bhi10g01728 Bhi-Chr10:43290503 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01728 K03264 - csv:101207707 462.611