Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01772 ATTCTTGCAAAATAATTTGCTTTTCTTGCACTCACCTCTCTCATGGCCCAGGTTTCTCAGCTACCTTGCGACGGCGATGGCATTTGCATGCTTTGCCGGGCTAACCCTTCCGATATGGAGACCATCACTTGCAAAACTTGCGTCACTCCTTGGCATGTCGATTGTCTCTCAAATCCCCCTGAAACCCTAGCTTCTACTCTTCAATGGGACTGTCCCGACTGTTCACCGGCTCCTGAAGATACTTCCCTTCCTCCGCCGTACAATTCTCCACTCCCAACTCTGCCTTCTAATGACCTCATTGCTGCGATTCGAGCCATTGAGGCCGATTCTTCCCTTACTGACGGCGAGAAGGCAAAAAAACGCCAGGAGCTGCTTACTGGAAAGTCACGGTCCGACGAGAATGATCTTAAGAGAAAAGAGGGAGATGATATTTTGGATTTGTTTGATGAGAGATTGAACTGTTCTTTCTGTATTCAGTTACCTGATAGGCCAGTCACTACTCCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACTAGGAAAGAACACTTGTGCAAAGTGCCGCTGCGTGATTCCCACTAAAATGGCTAGCCAGCCCCGCATTAATTCAACCCTTGTAGTGGCCATTCGTATGGCTAAATTGTCGAAATCATTTGTTTCCGGAGGACCTCAGAAGGCTTATCATTATGTCCACAATCAAAATAGACCAGATAAAGCCTATACCACTGACCGGGCACAAAAAAAAGGGAAAGCTAATGCAGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCCTGCTGAAAATGATCCTGAGAGAAACCAGGGTGTTCTGGTTGGTGAATGCTGGGAGGATAGGCTAGAATGTCGCCAATGGGGTGCTCACTTCCCACATATTGCAGGTATAGCGGGACAGTCAAATATTGGTGCCCAATCAGTGGTTCTTTCTGGTGGCTACCAGGATGATGAAGATCATGGGGAGTGGTTCCTCTACACTGGAAGTGGGGGTCGAGACCTTAGTGGGAACAAACGTACAAGCAAGGATCAGTCTTTTGACCAGAAATTTGAAAAATATAACAAAGCGCTGCAAGTTAGTTGCTTGAAAGGTTATCCTGTTCGGGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAGAAGGGACTGCGTTATGATGGAATTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGGCTTTAAGGTATGTCGGTATTTATTTGTTAGATGCGACAATGATCCTGCTCCATGGACAAGCGATGAACATGGAGATCACCCTAGACCCTTACCATCAATTTCAGAGCTGAAAAAAGCAACAAATATTACGGAGAGGAAGGAAGGTCCATCATGGGACTTTGATGAGAAAGATAACCGATGGAAGTGGAGCAGACCTCCCCCAACGAGCACAAAACCAGTTGAAACCGAAGATTCTGCTTCTGGGAAGAGGTCAAGGAGAAAAATTAGGCAATCACACAACATGAATGTTCGAGAAAGGTTACTGAAAGGTTGGCTAATTATATCGAGTAAAGTCGCTAAAAAAGGATGGTTTGGTGGTGAACACGAGTTTAGCTGCCTTATTTGTGGAGAGGTGATGAGTCTGCCAATTACTACGCCTTGTGCCCATAACTTCTGCAAGTCATGCTTGGAAGGTGCTTTTGTGGGCAAGACATTCTTGAGAGAGAGAAGCAGTGGTGGACGGAGTCTTAGATCTCGAAAGAATGTCATGACTTGTCCTTGTTGTCCGACAGATATATCCGATTTTCTACAGAATCTTCAGGTGAATAGAGATTTGTTGGATGTGATTGAGTCGTTGAAAGGTAAGCTTGAAGAAGAAGGGGATGAATCTGAGAAGCTTTGTGAAGAAGAGATAGATAGGGAAGAGGAGAATGAGGGAAAAGATGAAGTGGAAAAAAGAAAGCAAGCAAAGGTGGTGGTTGATGATGGGGAGGAAAAACCTGTCATTTGATTCGAAGACGATATCAAATGCCATGTGGTTTACTTCTTTGAGAACTGACCTCGCTAGACGAATAGATACGTCTTTGTCATATTTTCTTTAAGAGAAGTTGTGTAAATAGGCAAGTTGTAGTTGTAATAGACAATGATGACATCATAGGTGGGTTAGAATGTAGTTGTTTGTAGTACAAAGCCATGGCAATTGAATGATGGGTAGGTTGGAATGTAAATTCCATTCCCATTCCAACTGATTGATTTCTTCTCTAAATTCTCTTAGGTTCTAATTGTTGAACTTTAGAAAAGTGTCTATTTAGTCTCTGGTTAATTTGTCGTTA 2350 43.28 MAQVSQLPCDGDGICMLCRANPSDMETITCKTCVTPWHVDCLSNPPETLASTLQWDCPDCSPAPEDTSLPPPYNSPLPTLPSNDLIAAIRAIEADSSLTDGEKAKKRQELLTGKSRSDENDLKRKEGDDILDLFDERLNCSFCIQLPDRPVTTPCGHNFCLKCFQKWIGLGKNTCAKCRCVIPTKMASQPRINSTLVVAIRMAKLSKSFVSGGPQKAYHYVHNQNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHIAGIAGQSNIGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKYNKALQVSCLKGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPWTSDEHGDHPRPLPSISELKKATNITERKEGPSWDFDEKDNRWKWSRPPPTSTKPVETEDSASGKRSRRKIRQSHNMNVRERLLKGWLIISSKVAKKGWFGGEHEFSCLICGEVMSLPITTPCAHNFCKSCLEGAFVGKTFLRERSSGGRSLRSRKNVMTCPCCPTDISDFLQNLQVNRDLLDVIESLKGKLEEEGDESEKLCEEEIDREEENEGKDEVEKRKQAKVVVDDGEEKPVI 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44650957 44658551 + XM_039045646.1 Bhi10g01772 48113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01772 661 ProSiteProfiles Zinc finger PHD-type profile. 12 63 IPR019787 -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 445 468 - -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 617 661 - -
Bhi10g01772 661 ProSitePatterns Zinc finger PHD-type signature. 15 60 IPR019786 -
Bhi10g01772 661 SMART PHD_3 14 61 IPR001965 -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 424 496 - -
Bhi10g01772 661 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 70 IPR013083 -
Bhi10g01772 661 Pfam SAD/SRA domain 271 419 IPR003105 -
Bhi10g01772 661 ProSiteProfiles YDG domain profile. 268 416 IPR003105 -
Bhi10g01772 661 SMART G9a_1 263 420 IPR003105 -
Bhi10g01772 661 Coils Coil 601 628 - -
Bhi10g01772 661 Pfam RING-type zinc-finger 531 585 IPR027370 -
Bhi10g01772 661 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 646 - -
Bhi10g01772 661 SUPERFAMILY RING/U-box 131 186 - -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 424 438 - -
Bhi10g01772 661 SUPERFAMILY RING/U-box 527 612 - -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 621 636 - -
Bhi10g01772 661 SUPERFAMILY FYVE/PHD zinc finger 7 67 IPR011011 -
Bhi10g01772 661 SMART ring_2 140 178 IPR001841 -
Bhi10g01772 661 SMART ring_2 531 587 IPR001841 -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 637 661 - -
Bhi10g01772 661 Pfam Zinc finger, C3HC4 type (RING finger) 140 178 IPR018957 GO:0046872
Bhi10g01772 661 ProSiteProfiles Zinc finger RING-type profile. 531 587 IPR001841 -
Bhi10g01772 661 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 646 IPR045134 -
Bhi10g01772 661 MobiDBLite consensus disorder prediction 100 122 - -
Bhi10g01772 661 Gene3D - 239 434 IPR036987 -
Bhi10g01772 661 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 207 IPR013083 -
Bhi10g01772 661 SUPERFAMILY PUA domain-like 242 438 IPR015947 -
Bhi10g01772 661 CDD RING-HC 140 178 - -
Bhi10g01772 661 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 523 637 IPR013083 -
Bhi10g01772 661 ProSitePatterns Zinc finger RING-type signature. 546 555 IPR017907 -
Bhi10g01772 661 ProSiteProfiles Zinc finger RING-type profile. 140 179 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01772 Bhi-Chr10:44650957 Bhi01g00663 Bhi-Chr1:12090666 6.12E-21 dispersed
Bhi10g01771 Bhi-Chr10:44650956 Bhi10g01772 Bhi-Chr10:44650957 0 tandem
Bhi10g01772 Bhi-Chr10:44650957 Bhi10g01773 Bhi-Chr10:44650958 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01772 K10638 - csv:101220457 1164.44