Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01773 TTCTTGCAAAATAATTTGCTTTTCTTGCACTCACCTCTCTCATGGCCCAGGTTTCTCAGCTACCTTGCGACGGCGATGGCATTTGCATGCTTTGCCGGGCTAACCCTTCCGATATGGAGACCATCACTTGCAAAACTTGCGTCACTCCTTGGCATGTCGATTGTCTCTCAAATCCCCCTGAAACCCTAGCTTCTACTCTTCAATGGGACTGTCCCGACTGTTCACCGGCTCCTGAAGATACTTCCCTTCCTCCGCCGTACAATTCTCCACTCCCAACTCTGCCTTCTAATGACCTCATTGCTGCGATTCGAGCCATTGAGGCCGATTCTTCCCTTACTGACGGCGAGAAGGCAAAAAAACGCCAGGAGCTGCTTACTGGAAAGTCACGGTCCGACGAGAATGATCTTAAGAGAAAAGAGGGAGATGATATTTTGGATTTGTTTGATGAGAGATTGAACTGTTCTTTCTGTATTCAGTTACCTGATAGGCCAGTCACTACTCCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACTAGGAAAGAACACTTGTGCAAAGTGCCGCTGCGTGATTCCCACTAAAATGGCTAGCCAGCCCCGCATTAATTCAACCCTTGTAGTGGCCATTCGTATGGCTAAATTGTCGAAATCATTTGTTTCCGGAGGACCTCAGAAGGCTTATCATTATGTCCACAATCAAAATAGACCAGATAAAGCCTATACCACTGACCGGGCACAAAAAAAAGGGAAAGCTAATGCAGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCCTGCTGAAAATGATCCTGAGAGAAACCAGGGTGTTCTGGTTGGTGAATGCTGGGAGGATAGGCTAGAATGTCGCCAATGGGGTGCTCACTTCCCACATATTGCAGGTATAGCGGGACAGTCAAATATTGGTGCCCAATCAGTGGTTCTTTCTGGTGGCTACCAGGATGATGAAGATCATGGGGAGTGGTTCCTCTACACTGGAAGTGGGGGTCGAGACCTTAGTGGGAACAAACGTACAAGCAAGGATCAGTCTTTTGACCAGAAATTTGAAAAATATAACAAAGCGCTGCAAGTTAGTTGCTTGAAAGGTTATCCTGTTCGGGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAGAAGGGACTGCGTTATGATGGAATTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGGCTTTAAGGTATGTCGGTATTTATTTGTTAGATGCGACAATGATCCTGCTCCATGGACAAGCGATGAACATGGAGATCACCCTAGACCCTTACCATCAATTTCAGAGCTGAAAAAAGCAACAAATATTACGGAGAGGAAGGAAGGTCCATCATGGGACTTTGATGAGAAAGATAACCGATGGAAGTGGAGCAGACCTCCCCCAACGAGCACAAAACCAGTTGAAACCGAAGATTCTGCTTCTGGGAAGAGGTCAAGGAGAAAAATTAGGCAATCACACAACATGAATGTTCGAGAAAGGTTACTGAAAGAGTTTAGCTGCCTTATTTGTGGAGAGGTGATGAGTCTGCCAATTACTACGCCTTGTGCCCATAACTTCTGCAAGTCATGCTTGGAAGGTGCTTTTGTGGGCAAGACATTCTTGAGAGAGAGAAGCAGTGGTGGACGGAGTCTTAGATCTCGAAAGAATGTCATGACTTGTCCTTGTTGTCCGACAGATATATCCGATTTTCTACAGAATCTTCAGGTGAATAGAGATTTGTTGGATGTGATTGAGTCGTTGAAAGGTAAGCTTGAAGAAGAAGGGGATGAATCTGAGAAGCTTTGTGAAGAAGAGATAGATAGGGAAGAGGAGAATGAGGGAAAAGATGAAGTGGAAAAAAGAAAGCAAGCAAAGGTGGTGGTTGATGATGGGGAGGAAAAACCTGTCATTTGATTCGAAGACGATATCAAATGCCATGTGGTTTACTTCTTTGAGAACTGACCTCGCTAGACGAATAGATACGTCTTTGTCATATTTTCTTTAAGAGAAGTTGTGTAAATAGGCAAGTTGTAGTTGTAATAGACAATGATGACATCATAGGTGGGTTAGAATGTAGTTGTTTGTAGTACAAAGCCATGGCAATTGAATGATGGGTAGGTTGGAATGTAAATTCCATTCCCATTCCAACTGATTGATTTCTTCTCTAAATTCTCTTAGGTTCTAATTGTTGAACTTTAGAAAAGTGTCTATTTAGTCTCTGGTTAATTTGTCGTTA 2292 43.37 MAQVSQLPCDGDGICMLCRANPSDMETITCKTCVTPWHVDCLSNPPETLASTLQWDCPDCSPAPEDTSLPPPYNSPLPTLPSNDLIAAIRAIEADSSLTDGEKAKKRQELLTGKSRSDENDLKRKEGDDILDLFDERLNCSFCIQLPDRPVTTPCGHNFCLKCFQKWIGLGKNTCAKCRCVIPTKMASQPRINSTLVVAIRMAKLSKSFVSGGPQKAYHYVHNQNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHIAGIAGQSNIGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKYNKALQVSCLKGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPWTSDEHGDHPRPLPSISELKKATNITERKEGPSWDFDEKDNRWKWSRPPPTSTKPVETEDSASGKRSRRKIRQSHNMNVRERLLKEFSCLICGEVMSLPITTPCAHNFCKSCLEGAFVGKTFLRERSSGGRSLRSRKNVMTCPCCPTDISDFLQNLQVNRDLLDVIESLKGKLEEEGDESEKLCEEEIDREEENEGKDEVEKRKQAKVVVDDGEEKPVI 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44650958 44658551 + XM_039045647.1 Bhi10g01773 48114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01773 642 Gene3D - 239 434 IPR036987 -
Bhi10g01773 642 ProSiteProfiles Zinc finger PHD-type profile. 12 63 IPR019787 -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 445 468 - -
Bhi10g01773 642 Pfam RING-type zinc-finger 512 566 IPR027370 -
Bhi10g01773 642 ProSitePatterns Zinc finger PHD-type signature. 15 60 IPR019786 -
Bhi10g01773 642 SMART PHD_3 14 61 IPR001965 -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 424 496 - -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 598 642 - -
Bhi10g01773 642 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 627 - -
Bhi10g01773 642 ProSiteProfiles YDG domain profile. 268 416 IPR003105 -
Bhi10g01773 642 ProSitePatterns Zinc finger RING-type signature. 527 536 IPR017907 -
Bhi10g01773 642 SMART G9a_1 263 420 IPR003105 -
Bhi10g01773 642 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 473 599 IPR013083 -
Bhi10g01773 642 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 207 IPR013083 -
Bhi10g01773 642 SUPERFAMILY RING/U-box 131 186 - -
Bhi10g01773 642 Coils Coil 582 609 - -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 424 438 - -
Bhi10g01773 642 SUPERFAMILY RING/U-box 505 593 - -
Bhi10g01773 642 SUPERFAMILY FYVE/PHD zinc finger 7 67 IPR011011 -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 602 617 - -
Bhi10g01773 642 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 70 IPR013083 -
Bhi10g01773 642 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 627 IPR045134 -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 618 642 - -
Bhi10g01773 642 Pfam SAD/SRA domain 271 419 IPR003105 -
Bhi10g01773 642 MobiDBLite consensus disorder prediction 100 122 - -
Bhi10g01773 642 SUPERFAMILY PUA domain-like 242 438 IPR015947 -
Bhi10g01773 642 CDD RING-HC 140 178 - -
Bhi10g01773 642 SMART ring_2 140 178 IPR001841 -
Bhi10g01773 642 SMART ring_2 512 568 IPR001841 -
Bhi10g01773 642 ProSiteProfiles Zinc finger RING-type profile. 512 568 IPR001841 -
Bhi10g01773 642 Pfam Zinc finger, C3HC4 type (RING finger) 140 178 IPR018957 GO:0046872
Bhi10g01773 642 ProSiteProfiles Zinc finger RING-type profile. 140 179 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00017 Bhi-Chr7:1151404 Bhi10g01773 Bhi-Chr10:44650958 0 dispersed
Bhi10g01771 Bhi-Chr10:44650956 Bhi10g01773 Bhi-Chr10:44650958 0 dispersed
Bhi10g01773 Bhi-Chr10:44650958 Bhi01g00663 Bhi-Chr1:12090666 4.04E-21 dispersed
Bhi10g01772 Bhi-Chr10:44650957 Bhi10g01773 Bhi-Chr10:44650958 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01773 K10638 - csv:101220457 1176.0