Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01798 ACCCAACACATACAATTTTATACGATACTGGGGGTGGGGGGGCAACCAAACCAGACGGGCATTGGGATTTGAGAGTGAGCAATCTCAAGCCAAATGCTTACGCCTGATATTCTTGACGGATTTGGCACAAGAAATCAAACACAAGGAAACGGAGAAAAGGAAAATCAAGCGTAAAGGAGAGAGAGAGAAGAGAACAGAGAAAGCAAAGGCAAAGCAGTGAATTGACTGACAACTGGCGAGTGGTTAGAGAGAGAGAGATGGGGGTCCCCTCCTTTCTCTCTTCTTTCTTCTGCAATTGGCAGCTCTCTTCTTCTTCTTCTTCTCTTTGCCGTTTCTACAACATTCACCAACACCCATCAAGATCTTTGCTCTGTTTTGTTCCTTTCTCTTCTTGGGTCTCTGTTTTTCGTTTCTGGGTATTGATTGTTCCTATGGAGAATTGAATTTACAGACTCAGATACTATGCGAGGGGTTGGAATTCTTTTGGGTTTTGATCTGGGTGGAAATGCGTTTTGTTTATTGTCTTTGGATTTTCAGTGAACTTCTTGATTGCTGTGCGTTTTAGCGATTGAGCATTGAGAAGAAGACGGGAGGGAAAATGTGGGATCTCAATGATTCTCCCGATCATGGTGGAACTGATGAATTTGAGGTTCTTTCATCGATTGATGGCGATGAAGACAGAGCAAAATGGATAGGATCCATTAATTCTAACTCGAGCTCTTCGGTGGTGGTTATGGAGGATGGATCCGACGCCGACGAAGCCAGCGTCGGCGAGGAAGAACCACTAGTCCAACGGAAAAACTTCTCGGTAACCCACCCGCTGGCGACTCGGCAGTTCTTCCCCATGGAGGATTCCGACGTCGGGGCTTCATCGGCGGCCGTCGGTGGCTCAGCTAGGTTCCCTCGAGCTCGGTGGGTCGGCGTGAAGTTTTGCCAGACAGAGCCTGTCGCTGCTGTGAGACCAATGGCGGTTCTGCAGCCGTTAAAGAAAAGTCGGCGAGGGCCCAGGTCCCGGAGTTCTCAATATCGCGGCGTCACGTTCTACCGGCGCACCGGCCGGTGGGAATCTCACATATGGGACTGTGGCAAACAAGTTTACCTGGGCGGATTTGATACTGCTCATGCAGCTGCTCGAGCCTACGACAGGGCAGCTATAAAATTTCGAGGAACAGAGGCAGACATAAATTTCAGTATTGAAGACTACGAGGATGATTTGCAGCAGATGGGAAATTTGACGAAGGAAGAATTCGTGCATGTTCTTCGTAGACAAAGCTCAGGTTATCCGAGAGGAAGCTCGAAATTTAGAGGTGTAACATTGCATAAATGTGGGAGATGGGAGGCTCGGATGGGCCAGTTTTTAGGCAAAAAGTACGTTTATCTGGGGTTGTTTGATTCCGAGATTGAAGCTGCAAGAGCTTATGATAAAGCTGCAATCAAGTATAATGGCAAAGAAGCTGTTACAAACTTTGATCCCAGCATATATGAGGATGAGCTGAGTACAACTGAATCATCATCAGGCAAAGTCTTGGAACAGAATCTTGATTTGAGGTTGGGCAATTCAAGCTCTAAAAAACACACACTTTCATTTGGAAATCATTGCTCAAATGTCACCCCAAATACTGATTTGCAAATTACTAATGAATCTAACCTTCAGGAATCAAGTATATTTGAGAATGATAATGGTAGAGAATATAGGTTCCTTCAGACAGAGAAAATGCAGTTTCGTAGTGAAATGATCGTTCGACCTCCACCCTCCATTGAAACGACAGAACATGGGCGCTTGGAGACTCTTCACAATTACTCTCCACACGTCAATCAATCAAACTCTCAAATTCAGTTGTTGAGCAGCAGCAATGAAGGAGGGTTAGGAAGTGATGAAGTTTCACTGTGTTTGAGTAAAGGCCACCAATGGCAGCAATCTGGTGGCTCTCAACAATTTGCAAATGCTGCAGCATCATCAGGATTCCCACAACTTCAAATTTCAACTTCCCAAAATTGGCTGCAGAAAAATAATGGATGTTACTTCTTACATAGACCCTCTTGATTCTATCTTTTTCAATGTTTTTCTGCATTGCCATTACCATTCAATCATTTTTCTTGTTTCTTCTTCGGTTTTTCGGTTTTTCAGTTTCTTTTTGGTTCATAAGTTCTTTCCTAAGCTTGTAAAGATTGATTCTTCCAAGAAACAATTGTTCTCTAAGAAGGAATAAGGGGCCATCTCATTCACATTTGGAAACAAAATATTCATCAATGTGATGTTGGATCATGAATGTATGTAACTCCAGTGATAGGAGTCTTTATATCAAACCTATAGTTAAACACATGAGTGAAAATTTGGA 2339 43.74 MWDLNDSPDHGGTDEFEVLSSIDGDEDRAKWIGSINSNSSSSVVVMEDGSDADEASVGEEEPLVQRKNFSVTHPLATRQFFPMEDSDVGASSAAVGGSARFPRARWVGVKFCQTEPVAAVRPMAVLQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGTEADINFSIEDYEDDLQQMGNLTKEEFVHVLRRQSSGYPRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGKEAVTNFDPSIYEDELSTTESSSGKVLEQNLDLRLGNSSSKKHTLSFGNHCSNVTPNTDLQITNESNLQESSIFENDNGREYRFLQTEKMQFRSEMIVRPPPSIETTEHGRLETLHNYSPHVNQSNSQIQLLSSSNEGGLGSDEVSLCLSKGHQWQQSGGSQQFANAAASSGFPQLQISTSQNWLQKNNGCYFLHRPS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44978620 44982875 - XM_039046097.1 Bhi10g01798 48139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01798 481 ProSiteProfiles AP2/ERF domain profile. 234 291 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 Gene3D AP2/ERF domain 233 292 IPR036955 GO:0003700|GO:0006355
Bhi10g01798 481 Gene3D AP2/ERF domain 141 200 IPR036955 GO:0003700|GO:0006355
Bhi10g01798 481 SUPERFAMILY DNA-binding domain 233 293 IPR016177 GO:0003677
Bhi10g01798 481 SMART rav1_2 142 204 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 SMART rav1_2 234 297 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 Pfam AP2 domain 142 190 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 Pfam AP2 domain 233 283 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 PRINTS Ethylene responsive element binding protein signature 235 246 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 PRINTS Ethylene responsive element binding protein signature 273 293 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 458 - -
Bhi10g01798 481 ProSiteProfiles AP2/ERF domain profile. 142 198 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 CDD AP2 233 293 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 MobiDBLite consensus disorder prediction 42 61 - -
Bhi10g01798 481 SUPERFAMILY DNA-binding domain 141 199 IPR016177 GO:0003677
Bhi10g01798 481 CDD AP2 142 197 IPR001471 GO:0003700|GO:0006355
Bhi10g01798 481 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TOE3 1 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00949 Bhi-Chr3:17856757 Bhi10g01798 Bhi-Chr10:44978620 8.23E-141 dispersed
Bhi03g00950 Bhi-Chr3:17856757 Bhi10g01798 Bhi-Chr10:44978620 6.11E-143 dispersed
Bhi10g00612 Bhi-Chr10:13385403 Bhi10g01798 Bhi-Chr10:44978620 1.40E-93 dispersed
Bhi10g01798 Bhi-Chr10:44978620 Bhi11g02150 Bhi-Chr11:60340119 8.96E-100 dispersed
Bhi10g01797 Bhi-Chr10:44978620 Bhi10g01798 Bhi-Chr10:44978620 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2232 PF00847 AP2 4.40E-10 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01798 K09284 - csv:101208665 813.913