Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01800 TATTGTTATAATTAAACCCAACAAAGAAACTTCCCTCAATATTTCATCAAAAAATTCTCTCCAAATTAAATTTCTTCCTCCACCATTGAAGAGAGAGAAGAAGAAACAGAGTTTGTTTCATTTCTCTGTTTCTTAAAATGAAAGAGAAAAATGAAGATCAGAAAAAATTAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTAGCGGAAATTCGAGAGCCTAATAAACGCTCTCGAATTTGGCTTGGTTCTTATTCTTCTCCCGTCGCCGCCGCCCGTGCCTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCTCTGCTCGCCTTAATTTTCCTGACTTTTTCTCCACCGTTGACCGCTCCTTCCCTCTCTCCGCTGCTGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCGTGTCGATGCTCTTGAGTCTTCTCTCCGCCACCACTCCGCCCATTCATCCGACCGAACCACGAAGCTTCGTTCTTCTTCTTCCAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCCGACCCGGAAGATTCCGATGGCGACTGCGCTACCACTCCTTGCACAAGCTGACAATTTCAAAATCGCTTTCTCCACCACCACGAATTGAGCTATAAACTGTCCCCCTTCGGGAGCTGGGGAATAGCCCCGTAGGGAACTTCTTGTTAATTGCACGCACTAAGTCTTTAAAAGCAAACATGAATCCCCGGAACGTAACTTCAAGCGTCGAAGCTAGAAGAAAGAGATGGATTCCCGGGCTTGATCTGGTTTAGTATTAAGTTGACCAAGGAGTGATAATTGCAGCAGGCGCAGACTCAGGTAGTTTGAATAGGGATTCTCCATCATTGTCGGAGGAAATTGCTTGTCTTCGCATGGGATCTCCCGAGAATCAAGAGATGATCGCCACGAAGAACATCCCAAAAATATTTACACTTTATAGCAAAAAAATTCTAAAAGTGTTTGTATTTTTGGAATTTTTTTTACAAAAGTGTAACTATTTTAAATGTTTTTTATATTTAAAAAGACCTCAATTAATTATATATTTTTTAAATTTTCAGAAATTGTTTATAACTTTATATAATTTTACGATAACTATGAAATTCTAGATTTGTCACTACTTAAGAGTACAGAAAAATGGGTGCAAGTGCTGTTCTAATTAGCTTACATGTAGATCAACTTTCTAACGTATATTTTAATTGATCAGAAAAATATTGGACAATAATTCACCATCAAATAAACATATGAATCATGGTTTAGCTCTCCCTTTCCTTGACCCTAGTTGTATGCATTATTGCACTAGTCTTTCCAAGACATTTCTTTTCATCAACTTGTTCTTTTTCTAACATCTTTTCCACGCATATTAAAGCATAGATATTTGGTGGGGAAGAAAAGTGTGTCTATATATATATGGGATAAAAGATTGAACCTCTAATTTCGAAATTGATTGTACGTACTTGATACCAATTGAACCAGTAC 1502 39.68 MKEKNEDQKKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPSARLNFPDFFSTVDRSFPLSAAAVRKIAAEVGARVDALESSLRHHSAHSSDRTTKLRSSSSSGFSDRVDLNKFPDPEDSDGDCATTPCTS 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45162561 45165333 - XM_039044933.1 Bhi10g01800 48141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01800 153 MobiDBLite consensus disorder prediction 107 153 - -
Bhi10g01800 153 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Bhi10g01800 153 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 5 143 - -
Bhi10g01800 153 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Bhi10g01800 153 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Bhi10g01800 153 SUPERFAMILY DNA-binding domain 13 71 IPR016177 GO:0003677
Bhi10g01800 153 MobiDBLite consensus disorder prediction 116 130 - -
Bhi10g01800 153 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Bhi10g01800 153 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 143 - -
Bhi10g01800 153 Gene3D AP2/ERF domain 12 71 IPR036955 GO:0003700|GO:0006355
Bhi10g01800 153 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Bhi10g01800 153 PRINTS Ethylene responsive element binding protein signature 52 72 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01800 Bhi-Chr10:45162561 Bhi04g01537 Bhi-Chr4:38427865 8.98E-27 dispersed
Bhi10g01799 Bhi-Chr10:45162547 Bhi10g01800 Bhi-Chr10:45162561 1.23E-111 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2234 PF00847 AP2 2.90E-11 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01800 K09286 - csv:101209150 217.624