Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01813 CTCTGTTGACGTGAACGCCTACTTGGGGGTATCCAGATCTTGCAGCTCTAAGAAGCTTCCCTTTCTCACTCCTCACTCTCTTTCTCTCTCTAGTTCTTCTTTTTTCTCTCAAACCACATTGAAGGATTGATACGAGACAGCGATGAATTTGGTGCAAGAAAACAAGATAACAGAGATTCAAACAAATTCGCCATGAAAGCTCATCGTTTGAGCTTCTTCATTTCGTTTCTATCTTTATTCGCTACATTCATCACAGCCAGAGGATTAACGTTTCTCCACGATTCCGGCATTCCCTACCGGAGAATTCTACATCAGCCGCTCTTTCCAATAGGCTCCGAGCCACCGGCGGACATTGACTTGTCTCCACCGCCTCCACCGCCGCCGGATTCTCCGTCGGATGATCAGCCGTTTTTCCATGAGCTGCCGACGAGTCCAGATCAGAGTCAACCATCTCCTTCCTCAAATACTAATGGAACTATGCCAATCCCCGCCTCTACGGCGCAACCGTCCAAGCCTACGAAGACTGTCGCGATTGCTATTTCGGTTGGGATTGTGACTTTGGGGATGCTTTCAGCTCTTGCTTTCTTTTTGTATCGTCACCGCGCGAAACATCCCGGGGAGTCGCAGAAGCTTGTTGGAGGGAATAATCCGGAGAGATTTGTGGAGGATTCGAGAGCGCCGCCTTCGAGTTTTTTCTATATTGGAACTGTTGAGCCGAGTCAGAGCTCTGTTGTGGAGCAGAATGGTGCTAATGGTGCTAATAGTTCGCCTTATAGGAAGCTGAATTCGATTAAGAGGTCGGATCGGTACCGTCCGAGTCCGGAGTTGCAGCCACTGCCACCTCTGCCTAAGCCGCCGGTGGCTATGTCGCCTCCGGCTTTGTCGTCTTCTGATGACGAAAGCCAGGATACGGCATTTCATACTCCGCAATGCTCGTCGATTGTCAGTCATGATGATGGCTATTTTTCACCGGCTTCTCGTCGGAGTAATTCGGTTAAAAGCTGTTCAACGGCCAGTTTTAAGAATGACCATATGAATTCCAATCCTCCTCCTCCCATTCCTCATTCCAAAAGAACCTCTCCTAAATCGAGATTTTCAGTTTCTTCGACGAAGCGCACCCGTCCTCAACCTCAGCCACCGCCGCCGCCTCCTCCTCCACCGCGTTCGTTTGATGATTTTCGTGAAACTCCGAATTCGAAAGAAACAATGCCTTTCTCTTCCACGAGACCTAAATTTTCAAAGCCGCCTCCTCCGCCGAATTTGGCCCTTCTTCAAACAATTAGCAATTCAGCCACATTTCCTCAAGTTCCGCAACCTGCTGCAGCTCCACCTCCGCCTCCCACCACCCCCACCGGTCCACCACCACGGCCACCGGCGCGTCCGGCCTCTTATACAACGCCTCAAAAACTAGGGTTATCGGAAACCAGAATGTCGGCAGTTACTCCTCCAGACTCCTCTAAGTCACAAATCTACTCAACAGCGAGATCAAACTCTTCTCCGAAATCAACACCGAGTTCTGCGACAACAAATTCTGCTAAAGACGTTGTCCCGAGGATTAATTCTATGGAGAAGCTCGAATCAGAAGATGCAGAAGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACCTCAGACCGAGCTACAGTTTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTTTTCGGCTTCAATTCTGCAAATTCCGTTCCCAAAGAAGCCACTAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAATCGGGTATTGGACCCAAAAAAGTCGCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGCGATGAGGTGATCGAAGCTCTTCAAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAATTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAATTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTATACAGAGCCAATTTTGATTCGGAAGTAAAGTACCTGAGAAAATCTTTTCAAACCCTTGAGGGTGCAAGTGACGAATTGAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCAGTTCTTAAGACAGGAAATAGGATGAATGTTGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTGTTAAAATTAGTAGATATAAAGGGAACGGATGGAAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGTTGATTCAACTAATGACAACCTTCAACCCCGCACGCAAGCTAAAATTGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGTCTAAGCAGAGACCTCAGCAATGTAAAAAAAGCGGCAGGGATGGACTCAGATGTCTTGAGCAGTTACGTCACAAAGCTCGAAATGGGGCTCGAAAAAGTAAGGCTGGTTTTGCAATTTGAAAGGCCAGGAATGCAGGGAAAGTTCTTCAACTCAATGAAAGCATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATTAAGGCTGACGAAAGACAAGCTTTATCGCTCGTAAAAGCAGTCACGGAGTATTTCCATGGTGATGCTGCTAAGGAGGAAGCACATCCCTTCCGAATCTTCATGATCGTTAGGGATTTCCTAACCGTACTGGATCAAGTATGCAAAGAAGTCGGGACAATGCAGGACGGAGTAATGGTTGGTGCTGCTAGATCCTTTCGGATATCCGCTACAGCCTCACTCCCAGTCCTCAGCAGGTATAATATCAAACAACACGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGAACTCCCATAACTATACCTTTTAGGAAGTTCATCAGGTTAGCTTAATCCTCCCCATTAATGGAGCAGAGGGAGAATTTCACTAGTTCCGTAGATATTAAGCATCTTTCAGTCCAAAAAACACAAATGGGTGAGCAGAGAATCTCCTTTTAGAGAAAGCGATGCCCCGGCGAGGTTTGTCCGTTACTCAAAACACGGTTTCCTACAGGGGAATAATGATAGATTAGATTTTGTAGCAAAAAGGCAACAAGGACATGATCAAAGTTGATGAAAAAAACACAAAAATACAGCATGGGAAGGAGCAATGGCAACACTGAAAGGTACGTTTCAATGAAATGAAGTGAAAGATGAATAAAAAAGATATAAAGAAGATAAAGAAAGAAAGTGATTTGAAACAAAAACACATTCCCCTCCCTCGATATTATTATTCCACTTGAGAATACACAACTATAGATAGGACAGAGTTTCTCTATTTAGATCAGATTCCTACACATTTCCAGAGAAAGTAGAATGTTTTTGACTTGTTGGGTAATATGTTCTTGCATTTGTTCAATGTTTACTAATAATAAATATCAATTTTTTTGTTCAAA 3512 44.93 MKAHRLSFFISFLSLFATFITARGLTFLHDSGIPYRRILHQPLFPIGSEPPADIDLSPPPPPPPDSPSDDQPFFHELPTSPDQSQPSPSSNTNGTMPIPASTAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGNNPERFVEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDDESQDTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNPPPPIPHSKRTSPKSRFSVSSTKRTRPQPQPPPPPPPPPRSFDDFRETPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSATFPQVPQPAAAPPPPPTTPTGPPPRPPARPASYTTPQKLGLSETRMSAVTPPDSSKSQIYSTARSNSSPKSTPSSATTNSAKDVVPRINSMEKLESEDAEGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEIPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASDELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGVDSTNDNLQPRTQAKIEDEFRKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFERPGMQGKFFNSMKAFLKEAEEEIVRIKADERQALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTVLDQVCKEVGTMQDGVMVGAARSFRISATASLPVLSRYNIKQHDRSSDEDSSSP 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45542894 45547557 + XM_039045407.1 Bhi10g01813 48154

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01813 910 Coils Coil 805 825 - -
Bhi10g01813 910 Gene3D Formin, FH2 domain 456 869 IPR042201 -
Bhi10g01813 910 PANTHER FORMIN-RELATED 8 910 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bhi10g01813 910 MobiDBLite consensus disorder prediction 373 398 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 295 309 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 210 226 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 49 108 - -
Bhi10g01813 910 ProSiteProfiles Formin homology-2 (FH2) domain profile. 463 884 IPR015425 -
Bhi10g01813 910 SUPERFAMILY Formin homology 2 domain (FH2 domain) 315 869 - -
Bhi10g01813 910 SMART it6_source 463 873 IPR015425 -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 52 69 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 230 282 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 182 197 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 402 452 - -
Bhi10g01813 910 Pfam Formin Homology 2 Domain 468 858 IPR015425 -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 77 108 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 310 327 - -
Bhi10g01813 910 PANTHER FORMIN-LIKE PROTEIN 6 8 910 - -
Bhi10g01813 910 MobiDBLite consensus disorder prediction 182 455 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01813 - - - csv:101208011 1452.19
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02104 Bhi-Chr2:57078302 Bhi10g01813 Bhi-Chr10:45542894 1.35E-128 dispersed
Bhi05g00035 Bhi-Chr5:788966 Bhi10g01813 Bhi-Chr10:45542894 1.59E-175 dispersed
Bhi09g03005 Bhi-Chr9:77909228 Bhi10g01813 Bhi-Chr10:45542894 9.28E-32 dispersed
Bhi10g01479 Bhi-Chr10:35503288 Bhi10g01813 Bhi-Chr10:45542894 2.44E-129 dispersed
Bhi10g01813 Bhi-Chr10:45542894 Bhi02g00293 Bhi-Chr2:5505982 2.15E-34 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi05g00035 . 667 1108 FH2 protein (formin) Gene Family AT3G25500 76.5 1.7e-186 651.0
Bhi10g01813 . 434 889 FH2 protein (formin) Gene Family AT3G25500 60.3 8.3e-141 499.2
Bhi02g02104 . 498 895 FH2 protein (formin) Gene Family AT3G25500 51.7 1.1e-103 375.9
Bhi05g00035 . 671 1122 FH2 protein (formin) Gene Family AT2G43800 61.0 1.4e-141 501.5
Bhi10g01813 . 467 906 FH2 protein (formin) Gene Family AT2G43800 54.5 2.7e-124 444.1
Bhi10g01479 . 250 588 FH2 protein (formin) Gene Family AT4G15200 51.0 1.1e-52 205.3
Bhi09g01953 . 445 591 FH2 protein (formin) Gene Family AT4G15200 65.5 5.3e-47 186.4
Bhi09g01952 . 445 594 FH2 protein (formin) Gene Family AT4G15200 64.2 2.2e-45 181.0
Bhi09g01953 . 446 882 FH2 protein (formin) Gene Family AT5G54650 68.9 4.0e-168 589.7
Bhi09g01952 . 446 885 FH2 protein (formin) Gene Family AT5G54650 68.5 1.7e-166 584.3
Bhi10g01479 . 442 906 FH2 protein (formin) Gene Family AT5G54650 63.0 5.2e-160 562.8
Bhi05g00035 . 682 1083 FH2 protein (formin) Gene Family AT5G54650 50.8 1.5e-103 375.2
Bhi10g01813 . 35 909 FH2 protein (formin) Gene Family AT5G67470 57.0 3.2e-226 782.7
Bhi05g00035 . 663 1125 FH2 protein (formin) Gene Family AT5G67470 58.9 1.5e-135 481.5
Bhi02g02104 . 498 897 FH2 protein (formin) Gene Family AT5G67470 50.9 3.1e-104 377.5
Bhi07g01666 . 349 837 FH2 protein (formin) Gene Family AT1G59910 51.1 1.8e-123 441.4
Bhi05g00035 . 703 1084 FH2 protein (formin) Gene Family AT5G48360 52.6 1.4e-100 365.2
Bhi10g01813 . 491 866 FH2 protein (formin) Gene Family AT5G48360 50.5 1.1e-89 328.9
Bhi10g01813 . 471 865 FH2 protein (formin) Gene Family AT3G05470 51.6 1.2e-105 382.1
Bhi09g01953 . 451 865 FH2 protein (formin) Gene Family AT3G05470 50.1 4.7e-105 380.2
Bhi05g00026 . 912 1223 FH2 protein (formin) Gene Family AT1G42980 51.1 4.1e-69 259.2
Bhi05g00026 . 1 1230 FH2 protein (formin) Gene Family AT1G31810 65.9 0.0e+00 1254.2
Bhi02g00293 CCT 1272 1593 FH2 protein (formin) Gene Family AT5G07650 74.8 9.3e-129 458.8
Bhi08g01136 CCT 990 1300 FH2 protein (formin) Gene Family AT5G07650 69.5 4.8e-117 419.9
Bhi09g03005 . 1090 1412 FH2 protein (formin) Gene Family AT5G07650 64.4 6.3e-109 392.9
Bhi02g00881 . 959 1278 FH2 protein (formin) Gene Family AT5G07650 62.3 2.4e-108 391.0
Bhi02g00882 . 712 1031 FH2 protein (formin) Gene Family AT5G07650 62.3 2.4e-108 391.0
Bhi05g00026 . 896 1227 FH2 protein (formin) Gene Family AT5G07650 59.6 9.1e-108 389.0
Bhi02g00293 CCT 1199 1586 FH2 protein (formin) Gene Family AT5G07770 69.7 2.7e-141 500.0
Bhi08g01136 CCT 913 1300 FH2 protein (formin) Gene Family AT5G07770 62.7 8.5e-127 451.8
Bhi09g03005 . 1013 1404 FH2 protein (formin) Gene Family AT5G07770 59.0 1.4e-118 424.5
Bhi05g00026 . 832 1221 FH2 protein (formin) Gene Family AT5G07770 55.8 8.8e-116 415.2
Bhi02g00881 . 882 1270 FH2 protein (formin) Gene Family AT5G07770 57.1 7.4e-115 412.1
Bhi02g00882 . 635 1023 FH2 protein (formin) Gene Family AT5G07770 57.1 7.4e-115 412.1
Bhi09g03005 . 1006 1412 FH2 protein (formin) Gene Family AT3G32400 76.4 6.8e-170 594.7
Bhi02g00881 . 889 1279 FH2 protein (formin) Gene Family AT3G32400 68.9 3.6e-147 519.2
Bhi02g00882 . 642 1032 FH2 protein (formin) Gene Family AT3G32400 68.9 3.6e-147 519.2
Bhi05g00026 . 832 1226 FH2 protein (formin) Gene Family AT3G32400 66.0 3.0e-141 499.6
Bhi02g00293 CCT 1199 1593 FH2 protein (formin) Gene Family AT3G32400 65.2 1.1e-140 497.7
Bhi08g01136 CCT 913 1303 FH2 protein (formin) Gene Family AT3G32400 60.7 4.0e-130 462.6
Bhi09g03005 . 1 1412 FH2 protein (formin) Gene Family AT2G25050 51.3 0.0e+00 1161.4
Bhi02g00881 . 1 1279 FH2 protein (formin) Gene Family AT2G25050 51.1 2.0e-292 1003.0
Bhi02g00293 CCT 1200 1593 FH2 protein (formin) Gene Family AT5G07780 63.3 6.9e-124 441.8
Bhi08g01136 CCT 914 1303 FH2 protein (formin) Gene Family AT5G07780 57.9 2.1e-112 403.7
Bhi09g03005 . 1015 1405 FH2 protein (formin) Gene Family AT5G07780 54.5 3.0e-103 373.2
Bhi05g00026 . 833 1222 FH2 protein (formin) Gene Family AT5G07780 52.7 1.1e-102 371.3
Bhi02g00881 . 889 1278 FH2 protein (formin) Gene Family AT5G07780 53.5 3.1e-100 363.2
Bhi02g00882 . 642 1031 FH2 protein (formin) Gene Family AT5G07780 53.5 3.1e-100 363.2
Bhi02g00293 CCT 1 1602 FH2 protein (formin) Gene Family AT5G07740 58.4 0.0e+00 1157.9
Bhi02g00882 . 642 1023 FH2 protein (formin) Gene Family AT5G07740 66.9 7.0e-139 493.4
Bhi02g00293 CCT 1271 1600 FH2 protein (formin) Gene Family AT5G07760 74.4 4.3e-127 453.4
Bhi08g01136 CCT 989 1303 FH2 protein (formin) Gene Family AT5G07760 69.0 4.9e-115 413.3
Bhi02g00881 . 958 1278 FH2 protein (formin) Gene Family AT5G07760 64.4 5.3e-109 393.3
Bhi02g00882 . 711 1031 FH2 protein (formin) Gene Family AT5G07760 64.4 5.3e-109 393.3
Bhi09g03005 . 1089 1421 FH2 protein (formin) Gene Family AT5G07760 64.0 9.0e-109 392.5
Bhi05g00026 . 906 1227 FH2 protein (formin) Gene Family AT5G07760 61.0 5.5e-106 383.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007546 2 1 2 3 2 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 36