Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01880 CCCCTCGTTAACTGAAAAAGGAAAAGGAAGGAACTGGTTAATGAGCTGAGCTGCCATGGCTGCCCAAAGCTTTTGGCTTTACATATCCATGGTTCTAAGTTTGGTGGCGATTTTATCATCATATGGGAATTGCAGCTTTGGAACTCACTTCCCCATTGAAGAAGCAACGGTGAAAGATCTCCAACTTGCTTTCTACCAAAACAAACTCACCTCCAGGCAACTTGTCAAGTTTTACCTCAAACAAGTGCGTAGATTTAACCCCATTTTGAAAGGGATCATAGAAGTGAATCCAGATGCTTTAGACCAAGCCACTAGAGCCGATCATGAGCGAAAGAGAAGCTCGCTGAGCTCTTTGTCACCATTGCATGGCATTCCTGTACTTCTAAAAGATAACATTGCAACCAAGGATAAGCTCAACACAACGGCTGGCTCCTTCGCTCTGCTTGGCTCTATTGTTCCTCGTGATGCAGGGGTTGTGACCAAGTTGAGAAAGGCAGGTGCAATCATCTTTGGAAAAGCGAGCCTGAGCGAGTGGTCTCAATTCAGGTCCAATCTCCCCAATGGTTGGTGCGCAAGGGGTGGCCAAGGCAAGAATCCTTACACAATGGGAGAACCTTGTGGCTCGAGTAGCGGCTCTGCCATATCCGTTGCAGCAAATATGGTTGCAGTTTCACTAGGAACTGACACTGATGGATCAATATTATGCCCTTCTACTTACAACTCAGTAGTTGGCATCAGACCAACAGTAGGTCTCACCAGTCGAGCTGGGGTTGTTCCGATCTCTTCGAGACAGGATGCTGTTGGGCCTATTTGTAGAACAGTATCAGATGCTGCTTATGTTCTAGATGCCATTGTAGGAGCAGACAAATATGATAATTCAACAATTGAAGCATCAAAATACATTCCAAAAGGTGGGTATGGCCAATTTCTGAGGCCTGATGGGCTGAAAGGAACGAGAATAGGAATCGTGAGGAAATTCTTTGATTTTGGCGACGATGGTGTCTTCTACTCTGAAGCTTATGAGAAAGTTTTCAAATCCTTGAAGCAAGGAGGAGCAATATTGGTGGACAATCTGACGATAGACAGCCTAGACATAATCATTGGTGGTTTAAGTGGAGAGTGGACTGCATTGCCAGCCGAATTCAAAATATCCATAAATGCATACCTCAAAGAGCTAGTTGCTTCTCCAATTCGATCCTTATCAGATGCAATAGAATTCAACAAAAAGAACTCAAAACTTGAGAAGCTAAAGGAGTATGGTCAGGTGTTGTTTCTAGAAGCAGAAGCCACAAATGGAATTGGAGATGTAGAAAAAGCAGCATTAGCCAGCGTAGCATCACTGTCAAAAAATGGATTTGAGAGAGTAATGATTAAGAATAAACTTGATGCAATAGCAGCACCTGGTGGGTTAATCTCTCCTGTTCTTGCAATTGGAGGCTTTCCTGGAATTAGTGTACCAGCTGGATATAGCCCTGATGGGGTACCTTATGGCATTGGCTTTGGAGGATTAAAAGGGTTTGAACCAAGGCTGATAGAGATCGCATATGGATTTGAGCAATTGACTAAGAGTAGAAAGCCCCCTTTAATTAAGAGACATTAAATTATTCATCTATGGATGAAATCTTAAGACAGACTTTAGTAAGTTTGCCACAACCAAGTGGACTTATAATGTTTAATCCTTGTGATGAAACTACATGCTTCAATAAGTAATAAAATGTTTCCATTAACTTA 1731 42.58 MAAQSFWLYISMVLSLVAILSSYGNCSFGTHFPIEEATVKDLQLAFYQNKLTSRQLVKFYLKQVRRFNPILKGIIEVNPDALDQATRADHERKRSSLSSLSPLHGIPVLLKDNIATKDKLNTTAGSFALLGSIVPRDAGVVTKLRKAGAIIFGKASLSEWSQFRSNLPNGWCARGGQGKNPYTMGEPCGSSSGSAISVAANMVAVSLGTDTDGSILCPSTYNSVVGIRPTVGLTSRAGVVPISSRQDAVGPICRTVSDAAYVLDAIVGADKYDNSTIEASKYIPKGGYGQFLRPDGLKGTRIGIVRKFFDFGDDGVFYSEAYEKVFKSLKQGGAILVDNLTIDSLDIIIGGLSGEWTALPAEFKISINAYLKELVASPIRSLSDAIEFNKKNSKLEKLKEYGQVLFLEAEATNGIGDVEKAALASVASLSKNGFERVMIKNKLDAIAAPGGLISPVLAIGGFPGISVPAGYSPDGVPYGIGFGGLKGFEPRLIEIAYGFEQLTKSRKPPLIKRH 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46921479 46924300 - XM_039044985.1 Bhi10g01880 48221

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01880 514 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 18 512 - -
Bhi10g01880 514 SUPERFAMILY Amidase signature (AS) enzymes 33 509 IPR036928 -
Bhi10g01880 514 Gene3D Amidase signature (AS) domain 25 510 IPR036928 -
Bhi10g01880 514 PANTHER AMIDASE 18 512 - -
Bhi10g01880 514 Pfam Amidase 56 449 IPR023631 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01880 K01426 E3.5.1.4, amiE; amidase [EC:3.5.1.4] - csv:101215057 801.971
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi05g01736 Bhi10g01880 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01735 Bhi-Chr5:55945186 Bhi10g01880 Bhi-Chr10:46921479 0 dispersed
Bhi05g02070 Bhi-Chr5:63059400 Bhi10g01880 Bhi-Chr10:46921479 3.97E-36 dispersed
Bhi10g01880 Bhi-Chr10:46921479 Bhi11g00379 Bhi-Chr11:9044566 4.87E-32 dispersed
Bhi10g01879 Bhi-Chr10:46915787 Bhi10g01880 Bhi-Chr10:46921479 0 tandem
Bhi10g01880 Bhi-Chr10:46921479 Bhi10g01881 Bhi-Chr10:47003184 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g125 . . . . . . . . . . . . . . Sed05g2230 . . Bhi05g01736 Tan02g0704 Cmetu01g0664 . Hepe02g0439 . . Cla02g00441 Cam02g0450 Cec02g0449 Cco02g0468 Clacu02g0452 Cmu02g0447 Cre02g0780 . . . . . Csa07g00086 Chy11g00285 Cme01g01279 . Blo13g00523 . . . . . . Sed01g0214 . . . . . . . . Bhi10g01880 Tan05g1177 Cmetu11g0691 . Hepe08g0270 . . . . . . . . . . Csa02g01364 Chy01g00693 Cme11g00407
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000457 1 5 3 2 1 4 2 4 4 5 3 4 2 5 6 2 4 6 1 5 5 5 4 5 4 1 5 4 8 7 117