Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01891 ATTACGTTTGTCATCAAGCTGAAATTTCAAGAAGCGTCAGTCGCACCTTATCAACACAGCTTCGCACGCCGAAAATGCATCTGAGAATTCTGAAAGTGGGCGTATCCAGCAGCAATGGATCAACTAATTCAACGCGACGATCTGGTTCAGAACCTGGCCACACCCTCCACCTCCATTGCACCGTGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAGTTCCAGGTCTGAAGGGGAGTTCAAGGATTCTGCAACTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGCCGTTTGAATGAACAATTTGTCGAGCTGGGAAACATTTTAGATCCCGACAGGCCCAAAAATGACAAAGCAACCATTTTAATGGATACAATTCAGCTGCTGAAGGATCTGACGTCTCAAGTGAACAAATTGAAAACTGAATATGCTACTTTAACAGAAGAATCAAACGAGCTAGCCCAGGAAAAGAATGATCTGAGAGAAGAGAAGGCGTTGCTTAAATCTGATATTGAGAATCTTAATGCTCAGTATCAGCAGAACCTAAGAGCTACATACCCTTGGGCTGCCATGGATCACTCGGTTGTCATGTCTCCTACCCCCTTCCCATTTCCAGTGCCGATGCAAATGCCTCCAGGGCCATTTCCCCTACATCCATCCTTGCAGCCTTATACGTTCTTTGGAAATCCAGATCCCAGGGTAATCACAAACCCTTGTTCCACCTTTGTCCCATTCGTACCTCCTAATTCCTTGACTGAGCAGCAGTCCTCTCGAAATGCACCGCCTTTCATTCAGTCAGGCAATCAGTCTCATAACTTGAGCAAGCAAAGTACCGGGAGCAAGTCCTCAAGTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCTACTTACCTGGAGTTGAAAACTCCTGGATCTTCTACAGATCAGGATACATCGTTTGAACAAACAAACAGTAAGAACAGACAGGAAAATAATCTATCAGCAGAGAGTTCCTTAAGTAGATGTTCTTCATCTTGTAGTTTAGAGCCCAATTCGTTTAGTAGCACGCCAAAATGAACGAAAATCTACTGATATATGTGGAAAGCCATAAAAGTTGCAGGTTCACCCAAATTAGTCCCCGAATTTTATTTTCGATGGTCTATAACTTACTAAAATACTTCTCAGTGCTTTTCTATTTATCTGCAAATAAGGTGGATCATCTTCAATGCAATGTAAAGGGCCTTCACAAAATTAAAAGTATTTTGGGATTGTGAACTATTATATTCTTACCTTACCTCCTTTATGACGTCCTCAAAGTTGCAGCAGTCATTTAATCCGTGTTCATCTTATGTACTTGGACATGGCTGTGGATGTGCAAGCAATAAGGTAATGGTTCTAGGGTTGTCTTGCTGCAAAAATCCCACACTGAGAAACTAGCTAAAGCACTCTACAGATGGTTGGTCCATTCGTCTGAATACTTTTCGTTTTCCTGATGCTAAAATTCCCAGGTTATGTCATTGTTGATGTATGACAGACAATGTGACAGAGATATCTGGTCTCAAAAACCATGTGGAAATGACTCTGAGAGCATGTAGATGTGAAATATACATGCATGATATTCTGGGATATTATGTCAAAATTTTGAATCAAGAGACTGTGACTTGTCGTTCATGCTTGATCGATTGGGACATGATCGAATGGGAGCAATCGCACCATCATTGGCTGTAAGGCCAAGAAGGTGAAAATAATTGTGAGGAAAGAATGAAAGGACATGAATGCTGAAGGAGAATGTGGGGGAGAGGCCATTAATGCTGATATTATCCAGAAATCTGAAGGTCTTGAATGAAAGGTGGAAAAGCATCCATATTATGAGTGCCCAAAGACAGATTGCTTTGTCTGCTGCTTGTGAAAATCTAGATATGTTTAAACTTGTTCATAGGATATTGGTGAAGTAGAAGAGTGCAAGGGAGTTGGAGCTTTCTACTGGCCTTAGAAATTTCTTAGAGTGATGTTGAGTTAAAGTTTACTTTTGATTTTTTGGTCATAATCTAAGAGCGTTGTCTAAAGATTTAAAGAGAAATGAGTTTTAATATAATCCAATTTTTTTAAAAAA 2119 40.63 MDQLIQRDDLVQNLATPSTSIAPCIELPGHPIRSQSSSRSEGEFKDSATARKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLTSQVNKLKTEYATLTEESNELAQEKNDLREEKALLKSDIENLNAQYQQNLRATYPWAAMDHSVVMSPTPFPFPVPMQMPPGPFPLHPSLQPYTFFGNPDPRVITNPCSTFVPFVPPNSLTEQQSSRNAPPFIQSGNQSHNLSKQSTGSKSSSESKIEKSVDSNEVATYLELKTPGSSTDQDTSFEQTNSKNRQENNLSAESSLSRCSSSCSLEPNSFSSTPK 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 47505098 47508860 + XM_039046607.1 Bhi10g01891 48232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01891 322 Coils Coil 90 145 - -
Bhi10g01891 322 MobiDBLite consensus disorder prediction 44 60 - -
Bhi10g01891 322 MobiDBLite consensus disorder prediction 269 322 - -
Bhi10g01891 322 Gene3D - 49 129 IPR036638 GO:0046983
Bhi10g01891 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 119 IPR036638 GO:0046983
Bhi10g01891 322 SMART finulus 56 106 IPR011598 GO:0046983
Bhi10g01891 322 MobiDBLite consensus disorder prediction 218 322 - -
Bhi10g01891 322 PANTHER TRANSCRIPTION FACTOR BHLH121 33 316 IPR044579 GO:0003700|GO:0055072
Bhi10g01891 322 CDD bHLH_AtILR3_like 55 129 - -
Bhi10g01891 322 MobiDBLite consensus disorder prediction 25 60 - -
Bhi10g01891 322 MobiDBLite consensus disorder prediction 218 253 - -
Bhi10g01891 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 50 100 IPR011598 GO:0046983
Bhi10g01891 322 Pfam Helix-loop-helix DNA-binding domain 51 100 IPR011598 GO:0046983
Bhi10g01891 322 PANTHER TRANSCRIPTION FACTOR BHLH121 33 316 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00866 Bhi10g01891 CCT
Bhi03g00866 Bhi10g01891 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00866 Bhi-Chr3:15881477 Bhi10g01891 Bhi-Chr10:47505098 1.44E-98 dispersed
Bhi10g01891 Bhi-Chr10:47505098 Bhi11g00654 Bhi-Chr11:15317417 3.27E-19 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2238 PF00010 HLH 1.20E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01891 - - csv:101213608 488.419