Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01894 AATTTAATTCACATAACCTACACAATTTTTTGAATCATGTATCTGTAGCCACGCCGGCAACACTTGCGCACGAGCACAGCAGCAAACGGCGACCCCAGCGTACCATCACTTCCCTTCTGTTTTCTCCTCACCGGAATCTTAGAGTAGCGACGAACGACGTCCACACCATACTCCAGCGCCCACAGCAACGTTCCCTAGTCGAACCACACTTTGAACTACTCAGCAGTGTTTTGTCTTGTTTCATGAAATTTGCTAAGTACACACTCACCGTCGACTTTGTAAATCGGTCATGCCATTCACAATGCAGTTGCAAGTAAATCTAGCAGTGATTTAGTGGATGTTGTTAATGGTGGAGGTAGAGTCGAAAGAGAAGAATTCAAAGATGAAGAGTAAAAAGAGGAAGCTAAAGAGTCCTATAAAAACTGTTAGGCCTTCCAAGTCTGCTCGAGTTTTCATCTCAGCGGAAGTGGAAGATGTAGATGAAACAGAACGGGTTGAGAAGTTGGCGCAAAGAGAAGTGTCTCAAGAGTCTGAAGAAGGTGGTCCATGGAGGAACTTGGAATTGATTTTGTTTGTTCAGAACAAAGAGCTCGACCAACAAAAGAAGGTCGAAGCCGTTTTTGGCTTTGTAAACTCGAAGTTGAAAGAGAAAGATAAATGTTATGATACGGTAAAAATATCGCGCTTGATAGTTTTTCTTAGTGATTGGGTGCAGTCATTGTTGATTTCATCTCAAAAGAAAACCAAGAATGATGGTGGAAAACATATTAACGTAGTTGTTGAGCCATGCTTAGATTATAGATGCTGGGAGGTTTTTAAATTTTGTTTGGAAGAATCAGTGAAAACACGCATCACTTTGAACCTCTCAAAAAATCTTTTGCATGCCTTTTGTTTTGTTACAAGGCATGCGATATCCCTACTAGCTGCTTCGTTGAGTTCAAAAGAAGAGTTATTTGGTGGGGATTGTTTCAAGTTGTACAATATCGTGCTTGATTGTGTTTCTTTAGTATTTTCGCCCCACCTTGGTCTATCCAACGAGAATTTAGATGCTTGGATTTCTACAATTGATGCAGCGCTCGAGTTTCTTCACATAATTTATGTAAATAACTTGGAAGGTGGAGATGTAGGCACTTTTGCTATTAAATTTTCGTGTATGATGCTTGAACCTTTTGCTAAATTTTTGTGGATTCACCCTACCAAGAAAACTGGATTTCACAATTTTGTCAATAAGCTTTTGGAACGTTTACTGCAATTATTGTGTGATATAAGCCTTAAAGCTGATGGATGTAAGCATTATTGGACAAGAACTTTGATGAAGTTACTTGAAGAAGTTCTATCTCATGCTTTGTTTCATACTGTGCATATCGAAGGATTTTTGTGCTTACATGGTCCAGAAAAGGTTATGAAATCCCATGATGAGAAATTGGAAGAGTCTAAAGCACATATTATGAGCTACCATAGACATTTATTTGATAAAGTGCAAAAACTAGTTGCAGGAAAGAAGTTTTTGGCGTTGGGTGCAGTAGGAGAATTGTTTCATGTGCTTGTTGTCAGAGTTAAAAAGGTGAAAGAGGCTTCAATGTCATTTGAGGACACCAAACTGAATAACACAATGGGTCTTTTGGGACCTTTGAGGGATGATATATCAAGTCATGCATCTTTTGCGCTTCTAGGAAGTCCCGATGGACTATCAGAGAAAAGCAATAACGAGAGCAATTTGAGTACAGAAATAAGGAGGTCTCTTTTTGAGTTTTTTGTACAGATTTTGCATCCTTTACTTCAAACAATTGAACTCATTAGCGCTGAGATTAAACTGGGATCAACCTTGTCAGATGTTCATTCCTTACTCAAATCAATAAATAATGTACTCGCAAGTTTTATGAAGGAAAATGTGTACTTGAGAACTGAGGATAACTCTGAAGGGGCTTGCCATAATTTCTTAAAAAAGGTGTATGATACAATAATGTTGGTTTCCTCTCATTTACTATTATTATCGAGGCTTGAGATAGAAAGCAATATAGACCTGGAAGTGTTTGTTTTAGCAGCAAATGAGATACTGGTGACTCTTGGCTATCTTCTGGAAATTGAATATGATGTGATTGAGAATGATTTGGTGAGCTTATGGATGCTAATCCTTTCTTACTCTGCTTTTAATCTTTCTTTCACAAGCGTATCTAAACAACACTTGTTAACTTCCAAGATTCAAGAGCTTGGATGTCAACTGGTCGTGTTATATAGTCAGCTGCGGCAGGTCAACATCAGTATTTTTGCTCTATGTAAAGCTATGAGGGCAGTGGTATCAAATGAAGGTGAAACTGAAAAAGAATATGCCAGCTTTATGACTTCTTTAGGTCATGAAGCCTATGGTAAATCAGTTGGGATGTTACTTTCTTCCCAAGATATAAAATTTGCAATCCATAAAGCTATTAAATATATACCCGAAGGGCAAGCTAGTGGAATTATTCAGCAGTTAACTGAGGATGTGACAGAGACTTTAGGATGGTTGAAACTGTGTAATCTGAACTTGATTATAAGAAACAAGACAGGGGGCTCAGATATGCAACCTGTGCTTCTTGGGAGAGGGTTCTCTGAAGTATATGCTCTGATATTGGATTCACTGATGATCACATCTGGCAATGCTTTCCAAGTTGGAACTTTAATTGCGAACTTGGTTTCAGCAATACGTCCTTGCATGAGTAGTTTAGTTGGACTACAGTCAGATGGTGCCAAAGCATTCTTCCTTGCTGTCATGGGAAAAACATGGGATGATTTGGTTGCTAATGAAGAAAATTGTCTTGGATTTGGAGTGGCCAGTCATTGGGTCTTTATTTTCTTCTTTCGCTTGTACATGTCCTGCCGGAGCCTGTACAGGCAAGCAATTAGCCTGATGCCCCCAAGTTCGTCTAGAAAGATGTCAACAGCAACTGGAGACTCATTCATGGCCTATTCTGCTTGTGATTGGATGCAGAGGACTGATTGGAGTGATGAAGGATATTTTTCGTGGATAATTCAACCTTCAGCTTCTGTTCTTTTTGTTGTGGAATCTGTTTGTAGTCTTTATCATCAAAGCACCAACGTAGGTTGGTACCCTTTGATTTATGTATTGCTTACCATGGCTATTCAGAGGTTAGTGGATTTGAATAAGCAAATAGGCTCTCTCGAGTATTTGCACCAGAGAAATGAAAATTTGATGCAGGTTGAGGTGCTTAGTGATGATGATTTGTCAGTGTTACAGAAAAAGAGAAAAAAGTTTGGAAGGCTTGTCTCTGTTTTGCGAAAAGAAGCAGAAGATCTTACTGATTTTGTGATGAGCCATTTATCTTTAGTAGCTAAACGTCATAAAAGAAATGCAACTTCAAATGATAAATCTACTGAAATACTTAGTGAGATCGATGAATGGGACTTTAATATTTCTAATGTGAATAAAAGGTCATTCCCCACAGCAGTTTGGTGGATTGTTTGCCAGAATATTGATATTTGGGTGACTCATGCTGCTAAAAAGAAGTTAAAAATGTTTATTTCTTTTTTAATTCCTACGTCTCTTTGCTTCTTTGCAAGCAATCATACTAAGATTGGAACACAACAAACCTGTGGATATCGGCAGCCAAAGAAAGTGTCTCTGCAACAAATTTCATCAGCTGTTCTAAGTGATCCTATCTTTTATGAACACAGATTTGTATGCAGGTTTATGCCATCAAGGTTTTGTCGTGAGTTAAAGGCTTCGTTATTATCATATTTTCATGTTATTTATAGAAGTCCAGCTGATTGGATGGAGGTGATAGCCACACTTGAGTGCTTAACTATAGGCATTTGCAGTGGCCAACGTACTCCTGATGATAATGCTCTCCTTGACAATCGTTCATCTGATATGTTGCATACAGAAGATTGCAAGTTGAAGGGTGAGTCACGTCAAAGCAATAGGGGAATCAGAGATTGTAAATATTTGATTAACCTTTTATGTTTGATGCCAATGGGAAATATGAGTTCAAGGTCCTTTTCCCTTTATACGACATATGTTCTCGAACTTGAAAGGATATTGGTGAATGCTTTATTAGATAATCAGACAGCTCTATGTTCAAATCAATTTGAACTCCTCAAATTGTTTGCATCTTGTCGGAAGGCTTTGAAATATATATTTACGGCTTACTATGAGGCTGATAATAGACAAAGCTCATCTACTCCAATTCCATCTGAAAATCGATTTCCTGTTTTATGGCTTTTTAAGTCTTTATCACTTATTAATCAAATTCAAGAAGCTTCTCGGGGAGGTACAGACAGACAAATTAAGGACATCATCTTTTCATTGATGGATCATACATCATACTTGTTTTTAACAACTAGCAAATATCAATTTAAGGAGGCGCTCTGCATAAGTGTAAATGACAACAAACCCTGCAAGGAGCAACACCAGGATGTTTGCCAAGAACTAAATGATGGAGACGATCTATGTTTAGATTCCATCCACAGTGTAGAAGTATGCAATAGTGCAATTCAAATGATTAACAGTCTGGAGGAACAGGTGGAGAGTGAACTTCTCTCTCTGAAGAAGTCTAATTTTGCAGTTGGAGATGCTAAAAACAGTACGGATATGTGTAAATTTAATTCTCTAGCTTCTTGCCTCAATGGATTTTTGTGGGGCCTAGCATCTGCTATTGACCACACTGATTTCAGGAATGGTAACCGTCATGTGAAATCAATCAAGTTGAAATGTGAATATAGTTCTCGACTGAATCATTGCATGAATGCAATTTCAGAATTTTTAGGCCTCATCTTGGACATGTTTCTTGATAGAGACAGTCAATGGCCGACAAAATTGTGTGATTATCAAGCATCTCAAGACCTGTTGATTGTGAATGAGCTCTCTGGTAAGCACAACTCTGAGGCCGATACATCATTTAGTGAACTTCACGAATTAGAATCTTTTTATCGTGATGATAAAAGTGAAAATGCTAGCACAAAAAGGAGAAGGTTGAAAGTGGAGAATAAAAGCAGTTTTGCATCTGTTCTCAACGAGGCTAAGTCAATTGAGATGCAATCCTTGAACCAACCCTTTTTTCGAGGTCTGCTGAAAGGTTCCTACCCTGAAGCAGAATTTGCACTTAAGCAGCTATTTCTTGCTGCTTCAAGAATTTTGAGATTGCATAAGCAATATGATACCACTCCTTTGTCATCAAGGTCTATGACCATCCTAATTAGCATTTCAAGATTCTTGTTGCTAGAATTTGTGGATATGGTTGAAGTGCCACAACCATTTGTGCTTTCATGCTTAGATGGTGTTCTAAAGTATTTGGAGGAATTAGGCCATCTTTTTCCTTTTGCTGATCCTGTGCAGTCCCGGAATATATATTCTAAACTTATAAATCTACATTTGAAAGCTGTAGGAAAGTGCATTTGTCTACAGGGAAAAGGAGCTACTTTAGCATCACATGAGACGGAGTCCACTACAAAGACTCTTGATGGGGGATTATTCAAAGAATCGTCTTTTCCTGGAGTTTACTGCATGGATGAATTTAAATCTTCATTGAGAATGTCATTCAAAGTGTTCATAAGGGAAGCCTCGGAATTGCATCTCCTATCTGCAGTTCAGGCTATTGAGAGAGCCCTAGTTGGAGTGCAGGAAGGTTGTACAACGATATATGAATTATATTCCGGAAGTGAAGATGGAGGAAGGTGTTCCTCAGTTGTTGCAGCTGGTGTTGAGTGCTTGGATTTGGTGCTTGAATTTGTTTCAGGACGTAAATGCATGGGTGTGATTAAAAGACACATTGAGAGCTTAACTGCTGCTCTGTTTAGCATAGTTCTACACTTGCAAAGTCCACAAATTTTCTATGTAAGAATGATTGCCACGAAAAATAGGAGTGATCCAGATCCGGGATCAGTCATTCTTATGTCTATTGAAGTACTTACAAGAGTTTCCGGGAAGCATGCTCTTTTCCAAATGAATGTTTGGCATGTAGCACAGTGTTTACGCATTCCTGCAGCACTTTTCAAAACTCTCTCTCTTAAGCTCCCAGGAATTCCAATTGAATCAGAATGTTCGTTGATCTCGGCTCAGGAAGCCTCCAATGTAGTTGTACCCACGAGTAATTCTATTATAGACAAACAATTCTCAATAGACCTTTTTGCTGGCTGCTGCCGCTTATTATACACTATTCTCAAGCATCGTAAAAGTGAGTGCAAGCGTTCCATTGCTCAACTACAGGCATCAGTATCTGTTCTTCTTCATTCCCTTGAAAGAGTAGGTCCAGACCCGAAATTTATGGGTGGTTACTTTTCATGGAAAGTAGAAGAGGGAGTAAAGTGTGCATCTTTTCTCCGAAGGATTTATGAAGAGATAAGACAACAGCGGGATATTGTAGGGCGACACTGCTCCCTGTTTCTTTCAAATTACGTTTGGGTTTACTCGGGACACGGTCCCTTAAAATCAGGAATTAGAAGGGAAATCAATGAAGCGTTAAGGCCTGGTGTCTATGCTTTAATAGATGCTTGTTCAGCAGAGGATCTTCAATACCTTCACACTGTATTTGGCGAAGGTCCATGTAGAAACACCTTGGCAACTTTGCAGCAGGATTACAAACAATTTTTCCAATATGAAGGAAAAGTATGATTCTAATATGATACAAACCATTTCTTTCTATGTTCATATATGATTCTAATATGATACAAAAACCATTTCTTTCTATGTTCATGAGATATGAGAGATCATATCCATATCATGCATAAAAGAAAATTTCTCAAACGAGCGGCTGCTTGATTGGAAAATACCGCCGAACACAGAATTCTGAGGTAAAGTTGATGCCTTCTTAACCATTGTTGATTTTTTTTCTCTGTGTAAATAAATTTAAGAAGTTCTCATTAATCTATTTCATACTATACTATTCGTTTTTACTTA 6892 38.32 MLLMVEVESKEKNSKMKSKKRKLKSPIKTVRPSKSARVFISAEVEDVDETERVEKLAQREVSQESEEGGPWRNLELILFVQNKELDQQKKVEAVFGFVNSKLKEKDKCYDTVKISRLIVFLSDWVQSLLISSQKKTKNDGGKHINVVVEPCLDYRCWEVFKFCLEESVKTRITLNLSKNLLHAFCFVTRHAISLLAASLSSKEELFGGDCFKLYNIVLDCVSLVFSPHLGLSNENLDAWISTIDAALEFLHIIYVNNLEGGDVGTFAIKFSCMMLEPFAKFLWIHPTKKTGFHNFVNKLLERLLQLLCDISLKADGCKHYWTRTLMKLLEEVLSHALFHTVHIEGFLCLHGPEKVMKSHDEKLEESKAHIMSYHRHLFDKVQKLVAGKKFLALGAVGELFHVLVVRVKKVKEASMSFEDTKLNNTMGLLGPLRDDISSHASFALLGSPDGLSEKSNNESNLSTEIRRSLFEFFVQILHPLLQTIELISAEIKLGSTLSDVHSLLKSINNVLASFMKENVYLRTEDNSEGACHNFLKKVYDTIMLVSSHLLLLSRLEIESNIDLEVFVLAANEILVTLGYLLEIEYDVIENDLVSLWMLILSYSAFNLSFTSVSKQHLLTSKIQELGCQLVVLYSQLRQVNISIFALCKAMRAVVSNEGETEKEYASFMTSLGHEAYGKSVGMLLSSQDIKFAIHKAIKYIPEGQASGIIQQLTEDVTETLGWLKLCNLNLIIRNKTGGSDMQPVLLGRGFSEVYALILDSLMITSGNAFQVGTLIANLVSAIRPCMSSLVGLQSDGAKAFFLAVMGKTWDDLVANEENCLGFGVASHWVFIFFFRLYMSCRSLYRQAISLMPPSSSRKMSTATGDSFMAYSACDWMQRTDWSDEGYFSWIIQPSASVLFVVESVCSLYHQSTNVGWYPLIYVLLTMAIQRLVDLNKQIGSLEYLHQRNENLMQVEVLSDDDLSVLQKKRKKFGRLVSVLRKEAEDLTDFVMSHLSLVAKRHKRNATSNDKSTEILSEIDEWDFNISNVNKRSFPTAVWWIVCQNIDIWVTHAAKKKLKMFISFLIPTSLCFFASNHTKIGTQQTCGYRQPKKVSLQQISSAVLSDPIFYEHRFVCRFMPSRFCRELKASLLSYFHVIYRSPADWMEVIATLECLTIGICSGQRTPDDNALLDNRSSDMLHTEDCKLKGESRQSNRGIRDCKYLINLLCLMPMGNMSSRSFSLYTTYVLELERILVNALLDNQTALCSNQFELLKLFASCRKALKYIFTAYYEADNRQSSSTPIPSENRFPVLWLFKSLSLINQIQEASRGGTDRQIKDIIFSLMDHTSYLFLTTSKYQFKEALCISVNDNKPCKEQHQDVCQELNDGDDLCLDSIHSVEVCNSAIQMINSLEEQVESELLSLKKSNFAVGDAKNSTDMCKFNSLASCLNGFLWGLASAIDHTDFRNGNRHVKSIKLKCEYSSRLNHCMNAISEFLGLILDMFLDRDSQWPTKLCDYQASQDLLIVNELSGKHNSEADTSFSELHELESFYRDDKSENASTKRRRLKVENKSSFASVLNEAKSIEMQSLNQPFFRGLLKGSYPEAEFALKQLFLAASRILRLHKQYDTTPLSSRSMTILISISRFLLLEFVDMVEVPQPFVLSCLDGVLKYLEELGHLFPFADPVQSRNIYSKLINLHLKAVGKCICLQGKGATLASHETESTTKTLDGGLFKESSFPGVYCMDEFKSSLRMSFKVFIREASELHLLSAVQAIERALVGVQEGCTTIYELYSGSEDGGRCSSVVAAGVECLDLVLEFVSGRKCMGVIKRHIESLTAALFSIVLHLQSPQIFYVRMIATKNRSDPDPGSVILMSIEVLTRVSGKHALFQMNVWHVAQCLRIPAALFKTLSLKLPGIPIESECSLISAQEASNVVVPTSNSIIDKQFSIDLFAGCCRLLYTILKHRKSECKRSIAQLQASVSVLLHSLERVGPDPKFMGGYFSWKVEEGVKCASFLRRIYEEIRQQRDIVGRHCSLFLSNYVWVYSGHGPLKSGIRREINEALRPGVYALIDACSAEDLQYLHTVFGEGPCRNTLATLQQDYKQFFQYEGKV 2089
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 47552294 47562793 - XM_039046727.1 Bhi10g01894 48235

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01894 2089 Coils Coil 47 67 - -
Bhi10g01894 2089 PANTHER UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG 61 2089 - -
Bhi10g01894 2089 MobiDBLite consensus disorder prediction 1 26 - -
Bhi10g01894 2089 Pfam Urb2/Npa2 family 1852 2088 IPR018849 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01894 - - - bhj:120089295 4066.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01894 Bhi-Chr10:47552294 Bhi10g01896 Bhi-Chr10:47552294 0 dispersed
Bhi10g01893 Bhi-Chr10:47552294 Bhi10g01894 Bhi-Chr10:47552294 0 tandem
Bhi10g01894 Bhi-Chr10:47552294 Bhi10g01895 Bhi-Chr10:47552294 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g98 . . . . . . Bma05g00411 . . . . . Car02g00212 . . . . . . . . . . . . . . . . . . . . . . Lsi10g00461 . Chy11g00299 . . . . . . Bpe05g00307 . . . . . . . . . . Cpe05g01309 Bhi10g01894 . . . Hepe08g0949 . . Cla02g01117 Cam02g1190 . Cco02g1246 Clacu02g1180 Cmu02g1140 Cre02g1456 . Csa02g01350 . Cme11g00421
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010116 0 5 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 31