Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01929 AGACCATCAATTAAGGAAACAAAAACCAAACGGCTTCTAAGCCATTCCCCTTCCCACACTCACCCTCACCCTCACCTTCTTCTTCTTCTTCTTCTTCCTCTCTTTTATCTCCGTTTTCCTTTCAGAAGCTCCTCCCATGGCGGTCGCCACCACTCTCAACCTCCCTTCTCTCTCTTCCTCTTCCTCTCTCTCTCATCACACTCCCTCTCTTCAAACCCCTCTTTCCATTTCCTCTAAAACCCTCCCAAAATCCCACTTTCCCCACTTCCTCTCCCTTCCCAATCCCCACAAACCCCTCTTCCTCTCCTCCGCCTCCGCCTCCAAATCCCCCATCTCCGATTTCTTCTCCGACGACGACTATCTCGACGAAAGACTCCGCGAGGAGTGCGGCGTCGTTGGAATCTATGGCGACCCAGAAGCCTCTCGCCTCTGTTATTTAGCCCTTCACGCTCTCCAGCACCGTGGCCAAGAAGGCGCCGGAATCGTCGCCGTCAACGAAAACGTTCTCCAGTCTATTACCGGCGTTGGCCTCGTCTCTGAGGTTTTCAATCAAACCAAACTCGATCAATTGCCTGGCGATTCTGCGATTGGTCACGTTCGTTACTCAACTGCGGGATCTTCTATGCTTAAGAATGTTCAACCCTTTGTTGCTGGATATCGATTTGGCTCTGTTGGGGTTGCTCATAATGGTAATTTAGTTAATTATCGTTCTCTTAGAGCTAAACTTGAAGATACTGGTTCTATTTTCAATACTAGTTCTGATACCGAGGTTGTTCTTCACCTTATTGCAATTTCTAAACATAGACCTTTCTTGTTGAGGATTGTGGATGCTTGTGAACAGCTTGAAGGAGCTTATTCTATGGTTTTTATTACTGAAGATAAATTGGTTGCTGTTCGTGATCCTTTTGGTTTTAGGCCTTTGGTTATGGGTAGGAGAAGTAACGGGGCTGTTGTATTTGCTTCTGAAACTTGTGCTCTTGATTTAATTGAAGCTACATATGAAAGGGAAGTGTTTCCTGGGGAAGTTTTAGTAGTTGATAAGAATGGGATTCAATCCCTTTGTTTAATGGCTCATCCAAAGCCTAAATCTTGCATATTTGAACACATATACTTTGCTCTTCCCAACTCGGTTGTTTTTGGCCGTTCTGTCTACGAATCCCGCCGAGCATTCGGGGAGATACTTGCCACCGAAGCCCCCGTCGATTGTGATGTAGTGATTGCTGTTCCAGATTCAGGAGTAGTAGCTGCTCTTGGTTATGCAGCTAAAGCTGGGGTAGCTTTCCAACAGGGTCTCATAAGGTCGCATTATGTCGGGAGGACATTCATCGAGCCATCACAGAAGATTCGTGACTTTGGTGTGAAGCTGAAGCTGTCACCGGTTCGAGCGGTGTTGGAAGGGAAGAGAGTAGTGGTTGTGGATGACTCAATTGTTAGAGGAACAACATCTTCAAAGATTGTGAGGCTGTTAAAAGAAGCAGGAGCAAAAGAAGTGCATATGAGGATAGCTAGCCCTCCAATTATAGCATCATGCTATTATGGAGTGGACACACCAAGTTCTGAAGAACTAATCTCCAACAGGATGAGTGTGGAGGAAATAAGAGAGTTTATAGGCTCTGATTCACTTGCTTTTCTGCCATTTGATAGTTTGAAGAAGCTTTTGGGAAGTGATTCTCCAAACTTTTGCTATGCTTGCTTTTCAGGGAACTACCCAGTTGAGCCTAGAGAAATAAAAGTGAAAAGGGTAGGAGATTTTGTGGATGATGGGTTGAATGGAAGCTTGGAATCCATTGATGGAGGTTGGGTTCAAGCCAACAGAAACCAGAATCTTGATAATAATCTCACAGTGGAGAAAGTTGGAGGTCTCTGATCTTTTACTTCTTATATCATCTTTGATTTTGTCTGTCTTTTCTTATATCCTTTAACAATGTTAGATTTATAGAAGTGATTTCTGATGGGAATGCATAATTTAGAGTAATAAGTTATGTAATGATTAATGAGCTCTGCAAGAAACGATTCTTACTTATGCAAATTTTGCATTCTTTGTTACTCTAAA 2053 43.69 MAVATTLNLPSLSSSSSLSHHTPSLQTPLSISSKTLPKSHFPHFLSLPNPHKPLFLSSASASKSPISDFFSDDDYLDERLREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVNENVLQSITGVGLVSEVFNQTKLDQLPGDSAIGHVRYSTAGSSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRSLRAKLEDTGSIFNTSSDTEVVLHLIAISKHRPFLLRIVDACEQLEGAYSMVFITEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVLVVDKNGIQSLCLMAHPKPKSCIFEHIYFALPNSVVFGRSVYESRRAFGEILATEAPVDCDVVIAVPDSGVVAALGYAAKAGVAFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKKLLGSDSPNFCYACFSGNYPVEPREIKVKRVGDFVDDGLNGSLESIDGGWVQANRNQNLDNNLTVEKVGGL 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 48149806 48151858 + XM_039046241.1 Bhi10g01929 48270

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01929 576 Pfam Phosphoribosyl transferase domain 342 453 IPR000836 -
Bhi10g01929 576 Gene3D - 343 507 IPR029057 -
Bhi10g01929 576 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 45 556 - -
Bhi10g01929 576 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 84 307 IPR029055 -
Bhi10g01929 576 TIGRFAM purF: amidophosphoribosyltransferase 84 525 IPR005854 GO:0004044|GO:0009113
Bhi10g01929 576 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 84 303 IPR017932 -
Bhi10g01929 576 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 45 556 - -
Bhi10g01929 576 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 84 525 IPR029055 -
Bhi10g01929 576 MobiDBLite consensus disorder prediction 1 26 - -
Bhi10g01929 576 Pfam Glutamine amidotransferase domain 164 281 IPR017932 -
Bhi10g01929 576 Hamap Amidophosphoribosyltransferase [purF]. 83 524 IPR005854 GO:0004044|GO:0009113
Bhi10g01929 576 CDD PRTases_typeI 346 457 IPR000836 -
Bhi10g01929 576 CDD GPATase_N 84 334 IPR035584 -
Bhi10g01929 576 SUPERFAMILY PRTase-like 319 530 IPR029057 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01929 K00764 purF, PPAT; amidophosphoribosyltransferase [EC:2.4.2.14] - csv:101203840 1036.94
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00900 Bhi-Chr6:23883381 Bhi10g01929 Bhi-Chr10:48149806 3.07E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g59 Blo02g00658 . . Bda08g00971 . . Bma05g00406 . . . Cma02g00358 Cma20g00802 Car02g00225 Car20g00687 . . . . . . . . . . . . . . . . . Cone12ag1199 Cone8ag1246 Cone3ag1203 . Lsi10g00425 . Chy11g00327 . . . . . . . . . Sed01g0252 Cmo02g00360 Cmo20g00810 . . . . Cpe16g00281 Cpe05g01298 Bhi10g01929 Tan05g1228 Cmetu11g1361 . Hepe08g0964 . . . . . . . . . . Csa02g01318 . Cme11g00452
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi04g00941 . 33 188 PRT Gene Family AT1G80050 79.5 3.9e-66 248.4
Bhi11g00216 . 30 180 PRT Gene Family AT1G80050 76.2 1.2e-62 236.9
Bhi12g00418 . 30 180 PRT Gene Family AT1G80050 74.8 1.3e-61 233.4
Bhi12g00417 . 30 183 PRT Gene Family AT1G80050 73.4 5.4e-60 228.0
Bhi04g00409 . 105 254 PRT Gene Family AT1G80050 72.0 5.6e-57 218.0
Bhi11g00215 . 30 148 PRT Gene Family AT1G80050 75.6 5.3e-47 184.9
Bhi04g00941 . 1 148 PRT Gene Family AT5G11160 80.4 5.5e-63 238.0
Bhi12g00418 . 8 145 PRT Gene Family AT5G11160 74.6 4.2e-55 211.8
Bhi04g00409 . 83 220 PRT Gene Family AT5G11160 72.5 1.4e-53 206.8
Bhi12g00417 . 8 148 PRT Gene Family AT5G11160 73.0 1.8e-53 206.5
Bhi11g00216 . 8 145 PRT Gene Family AT5G11160 71.7 5.7e-52 201.4
Bhi11g00215 . 8 145 PRT Gene Family AT5G11160 71.7 5.7e-52 201.4
Bhi04g00409 . 76 256 PRT Gene Family AT1G27450 82.3 2.4e-80 295.8
Bhi12g00418 . 7 180 PRT Gene Family AT1G27450 74.1 1.9e-72 269.6
Bhi11g00216 . 1 180 PRT Gene Family AT1G27450 72.2 1.6e-71 266.5
Bhi12g00417 . 7 183 PRT Gene Family AT1G27450 72.9 7.8e-71 264.2
Bhi04g00941 . 11 183 PRT Gene Family AT1G27450 69.4 2.0e-66 249.6
Bhi11g00215 . 1 146 PRT Gene Family AT1G27450 74.7 2.0e-58 223.0
Bhi10g01929 . 68 557 PRT Gene Family AT2G16570 84.8 5.8e-242 834.3
Bhi10g01929 . 64 557 PRT Gene Family AT4G34740 84.4 5.2e-243 837.8
Bhi10g01929 . 28 530 PRT Gene Family AT4G38880 70.8 8.9e-200 694.1
Bhi04g00409 . 76 256 PRT Gene Family AT1G27450 82.3 2.4e-80 295.8
Bhi12g00418 . 7 180 PRT Gene Family AT1G27450 74.1 1.9e-72 269.6
Bhi11g00216 . 1 180 PRT Gene Family AT1G27450 72.2 1.6e-71 266.5
Bhi12g00417 . 7 183 PRT Gene Family AT1G27450 72.9 7.8e-71 264.2
Bhi04g00941 . 11 183 PRT Gene Family AT1G27450 69.4 2.0e-66 249.6
Bhi11g00215 . 1 146 PRT Gene Family AT1G27450 74.7 2.0e-58 223.0
Bhi04g00941 . 33 188 PRT Gene Family AT1G80050 79.5 3.9e-66 248.4
Bhi11g00216 . 30 180 PRT Gene Family AT1G80050 76.2 1.2e-62 236.9
Bhi12g00418 . 30 180 PRT Gene Family AT1G80050 74.8 1.3e-61 233.4
Bhi12g00417 . 30 183 PRT Gene Family AT1G80050 73.4 5.4e-60 228.0
Bhi04g00409 . 105 254 PRT Gene Family AT1G80050 72.0 5.6e-57 218.0
Bhi11g00215 . 30 148 PRT Gene Family AT1G80050 75.6 5.3e-47 184.9
Bhi11g00216 . 5 97 PRT Gene Family AT4G22570 87.1 4.7e-44 174.5
Bhi11g00215 . 5 97 PRT Gene Family AT4G22570 87.1 4.7e-44 174.5
Bhi12g00418 . 6 104 PRT Gene Family AT4G22570 82.8 8.0e-44 173.7
Bhi12g00417 . 6 107 PRT Gene Family AT4G22570 80.4 3.4e-42 168.3
Bhi04g00409 . 80 172 PRT Gene Family AT4G22570 81.7 9.2e-40 160.2
Bhi04g00941 . 11 100 PRT Gene Family AT4G22570 78.9 3.3e-37 151.8
Bhi11g00216 . 1 96 PRT Gene Family AT4G12440 84.4 7.6e-41 163.7
Bhi11g00215 . 1 96 PRT Gene Family AT4G12440 84.4 7.6e-41 163.7
Bhi12g00418 . 1 96 PRT Gene Family AT4G12440 84.4 1.3e-40 162.9
Bhi12g00417 . 1 99 PRT Gene Family AT4G12440 81.8 5.4e-39 157.5
Bhi04g00409 . 76 171 PRT Gene Family AT4G12440 79.2 7.9e-38 153.7
Bhi04g00941 . 4 99 PRT Gene Family AT4G12440 78.1 5.1e-37 151.0
Bhi04g00941 . 1 148 PRT Gene Family AT5G11160 80.4 5.5e-63 238.0
Bhi12g00418 . 8 145 PRT Gene Family AT5G11160 74.6 4.2e-55 211.8
Bhi04g00409 . 83 220 PRT Gene Family AT5G11160 72.5 1.4e-53 206.8
Bhi12g00417 . 8 148 PRT Gene Family AT5G11160 73.0 1.8e-53 206.5
Bhi11g00216 . 8 145 PRT Gene Family AT5G11160 71.7 5.7e-52 201.4
Bhi11g00215 . 8 145 PRT Gene Family AT5G11160 71.7 5.7e-52 201.4
Bhi04g01588 . 1 186 PRT Gene Family AT1G71750 64.5 6.1e-69 258.1
Bhi09g01823 . 23 475 PRT Gene Family AT1G55810 85.5 4.0e-225 778.1
Bhi01g01902 . 19 482 PRT Gene Family AT1G55810 73.5 1.7e-199 693.0
Bhi09g01823 . 72 488 PRT Gene Family AT3G27440 74.9 1.6e-183 639.8
Bhi01g01902 . 80 482 PRT Gene Family AT3G27440 75.4 1.8e-179 626.3
Bhi01g01902 . 1 482 PRT Gene Family AT3G27190 86.1 3.9e-247 851.3
Bhi09g01823 . 11 474 PRT Gene Family AT3G27190 73.9 2.6e-206 715.7
Bhi03g02043 . 3 288 PRT Gene Family AT3G53900 67.7 6.4e-107 384.8
Bhi03g02042 . 3 293 PRT Gene Family AT3G53900 66.6 4.6e-105 378.6
Bhi03g02045 . 6 228 PRT Gene Family AT3G53900 77.6 1.3e-102 370.5
Bhi03g02044 . 6 233 PRT Gene Family AT3G53900 75.9 9.0e-101 364.4
Bhi09g01823 . 8 475 PRT Gene Family AT4G26510 83.9 1.9e-230 795.8
Bhi01g01902 . 11 482 PRT Gene Family AT4G26510 75.2 1.1e-209 726.9
Bhi01g01902 . 1 482 PRT Gene Family AT5G40870 86.7 2.3e-247 852.0
Bhi09g01823 . 10 477 PRT Gene Family AT5G40870 73.0 1.7e-205 713.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005155 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 40