Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01965 GGAGGAGGAGGAGGATGTGTTGCAGCAAATAACCAGACCTTCCATGCTCATGGGATGAGAGAGAAAATATAGGGTTTAGAGAGAGAAAAGGGTTTTTTGAGGTTTAAGAAGAAGAAGAAAGAAGAAGAAGAAAGAAGAAAGAAGAAAGAAGAAAGAAGAAGAAGCTGTAGGTCCACCAACTGGTAGTTAGAGATTAAGCTTCTTAACCAAACACACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAGGCATTTGATTTCTTTTCAACTGGGTTTCTTCAAAATTAGTGAATAAAAGCAGCCATAGCCACGAAAAGAGAGGTCTCTTTTCCTTTGGGGGGTGGAAGAAAAAGAAGAGAAGGAGAAATAAAGAGGAATTTAAAGTCATCATTTAGAGAGAGAGAAAGAAAGAAAGAAAGAAAAATCAAAGAAGAAAAAGAAATGGGTGTTACTCTCACGTGGGAATTGATGCAAATTATAGATAAGAATTGTGACAACACCACTTTATTTCGTCAAGGTAGAATCCGAAAAGTTCTGAATTGAGAGGAAAAATCTATGGCAACTTACTACTCTAGTTCAAATAACGAAAGGGACACTACACCCATCCTCTATTCAAGGGGATCTTTGCTGGGTTCGTATGAAGAAACAACAATTCTTCCACGGAATATGATGATGCATGTAAATTCTGGGACATACATGGATTCATTGCCTTCGCAGGCACAAAATGGTTGTGGCCAGATAACGTCTGTTGGAGCAGCGGGAACTGCCCAACAGCAGCAAGAGTTTTTATCGAATCTTGGTGGTTCGCAAATTGCTGAGCATGATTTCAATACATGGAGAGAGGACCGAAGTGAAATGCTTGGCACGAACTCGATGCGTGGCCCTACCAATGTTCTTCATGGTGGGCAGAATTTGCAGGGTCAGGGGTTATCCCTTACTCTCAGTACACAAATCCCATCTGCAATCCAAATTCCTTCAATCCCCTACAGAAATTCGGATATGGGTTTAACTTCATTCCTGAGTCCTAATCCTACTAATTCAGGTGAGGATGGCTGCAGAAATGGCGCTTCTAGAGACGAACAATTGAGAAATGGAGCTAATTTGCCACCTAATTTTCAAGAATTGGCTAAGGGTGAATTATCTCAATACAGCATGTCTAGTATTGCAAGAACTATGCCCAATTCAAAGTACCTCAAGGCAGCTCAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCCAATAACGAGAGAAACCAGAGTTCACATGAGCATGAAACTAGAAGTGCAAAGAATGGTGATGCAGGAACCAAGAATGACAGTTCGATGCTAACTGTAAGCGGAGCATCTTCAAACCCTCAAGAAACAGGGAGCAATTCAACATGTGAGCTCTCACATGCCGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTATACATGTTGGATGAGGTTGATAGAAGGTACAATCAATATTATCATCAGATGCAGATTGTGGTGTCATCGTTTGATGTGATAGCCGGATGTGGGGCATCTAAGCCATATACTGCACTTGCACTCCAGACTATATCCCGTCATTTTCGGTGCTTGCGAGATGCAATAGCTGGTCATGTTAGAGCTACCCGTAAAAGCCTAGGAGAGCATGAGAATTCTGGAAATGACAAAGGAGTTGGAATCACTCGTCTCCGGTATGTGGACCAGCAGTTAAGGCAACAGAGAGCTCTTCAGCAACTTGGTATGATACAGCAGCATGCTTGGAGGCCTCAAAGGGGGCTGCCTGAGAACTCTGTTTCAATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCCGATAAGATCATGCTGGCAAGGCAGACAGGCTTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGGAGTGTCGATATGGACTCTATATCATCATCTGAAAATGCTGGCAAGGCAGGAAAAGGAGATAACAAGACCTTTGAGGATGATAAAGAGGAGGATCTGCAACAAAGTGCAAGCTCAACAGCCACCGAAAGATGTAGCGCTGGAGATATTATTGACTTAAAATCTGATCAAGTCTCTAATCTCGGAAATTCAGGTTCCAACAGATTAGCTAGTTTCCAAAATGGTGCTCACATTGAAGCCCGAAACGAGCTGGTAAAGCCAGATGAGGAGTTAAGGCCTAATGTAAATAACTCGAGTTTCTTTCCTGATGCAATTGTCCACTCTCAGGGAGAGAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAATTGGGAAGGTTTGGGACGGTTGGCGGGGTATCGCTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGCATACCTATGCCTACAGGGACACATCATGGTTTTGCAGCCATGAGAGGAGATGATATGTACAATGCCGCAGCGTCTTCTCTCGGGGAAACGGTGCATTTTGAATGCGTAAATAGTGGGAATCCGCAACCGAGGTTTGGTCCTTCCCATCTTTATCATGATTTTGTTGTGTAAAACTGCAACTGTACAAGATTGGTGATCTACATCATATACTGGATGATATGTACACCACTGGGAGGAGCAAAGGAACGTGGGGTTTTTCTGCATTAGAACAATAGGTTGTTCCTTATAGCATTTCCTTGCTTGCAAGATGATATAAGAATGATTTTTTGTCCTCCATATGTGATATATATATATATGGAAACAGCAAAAAACATATTTGTAATATATCATGTAGTTGATTGGAAGGTTAGTTATATTTTTCTTGTCTGGGTGGTTGTCTGCATATGATTCAATTAGTGTTAAAACTTTGGTTTCCACAGAAATTATGAGCTCTTGAATAAATGTGACGTTATTTTAGATGAATAAA 2966 41.87 MATYYSSSNNERDTTPILYSRGSLLGSYEETTILPRNMMMHVNSGTYMDSLPSQAQNGCGQITSVGAAGTAQQQQEFLSNLGGSQIAEHDFNTWREDRSEMLGTNSMRGPTNVLHGGQNLQGQGLSLTLSTQIPSAIQIPSIPYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDEQLRNGANLPPNFQELAKGELSQYSMSSIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERNQSSHEHETRSAKNGDAGTKNDSSMLTVSGASSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGHVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENAGKAGKGDNKTFEDDKEEDLQQSASSTATERCSAGDIIDLKSDQVSNLGNSGSNRLASFQNGAHIEARNELVKPDEELRPNVNNSSFFPDAIVHSQGESDRFMAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGIPMPTGTHHGFAAMRGDDMYNAAASSLGETVHFECVNSGNPQPRFGPSHLYHDFVV 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 48974683 48979435 + XM_039045052.1 Bhi10g01965 48306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01965 681 ProSiteProfiles 'Homeobox' domain profile. 403 466 IPR001356 GO:0003677
Bhi10g01965 681 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 70 632 - -
Bhi10g01965 681 MobiDBLite consensus disorder prediction 153 167 - -
Bhi10g01965 681 Gene3D - 401 479 - -
Bhi10g01965 681 MobiDBLite consensus disorder prediction 231 285 - -
Bhi10g01965 681 MobiDBLite consensus disorder prediction 153 187 - -
Bhi10g01965 681 Pfam Associated with HOX 208 355 IPR006563 -
Bhi10g01965 681 SMART HOX_1 406 470 IPR001356 GO:0003677
Bhi10g01965 681 SUPERFAMILY Homeodomain-like 407 474 IPR009057 -
Bhi10g01965 681 MobiDBLite consensus disorder prediction 495 510 - -
Bhi10g01965 681 SMART prehox3 201 356 IPR006563 -
Bhi10g01965 681 CDD homeodomain 406 467 IPR001356 GO:0003677
Bhi10g01965 681 MobiDBLite consensus disorder prediction 483 520 - -
Bhi10g01965 681 MobiDBLite consensus disorder prediction 253 285 - -
Bhi10g01965 681 MobiDBLite consensus disorder prediction 231 252 - -
Bhi10g01965 681 Pfam Homeobox KN domain 423 462 IPR008422 GO:0003677|GO:0006355
Bhi10g01965 681 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 70 632 - -
Bhi10g01965 681 Coils Coil 288 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00037 Bhi-Chr9:606672 Bhi10g01965 Bhi-Chr10:48974683 1.34E-106 dispersed
Bhi10g01965 Bhi-Chr10:48974683 Bhi11g02375 Bhi-Chr11:64704119 2.42E-106 dispersed
Bhi12g00295 Bhi-Chr12:8561478 Bhi10g01965 Bhi-Chr10:48974683 1.02E-72 dispersed
Bhi10g01965 Bhi-Chr10:48974683 Bhi10g01966 Bhi-Chr10:48974685 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2242 PF07526 POX 4.40E-51 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01965 - - csv:101205137 1290.79