Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01969 AACACCCAACGAAGAATTAAAATTAAAAGAAAATGGAAAAGAAAAATATGGCGAAAGCTTCAGAGTTGAGAGAGTTCAATGCTGACTTCTTTTTATATGTCTTTTCCATTTAGTATTTGGCGCTTCCTTCAGCCGCCCTTCCTTGCGAGAACCCCATTTGTGCGATTTTTTTATAATTTTTTTTCCCACTACTATACCCGTTCGATTCTTCCCAATCCCAGATTCTACACCCAAATCCCCAAAACCCCTTGTAAGTTTATGGTCTTCCTCACTTGTTTGCGTCTTCTCTGAGTCAATTCCCACTTCCAATGGCTTCCCAGCAGCAGTTATCCGCCATTAAGGGCGCTAAAGTGCTGATGGTTGGTGCGGGGGGGATCGGCTGCGAGCTTCTCAAGACTTTGGCTCTCTCGGGGTTTCAGGACATTCATATTATTGACATGGACACCATAGAAGTGAGCAACTTAAACCGACAATTTTTATTCAGAAAATCCCATGTAGGGCTATCAAAGGCTAAGGTTGCTCGGGATGCTGTCTTAAGATTCAGACCTCATGTTAGCATTACCTCATATCATGCAAATGTCAAGAATCAAGAATTTAATGTAGATTTTTTTAAGCAATTTAGTGTTGTTTTGAATGGACTCGACAACTTAGATGCAAGGCGTCATGTGAATCGTTTGTGCTTGGCAGCTGATGTTCCCTTAGTTGAAAGTGGAACCACTGGATTCCTTGGACAGGTCACAGTCCATGTCAAGGGAAAAACAGAATGCTACGAGTGCCAGCCAAAACCGGCCCCAAAAACATATCCTGTCTGTACCATTACTAGTACTCCGTCAAAGTTTGTTCACTGCATCGTTTGGGCGAAAGATCTACTTTTTGCGAAGTTATTTGGAGATAAGAATCAAGAAAATGATCTAAATGTGCGTTCAAGTGATCCTGCAAGTTCATCAGATCATGCTGAAGATATATTTGAACTTAGCAAGGACGAAACTATTGAGCACTATGGAAGAAGAGTATTTGATCATGTATTTGGGTACAATATTGAAGTAGCTTTATCTAATGAAGACACTTGGAAAAATCGCAATAAACCTAGGCCTATTTATAGTAGGGATATCTTTCCTGACGAACCAACTAAACAGAATGGAAATGCAGACAAAAACTGTGCAACTGATGGCCAATCCTCAATTTCTGCTATGACATCTCTAGGCATAAAAAATCCCCAGGAGATATGGAGTCTTATGGAAAACTCCAGAATCTTCGTTGAGGCTCTTAAACTTTTTTTCACGAAAAGGGAAAAGGATGTTGGGAACTTGGCTTTTGATAAAGATGATCAGTTAGCTGTGGAATTTGTCACTGCTGCTGCAAACATTAGAGCTGAATCTTTTGGTATTCCAATGCATAGCCTTTTTGAATCTAAAGGCATTGCCGGTAACATTGTTCATGCCGTTGCAACAACCAATGCAATAATTGCTGGGTTGATTGTGATTGAGGCAATTAAGGTGCTGCAAAATGATGCAAACAATTACAGGATGACATATTGTCTTGAACATCCTTCAAGGAAGATGCTTCTAATGCCAGTGGAACCTTTTGAGCCTAATAAATCCTGCTATGTTTGCTCTGAGACACCGCTATCACTCGAGATAAATACGCATCGTGCAAAGCTGCGAGATTTTGTTGAGAAGATAGTCAAGGCCAAGCTTGGGATGAACTTTCCACTTATTATGCATGGAGCTGCCCTTCTTTATGAAGTTGGCGATGATCTTGATGAGGACATGGTGGCAAACTATACTGCAAACCTTGAGAAGGTACTGTCGGAACTTCCTTCACCTGTTGTTAGTGGGACTATATTATCGGTTGAGGATCTCCAACAAGAGCTTAGCTGCAGTATCAACATCAAACATAGAGATGAATTTGATGAGGAGAAGGAACCAGATGGTATGGTTCTATCTGGATGGCAGCAGACTTCACTGGAAAAGGGTGATACCAGCAATACTTTGGGCAATGGAGAAAGCACCTCAAAATCGTTGTCCTCTGCGATGGATGCTGATAAGAATGACGACTCAGACATTGTTGCATCTGGAAGAAAAAGAAAACTGGATGAGGCATCTTCGGCTGTCGATATATCAATTGAAGCTAATAGCTCGAAGAAACCTGAAGTGCTTGATGACGACGACGACGACGACCTTGTCATGCTTGATGATGGGGACTCAGCTATCAACAAGAAGAAAAGATTGCAATAATTGCTTCTTGGATTTAACGGAGGAATGCTAACCTAATTTTGTTCTGTTAGGAAGAAATGGTGATTCTTTAGGTGCTTCATAATTTTTCTTAGATCTTATGTGTAATCCTTTTTGGAGTTAGGCGCATCAATTGGTCTCTCCTTGCCCCATCTTGTGAGTTCAGATGTAGCAGAATGTTGTTATATTTCCAAGCATCAAATTTAGAAGCTAGAGTGATTGTAACACTAAACAGAAGTCTCAACCTTTTGGAAACTTATACTATCTTATGACAGTAATCAATCAAAAATATATTTTCAACAA 2537 40.36 MASQQQLSAIKGAKVLMVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRKSHVGLSKAKVARDAVLRFRPHVSITSYHANVKNQEFNVDFFKQFSVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDPASSSDHAEDIFELSKDETIEHYGRRVFDHVFGYNIEVALSNEDTWKNRNKPRPIYSRDIFPDEPTKQNGNADKNCATDGQSSISAMTSLGIKNPQEIWSLMENSRIFVEALKLFFTKREKDVGNLAFDKDDQLAVEFVTAAANIRAESFGIPMHSLFESKGIAGNIVHAVATTNAIIAGLIVIEAIKVLQNDANNYRMTYCLEHPSRKMLLMPVEPFEPNKSCYVCSETPLSLEINTHRAKLRDFVEKIVKAKLGMNFPLIMHGAALLYEVGDDLDEDMVANYTANLEKVLSELPSPVVSGTILSVEDLQQELSCSINIKHRDEFDEEKEPDGMVLSGWQQTSLEKGDTSNTLGNGESTSKSLSSAMDADKNDDSDIVASGRKRKLDEASSAVDISIEANSSKKPEVLDDDDDDDLVMLDDGDSAINKKKRLQ 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 49027716 49036038 + XM_039044388.1 Bhi10g01969 48310

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01969 642 MobiDBLite consensus disorder prediction 576 600 - -
Bhi10g01969 642 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 442 534 IPR028077 -
Bhi10g01969 642 MobiDBLite consensus disorder prediction 552 642 - -
Bhi10g01969 642 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 163 374 IPR023318 -
Bhi10g01969 642 Gene3D - 436 629 - -
Bhi10g01969 642 Pfam Ubiquitin-activating enzyme, SCCH domain 317 369 IPR019572 -
Bhi10g01969 642 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 556 IPR045886 -
Bhi10g01969 642 MobiDBLite consensus disorder prediction 552 575 - -
Bhi10g01969 642 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 1 556 - -
Bhi10g01969 642 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 492 IPR035985 GO:0008641
Bhi10g01969 642 CDD Uba2_SUMO 14 435 - -
Bhi10g01969 642 Gene3D - 1 108 IPR042449 -
Bhi10g01969 642 MobiDBLite consensus disorder prediction 264 283 - -
Bhi10g01969 642 Pfam ThiF family 5 433 IPR000594 -
Bhi10g01969 642 PIRSF SUMO_E1B 1 623 IPR030661 GO:0016925|GO:0019948
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01969 K10685 UBLE1B, SAE2, UBA2; ubiquitin-like 1-activating enzyme E1 B [EC:6.2.1.45] - csv:101205378 1190.25
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00848 Bhi-Chr1:16034897 Bhi10g01969 Bhi-Chr10:49027716 8.07E-09 dispersed
Bhi08g01488 Bhi-Chr8:43260958 Bhi10g01969 Bhi-Chr10:49027716 8.62E-15 dispersed
Bhi10g00841 Bhi-Chr10:16989344 Bhi10g01969 Bhi-Chr10:49027716 6.62E-07 dispersed
Bhi10g00842 Bhi-Chr10:16989344 Bhi10g01969 Bhi-Chr10:49027716 9.74E-42 dispersed
Bhi10g01969 Bhi-Chr10:49027716 Bhi11g00589 Bhi-Chr11:13437136 2.28E-18 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g336 Blo02g00838 Blo15g00710 . Bda08g00946 Bpe07g00415 . Bma05g00435 Bma12g00496 . . Cma02g00376 Cma20g00825 Car02g00243 Car20g00711 . . . . . . . . . . . . . . . . . . . . . Lsi10g00399 . Chy11g00352 . . . . . . . . . Sed01g0281 Cmo02g00383 Cmo20g00836 . . . . Cpe16g00263 Cpe05g01278 Bhi10g01969 Tan05g1264 Cmetu11g1045 . Hepe08g0992 . . . . . . . . . . Csa02g01289 . Cme11g00143
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004157 1 1 2 4 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 3 1 44