Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g01996 ACAACGAAAAAGTAGGATCATCTTCTTAGTTCTTTCCATTTGCAAGTCACCGTTACAGCTCCGATCAGGTTTTGTTCGCCGGAAACCATGCCTCAGCAGCCCAAGGTTCTCATCATCGGTGGGACTGGTTACATCGGAAAATTTTTAGTAGAAGCCAGCGCCAAAGCAGGTCATCCAACTTGTGCATTGGTCCGCGAATCTACGCTCGCTGACTCCGGCAAGTCTTCGATCATCGATAATTTCAGGAGCTTGGGTGTCAATCTCGTTACCGGCGATATCTTCGACAATGAGAGTCTGGTTAGGGCAATACAGCAGGTTGATGTGGTGATATCCACCGTTAGTCGTGCTTTGTTATCCCATCAAGATAAGATCATATCTGCCATCAAACAAGCTGGTAATGTTAAGAGATTTTTTCCCTCGGAGTTTGGCAACGATGTAGATCGTGTTCACGCTGTGGAGCCTGCAAAACGGATGTTTGCTGCTAAGGCTGAAATTCGTAGGGCTATAGAAGCAGAGGGAATCCCCCATACATTTGTTGTTAGCAATTTCTTTGGTGGCTACCATCTTCGCAACTTCTCTCAACCAGGAGCCACAGACCCACCTAGAGACAAAATTAAAATCTTAGGGGATGGAAGTCCCAAAGTGGTTTACAACAAGGAAGAAGATATTGGGACGTACACCATCCGAGCCATAGATGATCCAAGAACCCTCAACAAGATCTTGTACATTAGACCTCCTGCTAACATCTACTCGACTAATGATCTAGTCTCACTGTGGGAGAAAAAAATTGGCAACAGTCTTGAAAGGACCTACGTCTCAGAGGAGGAGCTTGTGAAGAACATCCAAGAGACTCCATTTCCACTGAATACAGGATTAGCAATTAGTCACAGTGCTTTTGTGAAGGGAGATCATACCAACTTTGATATTGAACCAGCAGTTGGAGTAGAAGCTTCAGAGCTGTATCCAGATGTTCAATACACAACTGTGGAAGAATATCTCAACCAATTTGTTTAGAAATGCCCACCCACCCTCAAACCAATTTGATCTTTACTTTGTTTAATACAGCAGCTCTGCCCTTCATATTTGTATAATGCAAAAATGATGAAAACAGAGGCTTTTGTAGATAGCCTCAGGTTTTTTTTCTTTTGCAGACTAATTCTGAAATAATCTCGTCTTTGATTCACTTCA 1188 43.18 MPQQPKVLIIGGTGYIGKFLVEASAKAGHPTCALVRESTLADSGKSSIIDNFRSLGVNLVTGDIFDNESLVRAIQQVDVVISTVSRALLSHQDKIISAIKQAGNVKRFFPSEFGNDVDRVHAVEPAKRMFAAKAEIRRAIEAEGIPHTFVVSNFFGGYHLRNFSQPGATDPPRDKIKILGDGSPKVVYNKEEDIGTYTIRAIDDPRTLNKILYIRPPANIYSTNDLVSLWEKKIGNSLERTYVSEEELVKNIQETPFPLNTGLAISHSAFVKGDHTNFDIEPAVGVEASELYPDVQYTTVEEYLNQFV 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 49889829 49892305 - XM_039044822.1 Bhi10g01996 48337

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g01996 308 Gene3D - 154 304 - -
Bhi10g01996 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 278 IPR036291 -
Bhi10g01996 308 PANTHER PINORESINOL REDUCTASE-RELATED 3 308 - -
Bhi10g01996 308 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 3 308 - -
Bhi10g01996 308 Gene3D - 6 294 - -
Bhi10g01996 308 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
Bhi10g01996 308 Pfam NmrA-like family 7 243 IPR008030 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g01996 K23050 PCBER1; phenylcoumaran benzylic ether reductase [EC:1.3.1.-] - csv:101210299 528.48
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi05g01245 Bhi10g01996 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01245 Bhi-Chr5:45189667 Bhi10g01996 Bhi-Chr10:49889829 3.39E-159 dispersed
Bhi05g01246 Bhi-Chr5:45261297 Bhi10g01996 Bhi-Chr10:49889829 2.83E-147 dispersed
Bhi10g01996 Bhi-Chr10:49889829 Bhi10g01998 Bhi-Chr10:49941421 6.33E-172 dispersed
Bhi10g01996 Bhi-Chr10:49889829 Bhi10g01997 Bhi-Chr10:49920499 2.58E-173 tandem
Bhi04g00181 Bhi-Chr4:4347841 Bhi10g01996 Bhi-Chr10:49889829 2.96E-153 transposed
Bhi05g01005 Bhi-Chr5:35526015 Bhi10g01996 Bhi-Chr10:49889829 2.93E-166 transposed
Bhi10g01996 Bhi-Chr10:49889829 Bhi05g01241 Bhi-Chr5:44857234 3.67E-148 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g367 . . . . . . . . . . Cma02g00392 Cma20g00844 Car02g00255 Car20g00731 . . . Bhi05g01245 Tan02g0784 Cmetu01g1772 . . . . . . . . . . . . . . . Lsi10g00378 . . . . . . . . . . . Sed01g0298 Cmo02g00399 Cmo20g00855 . . . . . . Bhi10g01996 Tan05g1294 Cmetu11g1946 . . . . . . . . . . . . Csa02g01267 . Cme11g00123
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000111 5 10 6 7 3 10 5 11 9 7 10 9 5 7 11 5 9 5 6 10 8 9 7 8 12 9 8 7 9 7 234