Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02007 TTTTCCCCTTAATTTATTTCTTCTTTCTCACATTATTTATATATCTCTTCTCTTCTTTTTACTTTCATTCAACAACAACAAAAACCACAACGTTACTAAACACAATATTAACTCTTTTGGGCTGCCGGCCGGAGACATGTTCAAGTCGGAGATGACGGTGTCGGCTCGACTCAAACGGCGGCGACACCGCGGAAATTGCCAGAGCTTGTCTTCCGTCTCAGTTCCGGCAAGTCGGGTCGACCATTTCGAGGATCTAGTTAGACCCGGAGGTTTGTCCGAGTTGGCTAAGTACGAGATCTCCTCTACGGAATTTCGAATTAATATGATGTGTTCGCCCCTAGTAGAGGTGATGGCGAACTCCATGGTCGAGGGAGAGATTTCGAGAAAGAGAAAAGGCAAGAACAAGGAAACAAAATCGAAAGTGAGAAATGATAATAATAATAATAATGTTGACAGGGAGGATGGGAAAAGAACAGAGAAGAAAATGAAAGAGAAAGTTGAAGAAGATGAAGATGAATCAAAGATTACAGAGGAAACAGAGAGATGGAAAAAACATAATTCAAAAGCTTTAGAAGAAGTTCAAAAATCAGAATATGTTCATGTCAGAGCACGTCGAGGCCAAGCCACAGACAGCCATAGTCTTGCAGAAAGAGCAAGGAGAGAAAAGATAAGTGAAAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTTCAGCAACAAGTTGAGTTCTTATCAAGGAAGGTGGCTGCTCTAAATCATAGAGTTGATTTTATCAATGTAGATGACCTCTTGGCCAAACAGGTGTTTCCAACGATAACAGCTGATTGTTCATCCTACTTTAATCAACTTGGAATGGGCTCAAGCTCTCTAACAGTCCCACAAACTCCATTGATCAATAACAACCTATCTTCAATTACTCATTTTGAACTTTCTTCAACTTGGGGAGGTGATTTACAGAGGTTTGAAGAATTAGGAGGGCCGCCATTGTTGTCGCCATCAAGCTTTTTATCGCAACAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTATGGACCACAAAGTTGTTCCATTTTAACGTTTAATTATTATTGCAGATATTCAAAATAAAAAAAAAAAATAATAATAAATAATGTCTTATGATGGAAATTCACTAAATTGTAGGTTGGTGTTACTATTGAATATATTCAATTTCATATGGATTTGGTATTTTTCAATA 1282 37.52 MFKSEMTVSARLKRRRHRGNCQSLSSVSVPASRVDHFEDLVRPGGLSELAKYEISSTEFRINMMCSPLVEVMANSMVEGEISRKRKGKNKETKSKVRNDNNNNNVDREDGKRTEKKMKEKVEEDEDESKITEETERWKKHNSKALEEVQKSEYVHVRARRGQATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSRKVAALNHRVDFINVDDLLAKQVFPTITADCSSYFNQLGMGSSSLTVPQTPLINNNLSSITHFELSSTWGGDLQRFEELGGPPLLSPSSFLSQQCSGIEDENETLFMDHKVVPF 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50176855 50181534 - XM_039046034.1 Bhi10g02007 48348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02007 334 MobiDBLite consensus disorder prediction 1 24 - -
Bhi10g02007 334 Coils Coil 107 134 - -
Bhi10g02007 334 CDD bHLH_AtBPE_like 152 238 - -
Bhi10g02007 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 212 IPR011598 GO:0046983
Bhi10g02007 334 SMART finulus 168 218 IPR011598 GO:0046983
Bhi10g02007 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 232 IPR036638 GO:0046983
Bhi10g02007 334 Gene3D - 159 234 IPR036638 GO:0046983
Bhi10g02007 334 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 6 327 IPR024097 GO:0006355
Bhi10g02007 334 PANTHER TRANSCRIPTION FACTOR BHLH74 6 327 - -
Bhi10g02007 334 MobiDBLite consensus disorder prediction 80 135 - -
Bhi10g02007 334 Coils Coil 202 229 - -
Bhi10g02007 334 Pfam Helix-loop-helix DNA-binding domain 166 213 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01240 Bhi10g02007 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02007 Bhi-Chr10:50176855 Bhi10g02009 Bhi-Chr10:50176855 0 dispersed
Bhi10g02007 Bhi-Chr10:50176855 Bhi10g02008 Bhi-Chr10:50176855 0 tandem
Bhi10g02007 Bhi-Chr10:50176855 Bhi05g01240 Bhi-Chr5:44812916 1.61E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2247 PF00010 HLH 2.60E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02007 - - csv:101216346 436.802