Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02043 ATATTTATATTTTACTTATTTCATCGGAAGAGCTCCCACCATTTAGTCGTTGTCCTTTCACTCTCCTCGCCGGAATTTCCAACGATCTTCCCGGAGGGAAACGTTCTCCGGCGTTTCCCGATTTCTCCGGATCCGATTTATTCATCGAATCTCGTTATCGATTGTTTTTGTTTCGCGTTTCTCTTTTCCCCCTTTTGGTATTACCCACTCACCTTTGCCTTTTTTCTTCTTTCCATCTGACTTCAATTTCTTCTTCTCTTTCCCCAATTCCCTTTCCCTATTTCTCAATGGACGACTGTTTAAGCAGCGATGAGGACTATTATGACTCCGATCGAGACTCTCTTCATGGTATTGAGAACGAGGACTCTGAAATTCAGTGGGTTCCTAAAGCTCCCGCGACTAAGGTTATTACGAAGGAATCTCTCCTTGCGGCACAGAAGGAGGACATGCGTAGAGTGATGGACTTGCTATCGTTGAGGGAATACCATGCTCGGACCTTACTCATTCATTACCGATGGGATGTAGAGAAATTGTTTGCAGTACTTGTGGAGAAAGGGAAAAGTCATTTGTTTGCTACAGCTGGTGTTAGTATGATTGAGAATCGAAGTAATAGTTCCTCTGAGCCTTCTTCCATGGTGATGTGTGATATCTGCATGGAGGAAGTACATGGCAATGATGCAACGAGAGTGGATTGTGATCATTGCTTTTGTAATAACTGTTGGACTGAACATTTCATTGTGAAAATAAACGAGGGTCAAAGTCGGAGAATCAGATGCATGGCCCACAAATGTAATGCGATTTGCGATGAAGCTGTTGTTAGGAATTTAGTTAGTAAAAGGCATCCAGATCTTGCTAATAAATTTGATCGTTTTCTTCTTGAGTCATACATTGAGGATAACAAAAGAGTCAAGTGGTGTCCGAGTACTCCTCATTGTGGCAATGCTATACGCGTGGAGGATGATGAGTTTTGTGAAGTAGAATGTTCGTGTGGTCTTCAGTTTTGTTTCAGTTGCTTATCAGAAGCTCACTCACCGTGTTCATGTTTGATGTGGGAACTTTGGATTAAGAAGTGTCGAGATGAATCTGAAACTGTTAACTGGATTACAGTACATACAAAGCCCTGCCCAAAATGCCATAAGCCTGTCGAGAAGAATGGAGGTTGTAACCTCGTCAGCTGCATCTGTGGTCAGGCATTTTGTTGGCTGTGTGGTGGAGCCACGGGTCGGGAGCACACTTGGTCGAGTATTTCTGGTCATAGTTGTGGGCGTTACAAAGAAGAATCAGAACAGAAAGCTGAGCGAGCAAAACGGGATTTGTATAGGTATATGCACTATCATAATCGGTACAAAGCTCATACAGATTCTTTTAAGCTTGAAAGCAAATTGAAGGAATCTATACAAGAGAAGATCTCAATTTCGGAAGAGAGGGAATCCATGCTCAGAGATTTTAGTTGGGTAAACAATGGACTGTCTAGACTTTTCAGATCAAGGCGGGTTCTATCTTACTCTTACCCATTTGCATTCTATATGTTTGGGGATGAGCTATTCAAAGATGAGATGACTGAGGCGGAAAGAGAGATAAAGCAGCATCTATTTGAGGACCAGCAACAGCAACTTGAGGCAAATGTTGAGAAGCTCTCCAAGTTTTTGGAGGAGCCATTCGATCAATATACTAAAGATAGGGTAATGGAGATACGGATGCAAGTCATCAATTTATCGGTTATCACTGATACCCTCTGCAAGAAGATGTATGACTGTATTGAGAATGATCTTCTGGGCTCTCTAGAACTGGGTATCCACAATATTGCTCCTTACAAGTCGAAGGGCATCGAGAAGGCACTGGAGCTTTCTGCTTGTTGGAACAGCAAAGCAAATACTTCAGACAAATATCCACCATCAGACTGTGGTACAAGTGGAGGATTGTCGGAATGCGAACGATTTTACTAGCTTGAATTCGAGGAGAATGGATGCTCTTCTAGGAAGCGTGCCAGAGCA 1994 42.63 MDDCLSSDEDYYDSDRDSLHGIENEDSEIQWVPKAPATKVITKESLLAAQKEDMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGKSHLFATAGVSMIENRSNSSSEPSSMVMCDICMEEVHGNDATRVDCDHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKRHPDLANKFDRFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEESEQKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKESIQEKISISEERESMLRDFSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEAEREIKQHLFEDQQQQLEANVEKLSKFLEEPFDQYTKDRVMEIRMQVINLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKSKGIEKALELSACWNSKANTSDKYPPSDCGTSGGLSECERFY 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51121725 51128732 - XM_039045332.1 Bhi10g02043 48384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02043 552 SMART ibrneu5 260 325 IPR002867 -
Bhi10g02043 552 SMART ibrneu5 190 252 IPR002867 -
Bhi10g02043 552 Pfam IBR domain, a half RING-finger domain 191 252 IPR002867 -
Bhi10g02043 552 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 507 IPR031127 GO:0004842|GO:0016567
Bhi10g02043 552 Gene3D - 248 496 - -
Bhi10g02043 552 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Bhi10g02043 552 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 204 IPR013083 -
Bhi10g02043 552 SUPERFAMILY RING/U-box 191 259 - -
Bhi10g02043 552 SUPERFAMILY RING/U-box 260 325 - -
Bhi10g02043 552 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
Bhi10g02043 552 SUPERFAMILY RING/U-box 114 202 - -
Bhi10g02043 552 Pfam Ariadne domain 329 548 IPR045840 -
Bhi10g02043 552 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 507 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00948 Bhi-Chr6:26085170 Bhi10g02043 Bhi-Chr10:51121725 2.98E-50 dispersed
Bhi06g00949 Bhi-Chr6:26088382 Bhi10g02043 Bhi-Chr10:51121725 4.17E-50 dispersed
Bhi10g02043 Bhi-Chr10:51121725 Bhi10g02046 Bhi-Chr10:51123466 0 dispersed
Bhi10g02043 Bhi-Chr10:51121725 Bhi10g02044 Bhi-Chr10:51123466 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02043 K11968 - csv:101205066 1085.09