Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02045 ATATTTATATTTTACTTATTTCATCGGAAGAGCTCCCACCATTTAGTCGTTGTCCTTTCACTCTCCTCGCCGGAATTTCCAACGATCTTCCCGGAGGGAAACGTTCTCCGGCGTTTCCCGATTTCTCCGGATCCGATTTATTCATCGAATCTCGTTATCGATTGTTTTTGTTTCGCGTTTCTCTTTTCCCCCTTTTGGTATTACCCACTCACCTTTGCCTTTTTTCTTCTTTCCATCTGACTTCAATTTCTTCTTCTCTTTCCCCAATTCCCTTTCCCTATTTCTCAATGGACGACTGTTTAAGCAGCGATGAGGACTATTATGACTCCGATCGAGACTCTCTTCATGGTATTGAGAACGAGGACTCTGAAATTCAGTGGGTTCCTAAAGCTCCCGCGACTAAGGTTATTACGAAGGAATCTCTCCTTGCGGCACAGAAGGAGGACATGCGTAGAGTGATGGACTTGCTATCGTTGAGGGAATACCATGCTCGGACCTTACTCATTCATTACCGATGGGATGTAGAGAAATTGTTTGCAGTACTTGTGGAGAAAGGGAAAAGTCATTTGTTTGCTACAGCTGGTGTTAGTATGATTGAGAATCGAAGTAATAGTTCCTCTGAGCCTTCTTCCATGGTGATGTGTGATATCTGCATGGAGGAAGTACATGGCAATGATGCAACGAGAGTGGATTGTGATCATTGCTTTTGTAATAACTGTTGGACTGAACATTTCATTGTGAAAATAAACGAGGGTCAAAGTCGGAGAATCAGATGCATGGCCCACAAATGTAATGCGATTTGCGATGAAGCTGTTGTTAGGAATTTAGTTAGTAAAAGGCATCCAGATCTTGCTAATAAATTTGATCGTTTTCTTCTTGAGTCATACATTGAGGATAACAAAAGAGTCAAGTGGTGTCCGAGTACTCCTCATTGTGGCAATGCTATACGCGTGGAGGATGATGAGTTTTGTGAAGTAGAATGTTCGTGTGGTCTTCAGTTTTGTTTCAGTTGCTTATCAGAAGCTCACTCACCGTGTTCATGTTTGATGTGGGAACTTTGGATTAAGAAGTGTCGAGATGAATCTGAAACTGTTAACTGGATTACAGTACATACAAAGCCCTGCCCAAAATGCCATAAGCCTGTCGAGAAGAATGGAGGTTGTAACCTCGTCAGCTGCATCTGTGGTCAGGCATTTTGTTGGCTGTGTGGTGGAGCCACGGGTCGGGAGCACACTTGGTCGAGTATTTCTGGTCATAGTTGTGGGCGTTACAAAGAAGAATCAGAACAGAAAGCTGAGCGAGCAAAACGGGATTTGTATAGGTATATGCACTATCATAATCGGTACAAAGCTCATACAGATTCTTTTAAGCTTGAAAGCAAATTGAAGGAATCTATACAAGAGAAGATCTCAATTTCGGAAGAGAGGGAATCCATGCTCAGAGATTTTAGTTGGGTAAACAATGGACTGTCTAGACTTTTCAGATCAAGGCGGGTTCTATCTTACTCTTACCCATTTGCATTCTATATGTTTGGGGATGAGCTATTCAAAGATGAGATGACTGAGGCGGAAAGAGAGATAAAGCAGCATCTATTTGAGGACCAGCAACAGCAACTTGAGGCAAATGTTGAGAAGCTCTCCAAGTTTTTGGAGGAGCCATTCGATCAATATACTAAAGATAGGGTAATGGAGATACGGATGCAAGTCATCAATTTATCGGTTATCACTGATACCCTCTGCAAGAAGATGTATGACTGTATTGAGAATGATCTTCTGGGCTCTCTAGAACTGGGTATCCACAATATTGCTCCTTACAAGTCGAAGGGCATCGAGAAGGCACTGGAGCTTTCTGCTTGTTGGAACAGCAAAGCAAATACTTCAGACAAATATCCACCATCAGACTGTGGTACAAGTGGTAAAGTGGAGGATTGTCGGAATGCGAACGATTGACTAGCTTGAATTCCGAGGAGAATGGATGCTCTTCTAGGAAGCGTGCCAGAGCAGAAGTTGTTACTGGCAACTTTTTTGATCTTAACTTGCCTGCTGAGGTTGTTGATAGAAACTGATCTCTGGAAGTTGCGTGGTTATAAAGTACAGTTGTACAGATCTGACATAAAACATTAGCTTCGTCGTTAGCATGGGGACAAGCAATCAAGGATTAGTAGCCCTAGAGGTGCTTTTTAACTCTTTTTTACTCTTTGTTCATCATGTTTCGTCTCAGGTTGAATATATTGTCTTCGGCTGAGCCTATATTTTGAAAGAGAATCTCTTTTAAGTTCACGTTCTTTATTTCCATTTTGCTTTTGAAAATCCGCAAATTGTACATAGCCGTGATGTCAGGCTTTGATGGTATTGGGAATGTAAATGCTTGATTCTCAGCCTGAGACAGACAACAGAGTATGCATTTTCTGATTGTCTAATATTTTCTTTGGCTGGAAGTAAAA 2443 41.71 MDDCLSSDEDYYDSDRDSLHGIENEDSEIQWVPKAPATKVITKESLLAAQKEDMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGKSHLFATAGVSMIENRSNSSSEPSSMVMCDICMEEVHGNDATRVDCDHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKRHPDLANKFDRFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEESEQKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKESIQEKISISEERESMLRDFSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEAEREIKQHLFEDQQQQLEANVEKLSKFLEEPFDQYTKDRVMEIRMQVINLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKSKGIEKALELSACWNSKANTSDKYPPSDCGTSGKVEDCRNAND 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51123466 51128732 - XM_039045331.1 Bhi10g02045 48386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02045 553 SMART ibrneu5 260 325 IPR002867 -
Bhi10g02045 553 SMART ibrneu5 190 252 IPR002867 -
Bhi10g02045 553 Pfam Ariadne domain 329 546 IPR045840 -
Bhi10g02045 553 Pfam IBR domain, a half RING-finger domain 191 252 IPR002867 -
Bhi10g02045 553 Gene3D - 248 496 - -
Bhi10g02045 553 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Bhi10g02045 553 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 204 IPR013083 -
Bhi10g02045 553 SUPERFAMILY RING/U-box 191 259 - -
Bhi10g02045 553 MobiDBLite consensus disorder prediction 529 553 - -
Bhi10g02045 553 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 508 - -
Bhi10g02045 553 SUPERFAMILY RING/U-box 260 325 - -
Bhi10g02045 553 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
Bhi10g02045 553 SUPERFAMILY RING/U-box 114 202 - -
Bhi10g02045 553 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 508 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02045 Bhi-Chr10:51123466 Bhi11g00841 Bhi-Chr11:23660744 7.95E-12 dispersed
Bhi10g02044 Bhi-Chr10:51123466 Bhi10g02045 Bhi-Chr10:51123466 0 tandem
Bhi10g02045 Bhi-Chr10:51123466 Bhi10g02046 Bhi-Chr10:51123466 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02045 K11968 - csv:101205066 1074.31