Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02046 ATATTTATATTTTACTTATTTCATCGGAAGAGCTCCCACCATTTAGTCGTTGTCCTTTCACTCTCCTCGCCGGAATTTCCAACGATCTTCCCGGAGGGAAACGTTCTCCGGCGTTTCCCGATTTCTCCGGATCCGATTTATTCATCGAATCTCGTTATCGATTGTTTTTGTTTCGCGTTTCTCTTTTCCCCCTTTTGGTATTACCCACTCACCTTTGCCTTTTTTCTTCTTTCCATCTGACTTCAATTTCTTCTTCTCTTTCCCCAATTCCCTTTCCCTATTTCTCAATGGACGACTGTTTAAGCAGCGATGAGGACTATTATGACTCCGATCGAGACTCTCTTCATGGTATTGAGAACGAGGACTCTGAAATTCAGTGGGTTCCTAAAGCTCCCGCGACTAAGGTTATTACGAAGGAATCTCTCCTTGCGGCACAGAAGGAGGACATGCGTAGAGTGATGGACTTGCTATCGTTGAGGGAATACCATGCTCGGACCTTACTCATTCATTACCGATGGGATGTAGAGAAATTGTTTGCAGTACTTGTGGAGAAAGGGAAAAGTCATTTGTTTGCTACAGCTGGTGTTAGTATGATTGAGAATCGAAGTAATAGTTCCTCTGAGCCTTCTTCCATGGTGATGTGTGATATCTGCATGGAGGAAGTACATGGCAATGATGCAACGAGAGTGGATTGTGATCATTGCTTTTGTAATAACTGTTGGACTGAACATTTCATTGTGAAAATAAACGAGGGTCAAAGTCGGAGAATCAGATGCATGGCCCACAAATGTAATGCGATTTGCGATGAAGCTGTTGTTAGGAATTTAGTTAGTAAAAGGCATCCAGATCTTGCTAATAAATTTGATCGTTTTCTTCTTGAGTCATACATTGAGGATAACAAAAGAGTCAAGTGGTGTCCGAGTACTCCTCATTGTGGCAATGCTATACGCGTGGAGGATGATGAGTTTTGTGAAGTAGAATGTTCGTGTGGTCTTCAGTTTTGTTTCAGTTGCTTATCAGAAGCTCACTCACCGTGTTCATGTTTGATGTGGGAACTTTGGATTAAGAAGTGTCGAGATGAATCTGAAACTGTTAACTGGATTACAGTACATACAAAGCCCTGCCCAAAATGCCATAAGCCTGTCGAGAAGAATGGAGGTTGTAACCTCGTCAGCTGCATCTGTGGTCAGGCATTTTGTTGGCTGTGTGGTGGAGCCACGGGTCGGGAGCACACTTGGTCGAGTATTTCTGGTCATAGTTGTGGGCGTTACAAAGAAGAATCAGAACAGAAAGCTGAGCGAGCAAAACGGGATTTGTATAGGTATATGCACTATCATAATCGGTACAAAGCTCATACAGATTCTTTTAAGCTTGAAAGCAAATTGAAGGAATCTATACAAGAGAAGATCTCAATTTCGGAAGAGAGGGAATCCATGCTCAGAGATTTTAGTTGGGTAAACAATGGACTGTCTAGACTTTTCAGATCAAGGCGGGTTCTATCTTACTCTTACCCATTTGCATTCTATATGTTTGGGGATGAGCTATTCAAAGATGAGATGACTGAGGCGGAAAGAGAGATAAAGCAGCATCTATTTGAGGACCAGCAACAGCAACTTGAGGCAAATGTTGAGAAGCTCTCCAAGTTTTTGGAGGAGCCATTCGATCAATATACTAAAGATAGGGTAATGGAGATACGGATGCAAGTCATCAATTTATCGGTTATCACTGATACCCTCTGCAAGAAGATGTATGACTGTATTGAGAATGATCTTCTGGGCTCTCTAGAACTGGGTATCCACAATATTGCTCCTTACAAGTCGAAGGGCATCGAGAAGGCACTGGAGCTTTCTGCTTGTTGGAACAGCAAAGCAAATACTTCAGACAAATATCCACCATCAGACTGTGGTACAAGTGGTAAAGTGGAGAGAGGATTGTCGGAATGCGAACGATTGACTAGCTTGAATTCCGAGGAGAATGGATGCTCTTCTAGGAAGCGTGCCAGAGCAGAAGTTGTTACTGGCAACTTTTTTGATCTTAACTTGCCTGCTGAGGTTGTTGATAGAAACTGATCTCTGGAAGTTGCGTGGTTATAAAGTACAGTTGTACAGATCTGACATAAAACATTAGCTTCGTCGTTAGCATGGGGACAAGCAATCAAGGATTAGTAGCCCTAGAGGTGCTTTTTAACTCTTTTTTACTCTTTGTTCATCATGTTTCGTCTCAGGTTGAATATATTGTCTTCGGCTGAGCCTATATTTTGAAAGAGAATCTCTTTTAAGTTCACGTTCTTTATTTCCATTTTGCTTTTGAAAATCCGCAAATTGTACATAGCCGTGATGTCAGGCTTTGATGGTATTGGGAATGTAAATGCTTGATTCTCAGCCTGAGACAGACAACAGAGTATGCATTTTCTGATTGTCTAATATTTTCTTTGGCTGGAAGTAAAA 2447 41.72 MDDCLSSDEDYYDSDRDSLHGIENEDSEIQWVPKAPATKVITKESLLAAQKEDMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGKSHLFATAGVSMIENRSNSSSEPSSMVMCDICMEEVHGNDATRVDCDHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKRHPDLANKFDRFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEESEQKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKESIQEKISISEERESMLRDFSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEAEREIKQHLFEDQQQQLEANVEKLSKFLEEPFDQYTKDRVMEIRMQVINLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKSKGIEKALELSACWNSKANTSDKYPPSDCGTSGKVERGLSECERLTSLNSEENGCSSRKRARAEVVTGNFFDLNLPAEVVDRN 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51123466 51128732 - XM_039045329.1 Bhi10g02046 48387

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02046 593 Pfam Ariadne domain 329 593 IPR045840 -
Bhi10g02046 593 SMART ibrneu5 260 325 IPR002867 -
Bhi10g02046 593 SMART ibrneu5 190 252 IPR002867 -
Bhi10g02046 593 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Bhi10g02046 593 SUPERFAMILY RING/U-box 191 259 - -
Bhi10g02046 593 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 516 - -
Bhi10g02046 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 204 IPR013083 -
Bhi10g02046 593 SUPERFAMILY RING/U-box 260 325 - -
Bhi10g02046 593 Pfam IBR domain, a half RING-finger domain 191 252 IPR002867 -
Bhi10g02046 593 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
Bhi10g02046 593 Gene3D - 248 496 - -
Bhi10g02046 593 SUPERFAMILY RING/U-box 114 202 - -
Bhi10g02046 593 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 516 IPR031127 GO:0004842|GO:0016567
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02046 K11968 ARIH1; ariadne-1 [EC:2.3.2.31] - csv:101205066 1153.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02043 Bhi-Chr10:51121725 Bhi10g02046 Bhi-Chr10:51123466 0 dispersed
Bhi10g02044 Bhi-Chr10:51123466 Bhi10g02046 Bhi-Chr10:51123466 0 dispersed
Bhi10g02046 Bhi-Chr10:51123466 Bhi11g00841 Bhi-Chr11:23660744 7.24E-12 dispersed
Bhi10g02045 Bhi-Chr10:51123466 Bhi10g02046 Bhi-Chr10:51123466 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi10g02044 . 164 589 ARIADNE family AT4G34370 72.2 2.7e-183 639.0
Bhi10g02046 . 164 593 ARIADNE family AT4G34370 71.5 4.0e-182 635.2
Bhi10g02043 . 164 550 ARIADNE family AT4G34370 76.0 4.5e-178 621.7
Bhi10g02045 . 164 543 ARIADNE family AT4G34370 76.8 1.0e-177 620.5
Bhi10g02046 . 58 544 ARIADNE family AT2G16090 76.7 8.1e-224 773.9
Bhi10g02045 . 58 544 ARIADNE family AT2G16090 76.7 8.1e-224 773.9
Bhi10g02044 . 58 542 ARIADNE family AT2G16090 76.8 2.3e-223 772.3
Bhi10g02043 . 58 542 ARIADNE family AT2G16090 76.8 2.3e-223 772.3
Bhi10g02046 . 38 543 ARIADNE family AT3G27710 61.4 2.9e-182 636.0
Bhi10g02044 . 38 543 ARIADNE family AT3G27710 61.4 2.9e-182 636.0
Bhi10g02045 . 38 543 ARIADNE family AT3G27710 61.4 2.9e-182 636.0
Bhi10g02043 . 38 543 ARIADNE family AT3G27710 61.4 2.9e-182 636.0
Bhi10g02046 . 44 522 ARIADNE family AT3G27720 54.2 1.9e-143 506.9
Bhi10g02044 . 44 522 ARIADNE family AT3G27720 54.2 1.9e-143 506.9
Bhi10g02045 . 44 522 ARIADNE family AT3G27720 54.2 1.9e-143 506.9
Bhi10g02043 . 44 522 ARIADNE family AT3G27720 54.2 1.9e-143 506.9
Bhi04g02053 . 61 535 ARIADNE family AT1G05890 73.3 5.2e-217 751.5
Bhi06g00947 . 63 391 ARIADNE family AT1G05890 73.3 2.3e-156 550.1
Bhi06g00949 . 21 345 ARIADNE family AT1G05890 73.8 5.1e-156 548.9
Bhi06g00948 . 17 341 ARIADNE family AT1G05890 73.8 5.1e-156 548.9
Bhi04g02053 . 16 588 ARIADNE family AT1G65430 69.3 7.4e-245 844.0
Bhi06g00947 . 25 392 ARIADNE family AT1G65430 76.2 6.0e-178 621.7
Bhi06g00948 . 16 342 ARIADNE family AT1G65430 79.2 5.1e-169 592.0
Bhi06g00949 . 21 346 ARIADNE family AT1G65430 79.4 6.6e-169 591.7
Bhi04g02053 . 58 454 ARIADNE family AT2G31780 58.4 5.8e-144 508.4
Bhi06g00947 . 50 392 ARIADNE family AT2G31780 55.4 4.0e-121 432.6
Bhi06g00949 . 21 346 ARIADNE family AT2G31780 56.4 2.2e-119 426.8
Bhi06g00948 . 17 342 ARIADNE family AT2G31780 56.4 2.2e-119 426.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003767 0 4 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 5 2 46