Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02046 ATATTTATATTTTACTTATTTCATCGGAAGAGCTCCCACCATTTAGTCGTTGTCCTTTCACTCTCCTCGCCGGAATTTCCAACGATCTTCCCGGAGGGAAACGTTCTCCGGCGTTTCCCGATTTCTCCGGATCCGATTTATTCATCGAATCTCGTTATCGATTGTTTTTGTTTCGCGTTTCTCTTTTCCCCCTTTTGGTATTACCCACTCACCTTTGCCTTTTTTCTTCTTTCCATCTGACTTCAATTTCTTCTTCTCTTTCCCCAATTCCCTTTCCCTATTTCTCAATGGACGACTGTTTAAGCAGCGATGAGGACTATTATGACTCCGATCGAGACTCTCTTCATGGTATTGAGAACGAGGACTCTGAAATTCAGTGGGTTCCTAAAGCTCCCGCGACTAAGGTTATTACGAAGGAATCTCTCCTTGCGGCACAGAAGGAGGACATGCGTAGAGTGATGGACTTGCTATCGTTGAGGGAATACCATGCTCGGACCTTACTCATTCATTACCGATGGGATGTAGAGAAATTGTTTGCAGTACTTGTGGAGAAAGGGAAAAGTCATTTGTTTGCTACAGCTGGTGTTAGTATGATTGAGAATCGAAGTAATAGTTCCTCTGAGCCTTCTTCCATGGTGATGTGTGATATCTGCATGGAGGAAGTACATGGCAATGATGCAACGAGAGTGGATTGTGATCATTGCTTTTGTAATAACTGTTGGACTGAACATTTCATTGTGAAAATAAACGAGGGTCAAAGTCGGAGAATCAGATGCATGGCCCACAAATGTAATGCGATTTGCGATGAAGCTGTTGTTAGGAATTTAGTTAGTAAAAGGCATCCAGATCTTGCTAATAAATTTGATCGTTTTCTTCTTGAGTCATACATTGAGGATAACAAAAGAGTCAAGTGGTGTCCGAGTACTCCTCATTGTGGCAATGCTATACGCGTGGAGGATGATGAGTTTTGTGAAGTAGAATGTTCGTGTGGTCTTCAGTTTTGTTTCAGTTGCTTATCAGAAGCTCACTCACCGTGTTCATGTTTGATGTGGGAACTTTGGATTAAGAAGTGTCGAGATGAATCTGAAACTGTTAACTGGATTACAGTACATACAAAGCCCTGCCCAAAATGCCATAAGCCTGTCGAGAAGAATGGAGGTTGTAACCTCGTCAGCTGCATCTGTGGTCAGGCATTTTGTTGGCTGTGTGGTGGAGCCACGGGTCGGGAGCACACTTGGTCGAGTATTTCTGGTCATAGTTGTGGGCGTTACAAAGAAGAATCAGAACAGAAAGCTGAGCGAGCAAAACGGGATTTGTATAGGTATATGCACTATCATAATCGGTACAAAGCTCATACAGATTCTTTTAAGCTTGAAAGCAAATTGAAGGAATCTATACAAGAGAAGATCTCAATTTCGGAAGAGAGGGAATCCATGCTCAGAGATTTTAGTTGGGTAAACAATGGACTGTCTAGACTTTTCAGATCAAGGCGGGTTCTATCTTACTCTTACCCATTTGCATTCTATATGTTTGGGGATGAGCTATTCAAAGATGAGATGACTGAGGCGGAAAGAGAGATAAAGCAGCATCTATTTGAGGACCAGCAACAGCAACTTGAGGCAAATGTTGAGAAGCTCTCCAAGTTTTTGGAGGAGCCATTCGATCAATATACTAAAGATAGGGTAATGGAGATACGGATGCAAGTCATCAATTTATCGGTTATCACTGATACCCTCTGCAAGAAGATGTATGACTGTATTGAGAATGATCTTCTGGGCTCTCTAGAACTGGGTATCCACAATATTGCTCCTTACAAGTCGAAGGGCATCGAGAAGGCACTGGAGCTTTCTGCTTGTTGGAACAGCAAAGCAAATACTTCAGACAAATATCCACCATCAGACTGTGGTACAAGTGGTAAAGTGGAGAGAGGATTGTCGGAATGCGAACGATTGACTAGCTTGAATTCCGAGGAGAATGGATGCTCTTCTAGGAAGCGTGCCAGAGCAGAAGTTGTTACTGGCAACTTTTTTGATCTTAACTTGCCTGCTGAGGTTGTTGATAGAAACTGATCTCTGGAAGTTGCGTGGTTATAAAGTACAGTTGTACAGATCTGACATAAAACATTAGCTTCGTCGTTAGCATGGGGACAAGCAATCAAGGATTAGTAGCCCTAGAGGTGCTTTTTAACTCTTTTTTACTCTTTGTTCATCATGTTTCGTCTCAGGTTGAATATATTGTCTTCGGCTGAGCCTATATTTTGAAAGAGAATCTCTTTTAAGTTCACGTTCTTTATTTCCATTTTGCTTTTGAAAATCCGCAAATTGTACATAGCCGTGATGTCAGGCTTTGATGGTATTGGGAATGTAAATGCTTGATTCTCAGCCTGAGACAGACAACAGAGTATGCATTTTCTGATTGTCTAATATTTTCTTTGGCTGGAAGTAAAA 2447 41.72 MDDCLSSDEDYYDSDRDSLHGIENEDSEIQWVPKAPATKVITKESLLAAQKEDMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGKSHLFATAGVSMIENRSNSSSEPSSMVMCDICMEEVHGNDATRVDCDHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKRHPDLANKFDRFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSISGHSCGRYKEESEQKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKESIQEKISISEERESMLRDFSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEAEREIKQHLFEDQQQQLEANVEKLSKFLEEPFDQYTKDRVMEIRMQVINLSVITDTLCKKMYDCIENDLLGSLELGIHNIAPYKSKGIEKALELSACWNSKANTSDKYPPSDCGTSGKVERGLSECERLTSLNSEENGCSSRKRARAEVVTGNFFDLNLPAEVVDRN 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51123466 51128732 - XM_039045329.1 Bhi10g02046 48387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02046 593 Pfam Ariadne domain 329 593 IPR045840 -
Bhi10g02046 593 SMART ibrneu5 260 325 IPR002867 -
Bhi10g02046 593 SMART ibrneu5 190 252 IPR002867 -
Bhi10g02046 593 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Bhi10g02046 593 SUPERFAMILY RING/U-box 191 259 - -
Bhi10g02046 593 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 516 - -
Bhi10g02046 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 204 IPR013083 -
Bhi10g02046 593 SUPERFAMILY RING/U-box 260 325 - -
Bhi10g02046 593 Pfam IBR domain, a half RING-finger domain 191 252 IPR002867 -
Bhi10g02046 593 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
Bhi10g02046 593 Gene3D - 248 496 - -
Bhi10g02046 593 SUPERFAMILY RING/U-box 114 202 - -
Bhi10g02046 593 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 516 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02043 Bhi-Chr10:51121725 Bhi10g02046 Bhi-Chr10:51123466 0 dispersed
Bhi10g02044 Bhi-Chr10:51123466 Bhi10g02046 Bhi-Chr10:51123466 0 dispersed
Bhi10g02046 Bhi-Chr10:51123466 Bhi11g00841 Bhi-Chr11:23660744 7.24E-12 dispersed
Bhi10g02045 Bhi-Chr10:51123466 Bhi10g02046 Bhi-Chr10:51123466 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02046 K11968 - csv:101205066 1153.27