Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02057 TTATATGAAGTAGGCGATTTCATTGAAATTTGAAAAATTAGACAAAAATATTAAACTATTTACAGAAATAACAAAAAAAATATTCATAAACTTCTATGAGCGATAGACTTATATCAAAATCTATCAAGTGAGTGAAAAAAATTAAAATTTTACTATTTTATATAAATAATTTGACTAACTTTTCTATTTTAAAAATTTCCCATATGATTTTAAGACAGTAGAAAGAAATGGAGGGGATGGTGAGGTGGCAATAGACATGAAAAATTGGAATGTGATGGACCGTAGAAGATGAAAACTCGAGGGGCGTTAAATTCGTGAAAAGTGACGTGTCACTCATCCAAGGTCCCCGTCGACAAATCGCATGGAGGACCTAACAAAAAGAGTCAAACCATCCCATTAAACCTCTCTCTCTCTCTCTCTCTCTCTTCTCTTCCATTAAACCCTCTTCGCTCTGCAACAAAACTCACTCCGTCCGCCATTGCTGCACCTTCCATGCCGACCGCCCCTTCCCCTTCCCCCTCCCCTTCTCCTTCCACCGCCGCCTCCGCCGCCAATTTCCCTCCCCCTTCCTCCTTACAGCCGGCGAAGCTCCCCGTTGACTTCAGTCCTCCTCTAATCGCCATGGTTGTCGTCATCGCTACCGCCTTCCTCATCGTCACTTACTCTCGCCTAATCTCCCGTCACCTCATCCCTCCCATTCTCCACCTCCTCCGTCTCCACCGCCGTCGATGGCGCCGGTGGCGCCGCCGACGTCGACGCGCCCGATCTTATCTCCCGTCCTCATCTGGCGGTGACCTAGATTCACTCCCTTACGATTCGCCTTTCTTCGAACCTACAGATGGCTTCCACGTTTTCTCTCCGTATGGTCTTGACGAATCCGTAATCAAGACGATTCCACTCTCTGTCTACACTGCTAAAAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCAGAACGCTTCCGATTTGTTCTCACGCGTTTCATGTTGATTGTATTGATGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTAGTTTTTAGACCGGAATCTCCATTCACGCCGGTTATGGCGGCTAGAATCCGGCCAAGCCTTGATGATACGATCTTACGAAGCATCGTATTGGAGCCGCTTGTTGAAGGCACTATTCCTAATCGAGATTCTTATCATGCGACGGAATCGGAAATTACTCCCTGTGTTGATGAACCACGGAATAGCAATTCCGTGGACGATCAAATAAACGGACGAGATTTCTTACTGAAGCGATCGTATTCATTCGGATTCGAACGAAGCTTAGCGTCGGAGAGAATGATTTTGGAACCAGCGACTACATCTCCGTGGCGGTACCGTCGTGGAAGCTTCTGGATGAAACGTCCGTCGCCGTTCGGATCTCTACCAAAAGCGAGAGTGTTCTCGTTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGAAGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGGAGTAAGTCAATGACGAGTCCTATGTTTCTCCGATCGTCGGTAACCGGCGGAGGAGCGGCGACGTTCTCATCAAGCCGGTTGAGATGCGGAGATCCCGAGGCGTTATTATCACCGGAGAGATTCAACAGAAGATGAGAGAAAAAAGAAGAGGAAAACATGAAAACATGAGGACACGTGTGCGGTTATGATGAGGGGAGAAATGGACGGCGGGAGATAGGTCGGAGGGAGGAGAGAGAATCGGCGGCGGTGGCGGTGGAGAGAGAGAAATTTGGGGAGATTTTAATGCGAGGTGTCTGGCAAATTTTGTAGAGGTCATTAATGGGAGGTGGGGAGAAGCATTTAATGAAAAATTGACGAGAGAGAATACGCAGTTTCTCTCTCTCTCTCCCTTAACTTTAATCGATGAACCACTGCTCATATGAGGTTAAATCCCCACTCCAACCAATTTAATGCCCAATTTTCCCCATTTACTTCCTCTTCTTCACTCTTTTATTTTTGCTCATTGGTCCCTCTAAACTTTTCTAAATTACAATTTTGGTCCTTAGACTA 2115 46.86 MPTAPSPSPSPSPSTAASAANFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPTDGFHVFSPYGLDESVIKTIPLSVYTAKSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGTIPNRDSYHATESEITPCVDEPRNSNSVDDQINGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGSFWMKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGAATFSSSRLRCGDPEALLSPERFNRR 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51375152 51377266 + XM_039046967.1 Bhi10g02057 48398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02057 402 Pfam Ring finger domain 147 190 IPR001841 -
Bhi10g02057 402 SUPERFAMILY RING/U-box 144 196 - -
Bhi10g02057 402 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 194 IPR013083 -
Bhi10g02057 402 ProSiteProfiles Zinc finger RING-type profile. 148 190 IPR001841 -
Bhi10g02057 402 CDD RING-H2_PA-TM-RING 147 190 - -
Bhi10g02057 402 MobiDBLite consensus disorder prediction 1 23 - -
Bhi10g02057 402 SMART ring_2 148 189 IPR001841 -
Bhi10g02057 402 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 373 - -
Bhi10g02057 402 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 373 IPR044675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02057 Bhi-Chr10:51375152 Bhi12g01440 Bhi-Chr12:46412911 5.31E-23 dispersed
Bhi10g02057 Bhi-Chr10:51375152 Bhi01g01040 Bhi-Chr1:19092162 1.09E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02057 - K19041 csv:101206300 652.129