Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02077 TTAAAATGGGATAGAGGATTGTTACAGTTTGGAAATAAATAGCGGGAGAGAGAAACCATTTGAAACAGAGAGTCTTCTCCTCCTTCATCTTCTCCAAGAAGAAGCAAACAACGCTCTACAATCTGAACCAGAGCCACCGCCATGGCCATGTCAAGGTGCTTCTTAGACATCACCATAGGTGGAGAGCTTGAAGGAAGAATCGTTATTGAGCTTTACAACCACGTCGTTCCTAAAACCGCCGAGAATTTCAGGGCGCTTTGCACTGGTGAGAAAGGCATTGCTCCTAACACCGGCGTTCCTCTCCATTTCAAGGGTGTCTGCTTTCATCGTGTAATCAAAGGATTTATGATTCAAGGTGGGGATATTTCCGCTGGCGATGGTACTGGGGGAGAATCTATTTATGGTTTGAAGTTTGAAGATGAAAACTTTGAACTGAAACATGAAAAGAAAGGAATATTGTCTATGGCTAACTCTGGTCCCAACACAAATGGGTCCCAATTTTTCATAACAACAACACGTACACCTCATTTGGATGGAAATCATGTGGTCTTTGGGAAGGTAGTGAAAGGAATGGGAGTAGTACGTTCAATTGAACATGTTATAACGGGTGAGAATGATCGTCCAACGCTTGATGTTGTAATTGCGGATTGTGGAGAAATTCCTGAAGGGTCGGATGATGGAGTATCAAATTTGTTCAAAGATGGTGACACGTATCCTGATTGGCCAGTTGATCTTGACCAGAGTCCGTTTGAACTTTCTTGGTGGATGAGCGCTGTGGATTCCATTAAGGCTTTTGGTAATGTTCATTTTAAGAAGCAAGATTACAAGATGGCCCTCAGAAAGTATAGGAAGGCTTTGCGATATCTTGACATTTGCTGGGAGAGAGAAGGGATTGATGAAGAGAAGAGTACTTGTCTGAGGAAGACCAAATCACAGATATTCACAAACAGCTCTGCTTGTAAGCTGAAGTTAGGGGATCTAAAGGGAGCATTGTTGGACACTGAATTTGCAATGCGTGAAGGGGATAAGAATGTAAAAGCCATGTTCCGCCAAGGTCAGGCACACATGGCTCTTAATGACATTGATGCTGCAGTTGAAAGCTTTAAAAGAGCATTGGATTTGGAGCCAAATGATGCTGGAATAAAGAAAGAGCTGGCCGCTGCTAAGAAAAAGATTGCTGATAGACGTGATCAAGAAAGGAAAGCATATGGCAAGATGTTCCTATAAGACTTTGCTCTCCAATGGTTTTGTTTTGGAGCCAAATGTGAAGATAGAGGCCCAGTTACTAATGGCTAGTTCAACTATACAAAATTGCAATTGAAAAGTGAAAAGTGGGGATCGAATCATCAATTTTTGAGAAATATCTTATCTATTGAGTTATGTTCAGATTGGCTATAAAATTACACTTTGCATATTGCCCTATTCAATGAAAATATATGGACGAACAAGTAGCTTTTGTGATTTTGATATGGATACTATTCATTTTTGTCTAAACGGTTGTAATA 1505 40.73 MAMSRCFLDITIGGELEGRIVIELYNHVVPKTAENFRALCTGEKGIAPNTGVPLHFKGVCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFELKHEKKGILSMANSGPNTNGSQFFITTTRTPHLDGNHVVFGKVVKGMGVVRSIEHVITGENDRPTLDVVIADCGEIPEGSDDGVSNLFKDGDTYPDWPVDLDQSPFELSWWMSAVDSIKAFGNVHFKKQDYKMALRKYRKALRYLDICWEREGIDEEKSTCLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMREGDKNVKAMFRQGQAHMALNDIDAAVESFKRALDLEPNDAGIKKELAAAKKKIADRRDQERKAYGKMFL 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52129121 52135342 + XM_039044811.1 Bhi10g02077 48418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02077 361 ProSiteProfiles TPR repeat profile. 298 331 IPR019734 GO:0005515
Bhi10g02077 361 CDD cyclophilin_ABH_like 4 171 - -
Bhi10g02077 361 Gene3D - 1 179 IPR029000 -
Bhi10g02077 361 Gene3D Tetratricopeptide repeat domain 208 361 IPR011990 GO:0005515
Bhi10g02077 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 360 - -
Bhi10g02077 361 SUPERFAMILY TPR-like 212 356 IPR011990 GO:0005515
Bhi10g02077 361 SUPERFAMILY Cyclophilin-like 3 174 IPR029000 -
Bhi10g02077 361 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 SMART tpr_5 298 331 IPR019734 GO:0005515
Bhi10g02077 361 SMART tpr_5 212 245 IPR019734 GO:0005515
Bhi10g02077 361 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
Bhi10g02077 361 Pfam Tetratricopeptide repeat 299 331 IPR001440 GO:0005515
Bhi10g02077 361 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Bhi10g02077 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 1 360 - -
Bhi10g02077 361 ProSiteProfiles TPR repeat region circular profile. 298 331 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01141 Bhi10g02077 CCT
Bhi03g01041 Bhi10g02077 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01141 Bhi-Chr5:40859054 Bhi10g02077 Bhi-Chr10:52129121 0 dispersed
Bhi05g01142 Bhi-Chr5:40859054 Bhi10g02077 Bhi-Chr10:52129121 0 dispersed
Bhi09g01113 Bhi-Chr9:25984429 Bhi10g02077 Bhi-Chr10:52129121 1.13E-72 dispersed
Bhi09g01114 Bhi-Chr9:25985058 Bhi10g02077 Bhi-Chr10:52129121 1.13E-72 dispersed
Bhi10g02077 Bhi-Chr10:52129121 Bhi05g01743 Bhi-Chr5:56018753 3.91E-70 dispersed
Bhi10g02077 Bhi-Chr10:52129121 Bhi10g02078 Bhi-Chr10:52131530 0 tandem
Bhi01g00282 Bhi-Chr1:5310157 Bhi10g02077 Bhi-Chr10:52129121 1.65E-38 transposed
Bhi06g01849 Bhi-Chr6:51888734 Bhi10g02077 Bhi-Chr10:52129121 9.72E-16 transposed
Bhi08g00059 Bhi-Chr8:2777649 Bhi10g02077 Bhi-Chr10:52129121 7.57E-39 transposed
Bhi09g00826 Bhi-Chr9:18109268 Bhi10g02077 Bhi-Chr10:52129121 1.74E-14 transposed
Bhi11g02339 Bhi-Chr11:63582237 Bhi10g02077 Bhi-Chr10:52129121 5.58E-39 transposed
Bhi10g02077 Bhi-Chr10:52129121 Bhi05g01140 Bhi-Chr5:40859054 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02077 K05864 - csv:101207288 683.33