Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02117 ATCTTCTTTCTCTCTCTACTTCACGCGCTGAACCCCCTCGTTTTCGTTTTCTTCTTCACGCCAAGCCGGCCAAGACCCACCTCCGAGCTTCCACTTCCGCCGCCGCTCACTTCGTCCGCCTTAACGCCGCCGTCTTCCTCAGCTTGGCGCCGATCGCGGCCGGTGGGAGGGTTGGGAGTTTGGTTTTCTCTCTCTCTTTTAATCTGTGCTCTCTCTTTCAAGATCAGCGCCGCCGCTCGTGGTACCCCGCCGCCATTGGGTGTCACCGAGCTGTCGGTCAGCGTTCAGTTGGAGTAAGTTTCTGATTCGGAGTTTGGTGGAGATTATAGCGGCTGTACAGCAGATTGAAAGACGTTTGAGTGACATTTCGGCAAAGGCAAGGGCAAGGGCGTTCGAGGTGGTTGACAGGATATTGCCATAGCCATGGGAACAGATTAGTCATGAGCTTCTGCATCATTGTGGTGCAATGGGGGTATCGTTACTTAAACTGCTTCTTAGACATATATCATCATTTCTTCAACTTTCATCATCTGACTACATAAATTTACAACCAACTCTGAAGTACTACCAGAAAATAGAAGGGGTCTTGAAACTATTGAGACCAATACTGAATGCTGTTGTTGATTCAGATATAGCTTCTGATAAAGAGCTTACTCAGGCATTTGAAGAACTTGATCACTCAGTGGATGAACTAAGGGTGCTCTTTGAAAATTGGCAACCGTTGTCGAGTAAAGCCTACTTTGTATTGCAAAGTGAAGCATTGATATTGAAGATTGGGAAATTTAGCTTGGATATAGTCCAGCTTCTTCAGTCTTCAAATGAAAATCTTCTGGAGGAATTGAGTTCAACATCTCTCGAGCACTGTGTCCAAAAAATTAAGCATATTGGAAAGGAGGAAATATCTTCCGTTATTAAAGATGCCATAAGGAATCAAGTAGATGGTATTGCTCCCAGCTCAGATGTTTTGGTGAAACTTGCGGATTCCCTAAGCTTGAGATCAAATCAGGAGATCTTAATTGAGGCTGTGGCCCTTGAAAAGTTGAAAGAGAGTGCAGAACAAGCTGAAAATACTGGAGAAGCCGAGGACATTGATCAAATGATTGCTCTAGTAACCCGTATGCATGAACGACTTATTATGATAAAGCAGTCCCAAAGTTCTAGTCCTGTACCAATACCTGCTGATTTCTGCTGTCCTCTTTCTCTCGAATTAATGACAGATCCAGTTATTGTAGCATCAGGGCAGACCTATGAGCGTGTATTTATTAAAAATTGGATTGATCAAGGGCTCAATGTTTGCCCGAAGACTAGACAGACATTGGTTCACACGAATCTTATACCTAATTACACTGTTAAGGCTCTGATTGCAAACTGGTGTGACACAAACAACGTGAAATTGTCTGATCCCTCAAAGTCAGTGAACTTAAACCAACTTTCGCCCCTCCTGGTTGGGAGCTTTGAGTCTGATACCCACCGAGAACCCCTTTTTCCTCATTCTCCTGGCTACCAACCGATGTCTCCTCAGTCAACCAGGTCTGCAGGTTCAGGAAAGAACTTGAACTCACTTGTTGGAACCCATCGAGATGGAAGTTCTTTGCTCTCCCACTCTCTCTCTGACGATTCCTTGTCAAATAATGCTGGAGATGAACGAGGGATTGATGTTAGTAGACTATTGCTTTCAAGTTCAGAAGATCAAATGGCCAAATTGGAAGAAAATGGTTGCGATTCAGTTGCTAAACCATCTACGTCACCATCTGGAACCAATGTTCCAAATACCAGTGGTGAGGACGAAGCACCTCATAGTCATAACAGGACTTCCTCCACCTCTAGTGCTGTCTCAAATGCTAATCACTCTCGAGGAACTTCAGGGGAGGCCAACGAAGCTACACATTTGTCAACGAATCTGACAGGTTATGGCAGTGATGCTGCTGGTGAGAGTAAATCAGAGCCCTCGGCTTCTGCTACCTTGACTACCAACCACAGAGAACCAGAGCGAGAGCATCCACCCAGACTATCTGACCCAAGGTCTCGAGGTAATACGATGTGGCTCCGGCCATCAGAGAGGTTTGCCTCTAGAATAATTACATCATCTGCTAATGAGACAAGGCCGGATCTTTCTGCTATTGAAGCACAAGTTCAGAAGGTGGTAGAGGAATTAAAAAGCAGTTCACTTGACACTTTAAGAGGTGCTACAGCTGAATTGCGGCTGCTGGCCAAACATAATATGGATAACCGGATAGTGATTGCTCAATGTGGGGCCATTGAATATTTGGTTGATTTGCTCCTCTCTGCAGACTCGAAGATTCAGGAGAATGCTGTGACAGCACTTCTAAACTTATCCATCAATGATAATAACAAAACCGCCATAGCCCAGGCTAATTCCATTGAACCTTTGATTCATGTTCTTAAAACTGGGAGCCCAGAAGCAAAGGAGAACTCAGCAGCAACTCTTTTTAGCCTCTCAGTGATTGAAGAGAACAAGGTCAAAATTGGAAGGTCTGGAGCAATAGGACCTCTGGTTGAATTATTGGGCAACGGAACTCCGAGGGGGAAAAAGGATGCAGCTACAGCTCTGTTTAATTTGTCAATATTCCATGAGAACAAAGCTAGAATTGTACAAGCTGGAGCTGTGAGGCATCTTGTGGAGTTGATGGACCCAGCAGCAGGAATGGTTGACAAGGCTGTTGCTGTGTTGGCAAATCTTGCCACTATTCCCGAGGGTAGGTCTGCAATTGGCCAGGAAGGTGGAATTCCCGTTCTGGTTGAGGTCGTCGAGTTGGGTTCTGCGAGAGGAAAGGAAAATGCGGCAGCAGCATTGTTGCAGCTTTGCACAACAAGCAATAGACATTGCAGTATGGTGCTCCAAGAAGGAGCCGTGCCACCATTAGTGGCATTGTCTCAATCTGGCACCGCTAGAGCCAAAGAAAAGGCCCAAGCACTTCTAAGCCATTTCAGAAGCCAGAGACATGGGAATTCAGGAAGAGGGTAAATTCTTTTATCTGAAAATCTTAAATGCCATCTGAGGTTCTTTGAAGAGGAGATGTATGAGAATTTCATGTACATCTAATGTAACAAATAATGCATGTGAAGGTTTTTCTCGTTCCTTGATTTTTTGCACTGTTCGTTTCCCAAAAGTTGGAAGGCAGAGTGAAACATTGAAAAAGGAAAAAAAAGTTTACTTAAGATTGGATTAGGTTCTGTAAAATATTCCATTCTAGTTTGTGAATCGATTATTATTTGTAAGTCTGATCTTTAACTTCTTTCTTGGAAAAAAAAAAGTTAATATGATGTATATACTTTTGTATTTTGTCTGA 3311 43.94 MGVSLLKLLLRHISSFLQLSSSDYINLQPTLKYYQKIEGVLKLLRPILNAVVDSDIASDKELTQAFEELDHSVDELRVLFENWQPLSSKAYFVLQSEALILKIGKFSLDIVQLLQSSNENLLEELSSTSLEHCVQKIKHIGKEEISSVIKDAIRNQVDGIAPSSDVLVKLADSLSLRSNQEILIEAVALEKLKESAEQAENTGEAEDIDQMIALVTRMHERLIMIKQSQSSSPVPIPADFCCPLSLELMTDPVIVASGQTYERVFIKNWIDQGLNVCPKTRQTLVHTNLIPNYTVKALIANWCDTNNVKLSDPSKSVNLNQLSPLLVGSFESDTHREPLFPHSPGYQPMSPQSTRSAGSGKNLNSLVGTHRDGSSLLSHSLSDDSLSNNAGDERGIDVSRLLLSSSEDQMAKLEENGCDSVAKPSTSPSGTNVPNTSGEDEAPHSHNRTSSTSSAVSNANHSRGTSGEANEATHLSTNLTGYGSDAAGESKSEPSASATLTTNHREPEREHPPRLSDPRSRGNTMWLRPSERFASRIITSSANETRPDLSAIEAQVQKVVEELKSSSLDTLRGATAELRLLAKHNMDNRIVIAQCGAIEYLVDLLLSADSKIQENAVTALLNLSINDNNKTAIAQANSIEPLIHVLKTGSPEAKENSAATLFSLSVIEENKVKIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSIFHENKARIVQAGAVRHLVELMDPAAGMVDKAVAVLANLATIPEGRSAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTTSNRHCSMVLQEGAVPPLVALSQSGTARAKEKAQALLSHFRSQRHGNSGRG 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 53247366 53260767 + XM_039044719.1 Bhi10g02117 48458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02117 839 MobiDBLite consensus disorder prediction 503 517 - -
Bhi10g02117 839 Pfam U-box domain 236 306 IPR003613 GO:0004842|GO:0016567
Bhi10g02117 839 PANTHER U BOX DOMAIN-CONTAINING 8 835 - -
Bhi10g02117 839 SMART arm_5 790 830 IPR000225 GO:0005515
Bhi10g02117 839 SMART arm_5 708 747 IPR000225 GO:0005515
Bhi10g02117 839 SMART arm_5 626 666 IPR000225 GO:0005515
Bhi10g02117 839 SMART arm_5 748 788 IPR000225 GO:0005515
Bhi10g02117 839 SMART arm_5 667 707 IPR000225 GO:0005515
Bhi10g02117 839 SMART arm_5 585 625 IPR000225 GO:0005515
Bhi10g02117 839 MobiDBLite consensus disorder prediction 415 526 - -
Bhi10g02117 839 MobiDBLite consensus disorder prediction 346 389 - -
Bhi10g02117 839 SMART Ubox_2 239 302 IPR003613 GO:0004842|GO:0016567
Bhi10g02117 839 MobiDBLite consensus disorder prediction 420 440 - -
Bhi10g02117 839 Coils Coil 179 209 - -
Bhi10g02117 839 ProSiteProfiles U-box domain profile. 235 309 IPR003613 GO:0004842|GO:0016567
Bhi10g02117 839 SUPERFAMILY RING/U-box 224 312 - -
Bhi10g02117 839 MobiDBLite consensus disorder prediction 333 392 - -
Bhi10g02117 839 MobiDBLite consensus disorder prediction 447 502 - -
Bhi10g02117 839 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 310 IPR013083 -
Bhi10g02117 839 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 678 720 IPR000225 GO:0005515
Bhi10g02117 839 CDD RING-Ubox_PUB 240 282 IPR045210 -
Bhi10g02117 839 Pfam Armadillo/beta-catenin-like repeat 587 624 IPR000225 GO:0005515
Bhi10g02117 839 Pfam Armadillo/beta-catenin-like repeat 626 665 IPR000225 GO:0005515
Bhi10g02117 839 Pfam Armadillo/beta-catenin-like repeat 669 706 IPR000225 GO:0005515
Bhi10g02117 839 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 719 760 IPR000225 GO:0005515
Bhi10g02117 839 Coils Coil 396 416 - -
Bhi10g02117 839 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 596 638 IPR000225 GO:0005515
Bhi10g02117 839 SUPERFAMILY ARM repeat 555 828 IPR016024 -
Bhi10g02117 839 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 8 835 - -
Bhi10g02117 839 Gene3D - 534 835 IPR011989 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02117 Bhi-Chr10:53247366 Bhi10g02119 Bhi-Chr10:53247366 0 dispersed
Bhi10g02116 Bhi-Chr10:53247366 Bhi10g02117 Bhi-Chr10:53247366 0 tandem
Bhi10g02117 Bhi-Chr10:53247366 Bhi10g02118 Bhi-Chr10:53247366 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02117 - - csv:101212423 1463.74