Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02237 TCTCTAACAAATTTATTTCATTTTCCTTCTTTAATTTATAAAATTGTTTTGAATAAATAAATAAATAATCGTTGATTTCCTTTTTCTCTCTTTCTGTTCTCCTTCTGTTGGGGATTGTGAAACTCGAAGATCGGATCCAGCGCTCTCTCCCTTTCCAAACCCTAAAACCAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTTTAAAAGGGAAACAAAGTTCTCTCCCTTTTCGCCATTGTCATTTCTTGTTCGATCTCTTCTTCTTCTTCTTCTTCCTTTTTTTTTTTTTTCAAATTTAATTTTTTAAGTTTTACAGGTTTTTTTTTCTTTATTCATGGACTTTAGTGGCTCCAAGAAAGAGGAAAAAACTGCAATAATCCATACCAGTTGAGAGCACGACCGAACCCAGAATAATCCAAGTTTTTTTCTAAAAAGAAATTAGTGAAAAAAAGAGGAAGAATGTCATCATCAAATTCACCATGTGCGGCGTGCAAATTCCTCCGAAGAAAATGCACACAAGAATGTGTATTCGCACCATATTTCCCACCAGATCAACCACAAAAATTCGCCAACGTCCACAAAGTATTTGGCGCAAGTAACGTGGCTAAGCTCTTAAACGAACTCAACGCAACACAACGTGAAGACGCGGTTAATTCCTTAGCCTACGAAGCCGAATTCCGTTTACGTGACCCAGTCTACGGTTGCGTTGGCTTAATCTCTGTCCTTCAACATAAACTCAAACAAATGCAAAACGACCTTTACAATGCTAAAAAGGAACTCGCTTCTTACATTGGCCCACAAGCCATGCTCCCTATTCTCCAACCTCAACCTCCTACTCCCAATCCCACCCCTTACAACATGTCCCCTATGCTAACCATCCCCCCTCCCGCCATCGCCGCTGCAACCGCTCCTGGCTCCTCCCAACAGCAAATTCTCATCCGCGACTCCGCTCATCATCACCAAATGCAACAACAACACCAACACCAACAACAGCAACAATTGTTCGAGGCGCAGCAATTGGCAGCCGCGGTCGCTGCCAGAGAGCAACAAGAAATGTTTAGAGCTTATGAGCATAAGCAAAACCAACAACAACAGAGACAGCAGCAACAGCAACAGCAACAGCAACATGAGCTTTTGAGGTTCAATGGGTTTGATGCTGGTGCTGCTGGTGCTGGTGGATTTAATAATCAAATGAATTCTTCAGGCTCTAATTTAACATTAGGGACTTTTGTTGATAACACTTCCTACCAAATCCAAACCCAACCCGAACATTCTTCACATTCGCATTCTCATCCGCTTCAAGTACAGTTATTTCTACAGCCGCAACAATCTCAACAACAGATTGATCAATCACAACAGACTCATCATTCACTACATCAATCTCACAAGCCTGAACCTACTCCTTCTGCAGATGATGGTAGGAATAATAATAATAATATTAACATTGGCCCTTCTTGTTAATTTTCTTTTTCTTTTTTTTTTCCTCTTTAGGAATTTAATTTTGTTTTTTTTTTCTTTTTCTTTAATTAGCTTTTGGTTCTGATTATCTGATTAAGACGACTGTTTCATGAAGGGGATTATTAGTTTTAAAATGGGTGGGAGTATTATTCACAGCAGGCAAGATCCGTTTTGCATTTATGAATTCATTTTCTTCATCAATTCATTTTTTTTATGTTTTAAAAAAAAACATAAAAAGAATTATTGTCTTTTCACTGCCAAGGGACGTGTCTCACTTATTAACTATAAATGGAACTCTTTTTAGAAATTAAACCC 1784 37.72 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNATQREDAVNSLAYEAEFRLRDPVYGCVGLISVLQHKLKQMQNDLYNAKKELASYIGPQAMLPILQPQPPTPNPTPYNMSPMLTIPPPAIAAATAPGSSQQQILIRDSAHHHQMQQQHQHQQQQQLFEAQQLAAAVAAREQQEMFRAYEHKQNQQQQRQQQQQQQQQHELLRFNGFDAGAAGAGGFNNQMNSSGSNLTLGTFVDNTSYQIQTQPEHSSHSHSHPLQVQLFLQPQQSQQQIDQSQQTHHSLHQSHKPEPTPSADDGRNNNNNINIGPSC 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 58152963 58155044 - XM_039046189.1 Bhi10g02237 48578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02237 333 MobiDBLite consensus disorder prediction 288 302 - -
Bhi10g02237 333 Coils Coil 206 226 - -
Bhi10g02237 333 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Bhi10g02237 333 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 296 - -
Bhi10g02237 333 MobiDBLite consensus disorder prediction 288 333 - -
Bhi10g02237 333 MobiDBLite consensus disorder prediction 317 333 - -
Bhi10g02237 333 Coils Coil 86 106 - -
Bhi10g02237 333 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bhi10g02237 333 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00118 Bhi-Chr3:3150916 Bhi10g02237 Bhi-Chr10:58152963 1.12E-43 dispersed
Bhi06g01184 Bhi-Chr6:34029637 Bhi10g02237 Bhi-Chr10:58152963 4.06E-59 dispersed
Bhi06g01185 Bhi-Chr6:34030228 Bhi10g02237 Bhi-Chr10:58152963 6.32E-59 dispersed
Bhi10g02237 Bhi-Chr10:58152963 Bhi11g01604 Bhi-Chr11:46239538 1.24E-50 dispersed
Bhi10g02237 Bhi-Chr10:58152963 Bhi06g00551 Bhi-Chr6:12401586 1.76E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2266 PF03195 LOB 1.70E-41 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02237 - - cmos:111434896 339.732