Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02285 ATGGTTTCTTCAAATTCCATCTCTCTACTCACATTTCTCACTTTCCTCTTCCTCCTCCCTTCTTCATTCTCCGCCGTTGTTCCAACGACGGAGATTTGCCGATCCACCACCTTTCCATCTTTCTGCAATGCCTTCCTTCCCAACTCCCCGGCCTCTGTCCACTCCCATTGTCGCTTCACTCTCCACCATGCCCTCACCCACGCACAAACCTTCCTCGCACTTGTCGACGCGCACCTTAGCCTCTTTCCCTTCCCCTCCGCCCTCCACGACTGTCGCAGCCTCGCAGAAGCCAACCTCGACTACATAACCCAAACTTTTTCCATAGTCAACTCCACTTCCGTGGCCCTTCCCTATTACCAAGCCCATGAGATGATGTCCTTGATGAGTGCAATGATCACCAATGAAAACACTTGTTATGAAGGACTGGCTGGCTTGGGCTCAGCCATTGGCTTGGTTGATAAGGTGTTAGAAGCCATCTCTTTCGACAGAAAGTTATATAGTTTGTACCTTTCATTGTTCAAAATGGGTTGGGTTTCTAAGAACATGAAGGCTCCTATTTTGCCAAAAATGAACCATTTTGGGGTCGGGAAAGGGCAGTTGAAGCTTAAAATGTCGCCTAAAGACCGTGCATATTATGAGCGCTTGGTGCATAGCAAGAAGCCAGCGGCCGCTAGAAGGCTTCTTCAGACCAATTACGAAAATGATGGAATTTTGGTCAATGGCGTGGTTGCGGTGGATCAAAATGGAACATACGACTTCACAAATATCAGTGCTGCCATTGCGGCGGCTCCAGACAAGACCACCGTCACCAAAGGATACTTCTTGATCTTCGTCACTGCCGGCATTTACAACGAGACTGTGTTGGTCCCAAAAAATAAAAGATATGTGTTGTTAATCGGAGAAGGTAACAACCAAACCATTATCAATGGCAACAAAAACGTCGTTGATGGATCGACCACTTTCAATAGCGCAACTGTCGCTGTGGAGGGAACAGGGTTCTTTGGAGTCAATCTAACGATCAGCAACACTGCTGGCCCCGCCAAACACCAGGCGGTCGCGCTGCGAGTGAGCGCCGACAACGCAACGTTATACAGCTGCATATTCGAAGGCTACCAAGACACTCTCTACACGCACTCCCTCCGTCAATTCTACCGAGAATGTGACATCTACGGTACTGTCGACTTCATCTTTGGCAATGCCGCCGTCGTCTTACAAAATTGCAACATCTATGCCCGCCTCCCGTTGAGTGGCCAGTTCAATGCCCTCACAGCGCAAGGTCGGACCGACCCAAATCAGAACACCGGAACCTCGATCCACAACTGCACCATCAAGGCGACTCCGGAGCTTGCCGCGAACCCCGCCACGAAGAGCTACTTAGGGCGGCCGTGGAAGGAATATTCTCGAACAGTTTACATGCAGTCGTTCATAGATGCGTTTATTGATCCTGCAGGCTGGAAGGAGTGGGACGGCACTTTGAATTTGAACACTTCATATTACGCTGAGTTTAATAACTCAGGGCCGGGCTCCGACACTTCACGGCGGGCTCCGTGGGTGGTCGGTGTCATCAACGCTACCGTTGCTAATAGCTTCACGGTGTCTCAATTCTTGGCCGGAGATCAATGGCTGCCGCCCACCGCCGTGCCCTACACTGGCGGTTTGATATCATAA 1668 50.42 MVSSNSISLLTFLTFLFLLPSSFSAVVPTTEICRSTTFPSFCNAFLPNSPASVHSHCRFTLHHALTHAQTFLALVDAHLSLFPFPSALHDCRSLAEANLDYITQTFSIVNSTSVALPYYQAHEMMSLMSAMITNENTCYEGLAGLGSAIGLVDKVLEAISFDRKLYSLYLSLFKMGWVSKNMKAPILPKMNHFGVGKGQLKLKMSPKDRAYYERLVHSKKPAAARRLLQTNYENDGILVNGVVAVDQNGTYDFTNISAAIAAAPDKTTVTKGYFLIFVTAGIYNETVLVPKNKRYVLLIGEGNNQTIINGNKNVVDGSTTFNSATVAVEGTGFFGVNLTISNTAGPAKHQAVALRVSADNATLYSCIFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYARLPLSGQFNALTAQGRTDPNQNTGTSIHNCTIKATPELAANPATKSYLGRPWKEYSRTVYMQSFIDAFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRAPWVVGVINATVANSFTVSQFLAGDQWLPPTAVPYTGGLIS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 58657033 58659899 - XM_039046925.1 Bhi10g02285 48626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02285 555 PANTHER PECTINESTERASE 21 553 - -
Bhi10g02285 555 PANTHER PECTINESTERASE 21 553 - -
Bhi10g02285 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 175 IPR035513 -
Bhi10g02285 555 Gene3D - 241 555 IPR012334 -
Bhi10g02285 555 Pfam Plant invertase/pectin methylesterase inhibitor 31 145 IPR006501 GO:0004857
Bhi10g02285 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599|GO:0042545
Bhi10g02285 555 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Bhi10g02285 555 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Bhi10g02285 555 CDD PMEI-like_3 32 177 - -
Bhi10g02285 555 SMART PMEI_2 24 172 IPR006501 GO:0004857
Bhi10g02285 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02492 Bhi-Chr9:67412350 Bhi10g02285 Bhi-Chr10:58657033 0 dispersed
Bhi09g02493 Bhi-Chr9:67412351 Bhi10g02285 Bhi-Chr10:58657033 0 dispersed
Bhi10g02285 Bhi-Chr10:58657033 Bhi01g01220 Bhi-Chr1:24957552 1.62E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02285 K01051 - csv:101216984 950.658