Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02332 TACTCATTATCAAGATCAAAACAATTACTCTCTATAAGTACTTATACTTATAGAGACTAATATCGAAAAATTATTTTTTAGATAAAAGAGAAAAAAACGTATAGAGTTGACAAAAAGAAAAGGAGAGAAGTGTATAAAGAAAAGAAAAGAAAAGAGTAGGATGACATATGGGAATTGGAAATTGGGGAGTACCTTTGACTCTCTGCCTTTAAACCTTTCTTCCTCTGTTCTCAACATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCCTCCTTCCACTTTCTCTTTCCCATCAACAATTTACAGTTCATCGCCATGGTCAGGCCGCACGATCTCTTCATCAATGTTCCCACTCACTTCCTTTGCCCAATTTCTCTCGACCTCATGCAATCTCCCGTCACTTTAACCACCGGCATCACCTACGACCGCTCCAGCATCCAGCACTGGCTCGACTCCGGCCATAATACTTGCCCTGCCACCATGCAGGTCCTCCACAACTACGACCTCGTTCCCAATTCTAGTCTCAAGCGACTCATTCAGATTTGGTCCGATTCTCTTCTCGACCTCTCCCAATCGGATCATATTCTAACCCTCGTCGACGATTTGCACACAAACCGAAATGGCTCTGTTTCTCTTTCTGTATCTGCTTCTCTCTCGAAGCTACTCTGTTTCGGTGCACGATTGGAGCAGAACGTCAAGTTTCTCGGGAGGATTCACGGCTTTGTACCGGTGCTTCTCGATGTTCTTCGTTGTAGAGATGTTGATTGTTCGGAACTGGTGGTTAGGGTTTTGGATTTAGTGAGATGCGAAATTGTGGATCGGGAGGAGTTTATGAACATGATGTTGAAAAGCGATCGCGATTGTTTGAGATCTCTGGTTCTCGTTCTACAGCGAGGAAGTTCGGAATCGCGAATTGGAACGGCGAGGCTTCTCGAGTGCGTCGCCATTAACGCCGAGTCAAAGAACCTAATCGCGGAAAACGAAGGGATTCTACACGAATTGATAGGAGTAATCGGAATAGACGAAGATCCAAAAGTAATCGAATCGGTACTCTCATGCTTAATCGCAATATCAATGCCGAAACGAGTAAAAATCAAGTTGGTTCGACTAGGGGTAATAAAAGCCCTAACCAGACTGCTGAAGCACCGGAACGTGAGCGTGGAAATAACGGAGAAGGTTCTGAGACTGTTGGCGGCGGCGGCGGCGGTGGAGGAAGGGCGGTCGGAGATGTTGGAGAACGGAGGAGAATGCGTGGGGAGGATGGTGAGGAAAGTGATGAAGGTGTCGAGTGCGGCGACGGAGCACGCGGTGACCGCGCTGTGGTGCATATGCTATTTGTTCCGGGAAGAGAAGGCGGCGGAGGCGGTGGCGGAGGCGAAAGGGGTTGAGAATATACTGTTGCTGATGCAAAGCCACTGCCCGGCGACGGTCAGGCAAATGGCGAAAGATCTTCTAGAGATTTTGAAGGTTAATTCCATCTCCTATTGCTTATCAATTTATGATACTGCCAATTTTTACATTATGCCCATTTGAATTTAAGTCTAAATTATAATCATTAACTAACACTTATCATTACGCTGTTAATTAATTAATTAATTAATTAATCCAACACTTTGTGCTAAATTGTTCATATAAAAACGTAGAGAGGCTGAAGAAAGTGATGTGATTCAAAGGGTTGATTTGTAAATTTTAATATCATTTTTTTCAAGTGAATAAAAAGTTGGGATTCATTTTA 1738 43.79 MVRPHDLFINVPTHFLCPISLDLMQSPVTLTTGITYDRSSIQHWLDSGHNTCPATMQVLHNYDLVPNSSLKRLIQIWSDSLLDLSQSDHILTLVDDLHTNRNGSVSLSVSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIVDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEGILHELIGVIGIDEDPKVIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNVSVEITEKVLRLLAAAAAVEEGRSEMLENGGECVGRMVRKVMKVSSAATEHAVTALWCICYLFREEKAAEAVAEAKGVENILLLMQSHCPATVRQMAKDLLEILKVNSISYCLSIYDTANFYIMPI 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 60735420 60737157 + XM_039045810.1 Bhi10g02332 48673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02332 405 ProSiteProfiles U-box domain profile. 10 84 IPR003613 GO:0004842|GO:0016567
Bhi10g02332 405 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 266 310 IPR000225 GO:0005515
Bhi10g02332 405 CDD RING-Ubox_PUB 15 57 IPR045210 -
Bhi10g02332 405 SMART Ubox_2 14 77 IPR003613 GO:0004842|GO:0016567
Bhi10g02332 405 SUPERFAMILY RING/U-box 6 78 - -
Bhi10g02332 405 SUPERFAMILY ARM repeat 176 395 IPR016024 -
Bhi10g02332 405 Pfam U-box domain 11 78 IPR003613 GO:0004842|GO:0016567
Bhi10g02332 405 PANTHER WDSAM1 PROTEIN 5 404 IPR045185 GO:0061630
Bhi10g02332 405 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED 5 404 - -
Bhi10g02332 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 81 IPR013083 -
Bhi10g02332 405 Gene3D - 170 390 IPR011989 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g01378 Bhi10g02332 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01378 Bhi-Chr3:28503564 Bhi10g02332 Bhi-Chr10:60735420 3.42E-127 dispersed
Bhi10g02332 Bhi-Chr10:60735420 Bhi10g00192 Bhi-Chr10:4173822 2.82E-33 dispersed
Bhi10g02332 Bhi-Chr10:60735420 Bhi09g03206 Bhi-Chr9:82258321 5.23E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02332 - - csv:101221867 604.364