Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02341 TTTTACTTAGCTTTATAGAGGCAATGAAATTGAAGAAGGTAAGGAAAGGAAGGAAAATAATGGCGGATGTGAAGCTTTGAAGCCAAGAGTGAGCAATGGAATCCCATCTCTTAATATCCTGTTCCTCCAATTTACCCTTTACCGACATCTTCACAGAACCCTAGAATTTTTTTTTTTTTTTTAAAAAAAAAATTACATCTCTTCTTTTTCAACTGTTTTTTTTTTTTTGCCGTAAGCTGTAAAATTCCTGTAACTGATGCTGGAAATTTCGCCTTCGCCGGAAAACTCTACCCCCACCGCCGCTGCCGTCGTGAACCGGGCCGCCGAGGAAGACGGTGCAGCAGCCTCTGCCGGACTTTCCGAGGAAACTGACCGGAACTGGCCAGGTAATCGGTGGCCGCGAGAGGAGACTATGGCTTTGTTGAAGGTGCGGTCGAGTATGGATACTGCGTTCAGGGATGCAAGCTTGAAAGCTCCTCTATGGGAAGAAGTTTCCAGGAAATTGGCTGAGCTTGGGTATAATCGAAATGCGAAAAAATGCAAAGAGAAGTTTGAGAACATTTATAAGTATCATAAAAGAACTAAAGATGGTAGATCTGGGAAAGCGAATGGGAAAAATTATAGGTATTTTGAGCAATTAGAAGCTTTTGATAATCATCCATTGCTTCCCTCTCAAGCTGATTCAATGGAAGAAATCCCAAGGATTATCCCAAACAATGTTGTTCACAATGCAATTCCATGTTCCGTAGTAACCCCGGGTGCGAATTTTGTTGAGACTACCACCACTTCGATATCGACGTCGACCACGTCTTGTTCGAGTAAAGAATCGGGTGGGACGAGGAAGAAGAAGAGGAAGTTTGTGGAGTTCTTTGAGAGGTTAATGAACGAGGTGATTGAGAAGCAGGAGAAATTGCAAAAGAAGTTTGTGGAGGCATTGGAGAAGTGTGAAGTGGAGAGGTTAGCTAGAGAAGAAGAATGGAAGATGCAAGAATTAGCTCGAATCAAGAAAGAGCGAGAGCGTTTGAATCAAGAGAGATCGATTGCGGCTGCAAAGGATGCAGCTGTTCTTTCATTCTTGAAGGTTTTCTCTGAACAGGTGGGCACAGTGCAGTTTCCTGAGAACTTGATTTTGATGGAGAATTTGACTGAGAAGCAAGATGATGGTAATGTTGACAGAAATACAAGCACTCGAGAGAATATCAACAATGGTAATTCGAGTCAGATTAGCTCATCTCGATGGCCGAAAGAAGAGATAGATGCTCTGATTCAGCTTAGGACTAGTCTGCAGATGAAATACCAGGATAATGGCCCTAAAGGTCCTCTCTGGGAGGAAATATCACTAGCCATGAAGAAACTTGGGTATGATAGAAATGCAAAGAGGTGTAAAGAGAAATGGGAGAACATCAACAAATACTTCAAAAGAGTAAGGGAAAGCAACAAAAAGCGACCCGAGGATTCAAAGACATGCCCTTATTTCCAGCAGCTCGACGCATTGTACAAACAGAAATCCAAGAAAATCATCAACAATCCAACCAATCCAAATTACGAACTAAAACCCGAGGAACTATTGATGCACATGATGGGCGGCCAAGAAGAAAGCCACCAGCCCGAATCAGCAACAGACGACGGCGATCAGAACCAAGAAGATGAAGTCGAAGGCGAAGGCGAAGATGAAGACGAGGACTATCAGATTGTAGCCAACAACAGCAATAATCAAATGGAAGTTAACTAGCAAAGGGCTCAAATGTGGCATTCTATTCTTGCAATCTCACAAGGTGGTAAAAAGGTCAGATCCTTCAACTCTACTACAAAAAGAAGTCAACTAGAGTGTAGCTTAATTGGCATAGTACTCGTACTATCGACCTCGAGGTCTGAGGTTCGATTCTCCCACCCCACACTTTAATTACAATACCTTTGCAAAAAAAAAAAAATACTACAAAAAGAAATGAAACTTCATGGGAATTGGAATCTGTCTGTCTATATATATTATGTATATCTTTCTTTATTTCTTGAATAGATGATGATACTTGTAGGCTAGAGAGAGAGAGAATAAGAGGGGGGGACTTTGAATTGTTTATTGTGTGCAAAAGTTGAAAGATGTTTGTTTGCTCCATGTTTGTTTGTCTCTGTATCAATAAAGAAAAAACCAGCATTATTTTGCTGTTGCAGGTGTTGGTAAAATTCTGTAGTAAGCCTGTTTAATGATATAATGCAAAAGTTTCCATT 2226 41.06 MLEISPSPENSTPTAAAVVNRAAEEDGAAASAGLSEETDRNWPGNRWPREETMALLKVRSSMDTAFRDASLKAPLWEEVSRKLAELGYNRNAKKCKEKFENIYKYHKRTKDGRSGKANGKNYRYFEQLEAFDNHPLLPSQADSMEEIPRIIPNNVVHNAIPCSVVTPGANFVETTTTSISTSTTSCSSKESGGTRKKKRKFVEFFERLMNEVIEKQEKLQKKFVEALEKCEVERLAREEEWKMQELARIKKERERLNQERSIAAAKDAAVLSFLKVFSEQVGTVQFPENLILMENLTEKQDDGNVDRNTSTRENINNGNSSQISSSRWPKEEIDALIQLRTSLQMKYQDNGPKGPLWEEISLAMKKLGYDRNAKRCKEKWENINKYFKRVRESNKKRPEDSKTCPYFQQLDALYKQKSKKIINNPTNPNYELKPEELLMHMMGGQEESHQPESATDDGDQNQEDEVEGEGEDEDEDYQIVANNSNNQMEVN 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 61055848 61058350 + XM_039045786.1 Bhi10g02341 48682

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02341 491 MobiDBLite consensus disorder prediction 301 327 - -
Bhi10g02341 491 MobiDBLite consensus disorder prediction 1 47 - -
Bhi10g02341 491 Pfam Myb/SANT-like DNA-binding domain 326 413 IPR044822 -
Bhi10g02341 491 Pfam Myb/SANT-like DNA-binding domain 45 130 IPR044822 -
Bhi10g02341 491 CDD GT1 45 110 - -
Bhi10g02341 491 SMART sant 324 386 IPR001005 -
Bhi10g02341 491 SMART sant 43 105 IPR001005 -
Bhi10g02341 491 ProSiteProfiles Myb-like domain profile. 320 384 IPR001005 -
Bhi10g02341 491 MobiDBLite consensus disorder prediction 309 327 - -
Bhi10g02341 491 MobiDBLite consensus disorder prediction 457 478 - -
Bhi10g02341 491 Coils Coil 202 229 - -
Bhi10g02341 491 PANTHER - 1 488 - -
Bhi10g02341 491 Coils Coil 239 266 - -
Bhi10g02341 491 MobiDBLite consensus disorder prediction 443 491 - -
Bhi10g02341 491 MobiDBLite consensus disorder prediction 1 17 - -
Bhi10g02341 491 ProSiteProfiles Myb-like domain profile. 45 103 IPR001005 -
Bhi10g02341 491 CDD GT1 326 391 - -
Bhi10g02341 491 Gene3D - 47 108 - -
Bhi10g02341 491 Gene3D - 328 389 - -
Bhi10g02341 491 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 488 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02341 - - - cmo:103499654 843.958
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02002 Bhi-Chr4:53137553 Bhi10g02341 Bhi-Chr10:61055848 2.14E-126 dispersed
Bhi04g02003 Bhi-Chr4:53137553 Bhi10g02341 Bhi-Chr10:61055848 1.56E-16 dispersed
Bhi08g00728 Bhi-Chr8:24709553 Bhi10g02341 Bhi-Chr10:61055848 6.24E-17 dispersed
Bhi10g02341 Bhi-Chr10:61055848 Bhi12g00048 Bhi-Chr12:1024766 7.69E-18 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1234 Blo04g00970 . . . Bpe15g00395 . . . Cmo02g00617 Cmo20g01084 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma03g01036 . Sed01g3751 . . . Cma20g01075 . . Cpe05g01074 . Bhi10g02341 Tan07g0890 Cmetu09g0584 . Hepe08g1260 . . Cla02g00074 Cam02g0075 Cec02g0077 Cco02g0069 Clacu02g0073 Cmu02g0072 Cre02g0412 Lsi10g00706 . . Cme11g00078
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008720 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 2 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2272 PF13837 Myb_DNA-bind_4 1.90E-21 CL0123 Bhi TF