Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g02348 ATTTAATCACTGCGGCTGTAAGGGCCAATGGCATCAAAGGTCCTGTTCAGATTACTGCTTTTGGTGACGTTTTACAGCTCTCCAGGGCGAACCAGGAGGCTCTCTCTTCTACTGGAATTAGCCTGACCCACATTCCTCATGTGCTGCAAGCATCATGTGGCATTGGCATGCTTTGATTAGAGGGGAAAATCTAGTTGGAAGGCATTTTAATCAACCACCGGATGCTCCCTACAGTTCTTGGTACGGCCATTATAAGGTTTCTCTTGAAAGCCCATTTCCAGATAATGAGCAACCATCTTCTTTACGAACTGAGGAGGTTTTTGAGCCCAGTGCAGATCCTAAGCCTCGTCCCATTCCAAATACAGTCATTAGGCAAATACATAACATTTTGAAATTGTATCCCAAAGGACTCCTCATTACAGAACTCCGCTCAGAGTTGGGAAAGAGTCCTATATCTATGGATAGGGACTTTTATGGTTACAAAAAGTTTTCTCGCTTTCTTTTGTCAATGCCACACATTTTAAAGCTTCAAACAAATGATGATGGCCAATTTATTGCCTGTATGGTCACTCCAAAGCGGCCCAAAGAACCATTAGGGTCCAGTAGAGGTACATCTGTTAATGGCACTGAAAAGCAGGACCCTAATCTGATAGCGAAGTTAAATAATAATGTTTCCTCAACAGAATCGACGTGTGTACCAGTCCTTCCATCCAATGCCCAAGACAAACCATTGAAGGTGAAACCATCTTCCAAATTTGGTAAGCCTATTAGTCTAGCCATGGAAGGGGAATCATCAAGATGCCCGGTTTTGGAGCCACATGTTATAGAAGATTCAAAGCAAACCAGTAAATTTGAAGGCAACAGTAATATGACTCTTTCAATTGAACAGCATTCTAAGGCCAAGACAAGTTTTTTGAGTAGAATATGGAGAAGGCTTTTAGGCAATAATGACACTAATTCTAAAAATGGAAGTCATTGTATTTCTGAAAAATGTTCTACATCAAATGATACTTCGAATCAGAAAAGTTGTAGTGGCCTTGTTGCAACTTATTCTAAGGACAGCCCTGGGGAGGCAAAAACTGATGGAAGAACTGCTATGCCAATGAGTGAAGATGCTAATTCAGTGCATCAAGTTTCAAATTCATCTGATCTCGAGTCTGCTAAGCTTCAGAAAACAGTCATAGTTGCTAATGCACATGATGATAAATCTAGTTCTAATCTAGGACTATTTGGTAGCATTAGAAATTGGCTCAAGTTTTGGGGAAAGAAAACTGAGAACGATGAAACCAGTGAGCATTGTTGTGAACAAAACCAGTTAAAGAATCAATCTGGAAAACATCATCTTTTTTCCAGCAATTCTTTTTGGCAAGACATGCAATCCTTTATGGAAACACCTAAAGGAGTTGAGATTATTTCGCGTTCAAAAACCAGGTCGGAGATAGCTCAAAATCTGCTAGTGGGAGGACCTCCCGTTCTTAAATCTTTAAGCACTAGTGATCTCTTCGACTTCTTGGAATTGTTAATATCAGATAAGAAATGGGTGGAGGAATTCCCATCTGAAACAAATCCTTTTAAGCTCACTCTCTCTATTGCTAGGAAAAGGTCTAGCACAGAACCTTTGCATCGTGCAAGTGGATTGACATCAATCTTTATGAACAAAGAGTCACAGTGCAGCTTCCAGGGATCTCGAGGACATGATTCAGATTCAGATAAGAAAAATGAAAATATTCCTCAAGCTACAACTATGACTAAAAACAAGGTTGCAGAGAGGACGAGATGCGAGATATTAGGCGACTGTCAAAAGCTTGTGGATGAGATCTTGAGGGATCACCCAGAAGGTTATAATATTGGGGCCTTCAGAAGACTGTTTTTTGAGAAGTATGGGTATCATCTTAATTTGCAAAAGCTTGGTTACCCTAAGTTGGCATCCTTGCTACAAATAATACCTGGAGTGACAATAGCGTCCACCTTTATAATTCCTACCAGTAAAGCCCCAAAAGTTTCCAAGCTGGAAACAACTCTTCTCAGTGATTATGAGAAAAACACATCTGGTACCGTAGCAAACTCCGATGATGAATCTAACCTGCCTAGAAAGGATGATGATTTTGAATCCACGTGGGAAGAATTAGGTCCAGCATGCACAGATTGTAGCAGTGAAAACAAAGCGGAATCCGCATTGAATAGTGAAACAACAGAAGCAATAGAGAAACAACCAAAATTTTGTTATGAACCTGTCCTTTCGGAGGATGAATCAACGGAAACTGATGAAGAGTCTTGTCCTGCTACAGAAGTGCCAGCGAAACAACGAGCTAATGAGGAAGAAAGTTCATTAATACAGATCCTTGATTCATGGTATAGCAGCAAAGAAAACGGTAAGAATGACAAGGCAGAAAATAGCTACGAGACGATTGATTGTTCTGAAAATAGTTCAAAGCTTTCTAGTTTAGTTCCCAAAAGTGAAGTAAATACAGGAAGCTTTGCTAGAAAGCAAAGACGTCAAAAGAGCTATTCTTTTGTATCAGACACTAATTAAAATGACAAGAAAAAGCTGATCGATGGGATTTTGGGTACCGTGAAGAAATTGAGCAAGTCCACAGATACATAACTGAATCTAGCATGATGGAAAATATAGTTCAGAACAATTTTTTTGGATCAAGTATTCATAATACCGCATCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCTTCCCGTAGGAAAATTATTATTTGTTATTTCAGTTATACTAGACAAAGATAATCCTCAGTTGTTTAGAAAGGGTTGTTGGCCCTGTAAAGTGGATGGTGGTATATTACACTATCACCCTCTGACCTTCCATTACAAGCAATTTTGATGTTTATTACCTTA 2869 39.21 MWHWHALIRGENLVGRHFNQPPDAPYSSWYGHYKVSLESPFPDNEQPSSLRTEEVFEPSADPKPRPIPNTVIRQIHNILKLYPKGLLITELRSELGKSPISMDRDFYGYKKFSRFLLSMPHILKLQTNDDGQFIACMVTPKRPKEPLGSSRGTSVNGTEKQDPNLIAKLNNNVSSTESTCVPVLPSNAQDKPLKVKPSSKFGKPISLAMEGESSRCPVLEPHVIEDSKQTSKFEGNSNMTLSIEQHSKAKTSFLSRIWRRLLGNNDTNSKNGSHCISEKCSTSNDTSNQKSCSGLVATYSKDSPGEAKTDGRTAMPMSEDANSVHQVSNSSDLESAKLQKTVIVANAHDDKSSSNLGLFGSIRNWLKFWGKKTENDETSEHCCEQNQLKNQSGKHHLFSSNSFWQDMQSFMETPKGVEIISRSKTRSEIAQNLLVGGPPVLKSLSTSDLFDFLELLISDKKWVEEFPSETNPFKLTLSIARKRSSTEPLHRASGLTSIFMNKESQCSFQGSRGHDSDSDKKNENIPQATTMTKNKVAERTRCEILGDCQKLVDEILRDHPEGYNIGAFRRLFFEKYGYHLNLQKLGYPKLASLLQIIPGVTIASTFIIPTSKAPKVSKLETTLLSDYEKNTSGTVANSDDESNLPRKDDDFESTWEELGPACTDCSSENKAESALNSETTEAIEKQPKFCYEPVLSEDESTETDEESCPATEVPAKQRANEEESSLIQILDSWYSSKENGKNDKAENSYETIDCSENSSKLSSLVPKSEVNTGSFARKQRRQKSYSFVSDTN 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 61497650 61508219 + XM_039045828.1 Bhi10g02348 48689

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g02348 792 MobiDBLite consensus disorder prediction 695 792 - -
Bhi10g02348 792 ProSiteProfiles OST-type HTH domain profile. 544 620 IPR025605 -
Bhi10g02348 792 MobiDBLite consensus disorder prediction 630 680 - -
Bhi10g02348 792 Gene3D - 68 138 IPR041966 -
Bhi10g02348 792 Gene3D - 546 605 IPR041966 -
Bhi10g02348 792 MobiDBLite consensus disorder prediction 721 736 - -
Bhi10g02348 792 Pfam OST-HTH/LOTUS domain 549 602 IPR025605 -
Bhi10g02348 792 Pfam OST-HTH/LOTUS domain 71 134 IPR025605 -
Bhi10g02348 792 MobiDBLite consensus disorder prediction 41 68 - -
Bhi10g02348 792 ProSiteProfiles OST-type HTH domain profile. 67 139 IPR025605 -
Bhi10g02348 792 CDD LOTUS 73 131 - -
Bhi10g02348 792 MobiDBLite consensus disorder prediction 666 680 - -
Bhi10g02348 792 PANTHER LIMKAIN B LKAP 1 753 IPR024768 GO:0005777|GO:0010468|GO:1903231
Bhi10g02348 792 MobiDBLite consensus disorder prediction 751 792 - -
Bhi10g02348 792 CDD LOTUS 545 603 - -
Bhi10g02348 792 MobiDBLite consensus disorder prediction 507 533 - -
Bhi10g02348 792 PANTHER EMB|CAB71880.1 1 753 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g02348 - - - cpep:111796232 1031.55
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02348 Bhi-Chr10:61497650 Bhi10g02350 Bhi-Chr10:61543698 0 dispersed
Bhi10g02347 Bhi-Chr10:61496925 Bhi10g02348 Bhi-Chr10:61497650 0 tandem
Bhi10g02348 Bhi-Chr10:61497650 Bhi10g02349 Bhi-Chr10:61542918 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1214 . Blo16g00517 . . . Bpe13g00010 . . . Cmo20g01089 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01353 . . . . Bma06g00530 . . . . Cma20g01079 . . . Cpe16g00066 Bhi10g02348 . . . . . . Cla02g00078 Cam02g0081 Cec02g0083 Cco02g0075 Clacu02g0079 Cmu02g0077 Cre02g0417 Lsi10g00700 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005338 1 4 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 39